An MT-Style Optical Package for Optical Data Transmission

An optical package for mounting VCSEL and PIN diodes for transmitting and receiving optical signals has been developed. The diodes couple to the fibers in a commercial MT connector. The package is quite compact with its physical size significantly smaller than that of the MT connector. This design simplifies the testing and assembly of the optical components because the MT connector with the long fibers attached can be remounted with ease while preserving good light coupling efficiency.Comment: Submitted to NI

Incorporation of the statistical uncertainty in the background estimate into the upper limit on the signal

We present a procedure for calculating an upper limit on the number of signal events which incorporates the Poisson uncertainty in the background, estimated from control regions of one or two dimensions. For small number of signal events, the upper limit obtained is more stringent than that extracted without including the Poisson uncertainty. This trend continues until the number of background events is comparable with the signal. When the number of background events is comparable or larger than the signal, the upper limit obtained is less stringent than that extracted without including the Poisson uncertainty. It is therefore important to incorporate the Poisson uncertainty into the upper limit; otherwise the upper limit obtained could be too stringent.Comment: 14 pages, 4 figure

Review of Rare and Forbidden τ\tau Decays

This is a review of rare and forbidden decays of the $\tau$ lepton. For the rare decays, this includes new results on the chiral anomaly decay \taupietapio, new upper limits on the second-class-current decay \taupieta, and the observations of the Cabibbo-suppressed decay \tauketa and the internal conversion decay \taueee. For the forbidden decays, there are new upper limits on the radiative decays \tauegamma and \taumugamma. Some forbidden decays which have not been previously searched for are also suggested

Optical Link of the Atlas Pixel Detector

The on-detector optical link of the ATLAS pixel detector contains radiation-hard receiver chips to decode bi-phase marked signals received on PIN arrays and data transmitter chips to drive VCSEL arrays. The components are mounted on hybrid boards (opto-boards). We present results from the irradiation studies with 24 GeV protons up to 32 Mrad (1.2 x 10^15 p/cm^2) and the experience from the production.Comment: 9th ICATPP Conference, Como, Ital

Knowledge-based energy functions for computational studies of proteins

This chapter discusses theoretical framework and methods for developing knowledge-based potential functions essential for protein structure prediction, protein-protein interaction, and protein sequence design. We discuss in some details about the Miyazawa-Jernigan contact statistical potential, distance-dependent statistical potentials, as well as geometric statistical potentials. We also describe a geometric model for developing both linear and non-linear potential functions by optimization. Applications of knowledge-based potential functions in protein-decoy discrimination, in protein-protein interactions, and in protein design are then described. Several issues of knowledge-based potential functions are finally discussed.Comment: 57 pages, 6 figures. To be published in a book by Springe

Thermodynamics of Large-N_f QCD at Finite Chemical Potential

We extend the previously obtained results for the thermodynamic potential of hot QCD in the limit of large number of fermions to non-vanishing chemical potential. We give exact results for the thermal pressure in the entire range of temperature and chemical potential for which the presence of a Landau pole is negligible numerically. In addition we compute linear and non-linear quark susceptibilities at zero chemical potential, and the entropy at small temperatures. We compare with the available perturbative results and determine their range of applicability. Our numerical accuracy is sufficiently high to check and verify existing results, including the recent perturbative results by Vuorinen on quark number susceptibilities and the older results by Freedman and McLerran on the pressure at zero temperature and high chemical potential. We also obtain a number of perturbative coefficients at sixth order in the coupling that have not yet been calculated analytically. In the case of both non-zero temperature and non-zero chemical potential, we investigate the range of validity of a scaling behaviour noticed recently in lattice calculations by Fodor, Katz, and Szabo at moderately large chemical potential and find that it breaks down rather abruptly at $\mu_q \gtrsim \pi T$, which points to a presumably generic obstruction for extrapolating data from small to large chemical potential. At sufficiently small temperatures $T \ll \mu_q$, we find dominating non-Fermi-liquid contributions to the interaction part of the entropy, which exhibits strong nonlinearity in the temperature and an excess over the free-theory value.Comment: 18 pages, 7 figures, JHEP style; v2: several updates, rewritten and extended sect. 3.4 covering now "Entropy at small temperatures and non-Fermi-liquid behaviour"; v3: additional remarks at the end of sect. 3.4; v4: minor corrections and additions (version to appear in JHEP