Yeast cytochrome c oxidase: a model system to study mitochondrial forms of the haem-copper oxidase superfamily.

The known subunits of yeast mitochondrial cytochrome c oxidase are reviewed. The structures of all eleven of its subunits are explored by building homology models based on the published structures of the homologous bovine subunits and similarities and differences are highlighted, particularly of the core functional subunit I. Yeast genetic techniques to enable introduction of mutations into the three core mitochondrially-encoded subunits are reviewed

A robust and parsimonious regional disaggregation method for deriving hourly rainfall intensities for the UK

International audienceA regional rainfall disaggregation method from daily to hourly intensities is presented for the entire UK, which was developed for use with regionalised hydrological and water quality models. The approach is based on the inter-dependence of the hourly rainfall intensities during a rainfall event. The analysis of 23 229 days with at least 15 mm of precipitation from 238 weather stations throughout the UK allowed regional parameters for climatically homogeneous regions of the UK to be derived for each season. The method reproduces well the main statistical characteristics of the data (mean, minimum and maximum intensity and standard deviation). The method is fully operational, computationally efficient and can be applied to any location throughout the UK

Anisotropic excitation spectrum of a dipolar quantum Bose gas

We measure the excitation spectrum of a dipolar Chromium Bose Einstein Condensate with Raman-Bragg spectroscopy. The energy spectrum depends on the orientation of the dipoles with respect to the excitation momentum, demonstrating an anisotropy which originates from the dipole-dipole interactions between the atoms. We compare our results with the Bogoliubov theory based on the local density approximation, and, at large excitation wavelengths, with numerical simulations of the time dependent Gross-Pitaevskii equation. Our results show an anisotropy of the speed of soundComment: 3 figure

Modelling spatial distributions of alpine vegetation : a graph theory approach to delineate ecologically-consistent species assemblages

This work was partly funded by the French Ministry of Ecology, Sustainable Development and Energy in support of the development of the CARHab project (2011-2015) on mapping the terrestrial habitats of France. In addition, this work benefited from a synergy with the Divgrass project (Plant Functional Diversity of Permanent Grasslands) (CESAB/FRB funded, France).Safeguarding biodiversity has been one of the most important issues on the environmental and forest policies agenda since the 1990's. The problem remains in terms of decisions and knowledge on where to set appropriate conservation targets. Hence, we need detailed and reliable information about habitat structure and composition and methods for estimating this information over the whole spatial domain. In answer to this target, in France, the Ministry of Ecology launched an ambitious project to map the terrestrial vegetation at a scale of 1:25 000 known as CarHab. This project initiated in 2011, will be used as a strategic spatial planning tool in answer to key issues in relation to biodiversity, conservation, green infrastructures and to report on the conservation status of habitats and species of community interest. We use species-distribution models (SDMs) to identify areas that are ecologically suitable for the presence of species based on specific habitat characteristics. Available techniques using graph theory enable identification of groups of species (assemblages) based on ecological affinities. Species co-occurrences (present within the same assessment plot), revealing a shared ecological niche, are analysed using algorithms derived from graph theory in order to define different nodes of species affinities. Thus, the resulting assemblages are based on ecological similarities. Hence, these assemblages are used to develop models of the potential distribution of alpine vegetation communities. The BIOMOD platform is used to facilitate the simultaneous implementation of different modelling approaches that can be compared in order to choose the most suitable and accurate for each species assemblage obtained from graph theory. Using the different relevant spatially explicit results provides a more comprehensive vision of the communities' spatial distributions.PostprintPeer reviewe

Sur lʼorigine morphologique des écoulements par lʼanalyse dʼobservations hydrologiques distribuées. Application à deux bassins versants cévenols (Gard, France)

Cet article se propose d’étudier les relations qu’entretient la morphologie des bassins et de leurs réseaux hydrographiques avec les débits survenant lors des crues. Des descripteurs morphologiques issus de l’analyse de modèle numérique de terrain (MNT) par un algorithme original sont confrontés à des mesures de débits effectuées sous épisodes et spatialement distribuées à l’intérieur de deux bassins expérimentaux situés au sein du bassin du Gardon d’Anduze (Gard). Les résultats montrent l’influence des surfaces drainées sur les débits mesurés et font apparaître deux types de fonctionnement des réseaux hydrographiques : un fonctionnement de type réseau principal, dans lequel les débits observent une relation puissante avec les surfaces drainées, et un fonctionnement de type réseau secondaire, dans lequel les débits ne peuvent être expliqués ni par la surface drainée ni par les descripteurs morphologiques étudiés. Ces résultats font ainsi apparaître la distinction entre des fonctionnements de type versant et de type réseau. Ils mettent également en avant les différences entre les deux bassins expérimentaux étudiés, notamment la variabilité spatiale des deux types de fonctionnements et l’influence prédominante de la géologie et de la pédologie des sites sur les mécanismes de mise en eau des réseaux hydrographiques

Control of dipolar relaxation in external fields

We study dipolar relaxation in both ultra-cold thermal and Bose-condensed chromium atom gases. We show three different ways to control dipolar relaxation, making use of either a static magnetic field, an oscillatory magnetic field, or an optical lattice to reduce the dimensionality of the gas from 3D to 2D. Although dipolar relaxation generally increases as a function of a static magnetic field intensity, we find a range of non-zero magnetic field intensities where dipolar relaxation is strongly reduced. We use this resonant reduction to accurately determine the S=6 scattering length of chromium atoms: $a_6 = 103 \pm 4 a_0$. We compare this new measurement to another new determination of $a_6$, which we perform by analysing the precise spectroscopy of a Feshbach resonance in d-wave collisions, yielding $a_6 = 102.5 \pm 0.4 a_0$. These two measurements provide by far the most precise determination of $a_6$ to date. We then show that, although dipolar interactions are long-range interactions, dipolar relaxation only involves the incoming partial wave $l=0$ for large enough magnetic field intensities, which has interesting consequences on the stability of dipolar Fermi gases. We then study ultra-cold chromium gases in a 1D optical lattice resulting in a collection of independent 2D gases. We show that dipolar relaxation is modified when the atoms collide in reduced dimensionality at low magnetic field intensities, and that the corresponding dipolar relaxation rate parameter is reduced by a factor up to 7 compared to the 3D case. Finally, we study dipolar relaxation in presence of radio-frequency (rf) oscillating magnetic fields, and we show that both the output channel energy and the transition amplitude can be controlled by means of rf frequency and Rabi frequency.Comment: 25 pages, 17 figure

Radial orbit instability: review and perspectives

This paper presents elements about the radial orbit instability, which occurs in spherical self-gravitating systems with a strong anisotropy in the radial velocity direction. It contains an overview on the history of radial orbit instability. We also present the symplectic method we use to explore stability of equilibrium states, directly related to the dissipation induced instability mechanism well known in theoretical mechanics and plasma physics.Comment: 10 pages, submitted to Transport Theory and Statistical Physics, proceedings of Vlasovia 2009 International Conference. Corrected for typos, redaction, and references adde

The Radius of Metric Subregularity

There is a basic paradigm, called here the radius of well-posedness, which quantifies the "distance" from a given well-posed problem to the set of ill-posed problems of the same kind. In variational analysis, well-posedness is often understood as a regularity property, which is usually employed to measure the effect of perturbations and approximations of a problem on its solutions. In this paper we focus on evaluating the radius of the property of metric subregularity which, in contrast to its siblings, metric regularity, strong regularity and strong subregularity, exhibits a more complicated behavior under various perturbations. We consider three kinds of perturbations: by Lipschitz continuous functions, by semismooth functions, and by smooth functions, obtaining different expressions/bounds for the radius of subregularity, which involve generalized derivatives of set-valued mappings. We also obtain different expressions when using either Frobenius or Euclidean norm to measure the radius. As an application, we evaluate the radius of subregularity of a general constraint system. Examples illustrate the theoretical findings.Comment: 20 page