7 research outputs found

    Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1.

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    In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to provide realistic and reasonable critiques of reports that are focused on these processes. These guidelines are not meant to be a dogmatic set of rules, because the appropriateness of any assay largely depends on the question being asked and the system being used. Moreover, no individual assay is perfect for every situation, calling for the use of multiple techniques to properly monitor autophagy in each experimental setting. Finally, several core components of the autophagy machinery have been implicated in distinct autophagic processes (canonical and noncanonical autophagy), implying that genetic approaches to block autophagy should rely on targeting two or more autophagy-related genes that ideally participate in distinct steps of the pathway. Along similar lines, because multiple proteins involved in autophagy also regulate other cellular pathways including apoptosis, not all of them can be used as a specific marker for bona fide autophagic responses. Here, we critically discuss current methods of assessing autophagy and the information they can, or cannot, provide. Our ultimate goal is to encourage intellectual and technical innovation in the field

    Evidence for a differentiated chromosomal race north of classical south European refuge areas in the garden dormouse Eliomys quercinus

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    The dormouse Eliomys quercinus is a forest rodent undergoing long periods of winter hibernation. The species presents a surprisingly large diversity of chromosomal races, which geographic distribution was shown recently to predate the Pleistocene glaciations. Previously reported data on the karyotypes of the garden dormouse in France come from the northeast of the country, where the 2N050 race occurs. New data are presented from specimens trapped near the Atlantic coast (departments of Vendée and Charente-Maritime), in the Pyrenees, the Alps and in the Massif Central. The French Alpine chain, close to the Italian border, is inhabited by the 2N054 race. A karyotype with 2N048 chromosomes, of Iberian type, is found north of the Pyrenees, near the central Atlantic coast and also in the south of the Massif Central, whereas the 2N050 race occurs in the north of the massif. A hybrid between these two races (2N049) was found in Vendée. These facts reveal that neither the Pyrenees nor the Alps constitute a biogeographic barrier to the dormouse and strongly suggest that the present population of northern France derives from a postglacial recolonisation movement initiated in the southernmost regions of France or in the Rhône valley.project no. POCTI/BSE/36626/9
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