5 research outputs found

    The mapping count table

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    This count table was used as an input for differential gene expression analysis in edge

    Table containing differential expressed genes (result of edgeR)

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    This table contains data of list of genes that were < 0.01 FDR value and differed in their expression value at least 2 fold between two group

    Sequences of S. lalandi transcriptome (fasta file)

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    Transcriptome contigs assembled from filtered paired end sequencing reads on Illumina HiSeqâ„¢ 2000 platform using Trinity. Only non-redundant (cluster in CAP3), more than 300bp contigs with open reading frame were kep

    GO term reduction table

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    Gene Ontology terms were summarized and redundant GO terms were removed by semantic similarity-based approach employed in REViGO
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