Intercalibrating the national classifications of ecological status for Northern rivers: Biological Quality Element: Macrophytes

The European Water Framework Directive (WFD) requires the national classifications of good ecological status to be harmonised through an intercalibration exercise. In this exercise, significant differences in status classification among Member States are harmonized by comparing and, if necessary, adjusting the good status boundaries of the national assessment methods. Intercalibration is performed for rivers, lakes, coastal and transitional waters, focusing on selected types of water bodies (intercalibration types), anthropogenic pressures and Biological Quality Elements. Intercalibration exercises were carried out in Geographical Intercalibration Groups - larger geographical units including Member States with similar water body types - and followed the procedure described in the WFD Common Implementation Strategy Guidance document on the intercalibration process (European Commission, 2011). The Technical reports are organized in volumes according to the water category (rivers, lakes, coastal and transitional waters), Biological Quality Element and Geographical Intercalibration group. This volume addresses the intercalibration of the Northern River GIG Macrophyte ecological assessment methods. Three countries (Finland, Norway, Sweden) participated in the intercalibration exercise and harmonised their river macrophyte systems. The results were approved by the WG ECOSTAT and included in the EC Decision on intercalibration (European Commission, 2018).JRC.D.2-Water and Marine Resource

Rewilding wetlands: beaver as agents of within-habitat heterogeneity and the responses of contrasting biota

Ecosystem engineers can increase biodiversity by creating novel habitat supporting species that would otherwise be absent. Their more routine activities further influence the biota occupying engineered habitats. Beavers are well-known for transforming ecosystems through dam building and are therefore increasingly being utilised for habitat restoration, adaptation to climate extremes, and in long term rewilding. Abandoned beaver ponds develop into meadows or forested wetlands that differ fundamentally from other terrestrial habitats and thus increase landscape diversity. Active beaver ponds, by contrast, are superficially similar to other non-engineered shallow wetlands, but ongoing use and maintenance might affect how beaver ponds contribute to aquatic biodiversity. We explored the 'within-habitat' effect of an ecosystem engineer by comparing active beaver ponds (BP) in southern Sweden with coexisting other wetlands (OW), using sedentary (plants) and mobile (water beetles) organisms as indicators. BP differed predictably from OW in environmental characteristics and were more heterogeneous. BP supported more plant species at plot (+15%) and site (+33%) scales, and plant beta diversity, based on turnover between plots, was 17% higher than in other wetlands (OW), contributing to a significantly larger species pool in BP (+17%). Beetles were not differentiated between BP and OW based on diversity measures but were 26% more abundant in BP. Independent of habitat creation beaver are thus significant agents of within-habitat heterogeneity that differentiates beaver ponds from other standing water habitat; as an integral component of the rewilding of wetlands re-establishing beaver should benefit aquatic biodiversity across multiple scales

A long-established invasive species alters the functioning of benthic biofilms in lakes

Invasive species often transform environmental conditions, exclude native species and alter ecosystem functioning, including key ecosystem processes underpinning nutrient and energy cycles. However, such impacts have been most documented during periods of invasive species dominance; their influences on functioning at lower relative abundances and after long-term establishment are less well-known.We investigated the effects of Elodea canadensis, a macrophyte native to North America with a long invasion history in many regions of the world, on the biomass accrual and metabolism of littoral zone biofilms growing on organic and inorganic substrates.We deployed nutrient diffusing substrates (NDS) in 18 replicate transects distributed across six lakes, comprising three invaded by E. canadensis and three uninvaded reference lakes. NDS were amended with nitrogen (N), phosphorus (P) or N + P together, or were deployed as unamended controls. E. canadensis relative abundance varied widely in the invaded transects, ranging from 13% to 93% of all macrophyte cover.On control substrates, algal biomass, quantified as Chlorophyll-a, and gross primary production (GPP) were 42% and 78% greater in the invaded compared to uninvaded lakes, respectively. Respiration rates, attributable to responses of both autotrophs and heterotrophs, were 45% greater on control substrates in invaded lakes. By contrast, N-limitation of both biofilm GPP and respiration was 25% and 35% greater in uninvaded compared with invaded lakes.There was no evidence for differences in nutrients, light availability or grazing pressure between invaded and uninvaded transects. Rather, the observed differences in metabolism suggest that the presence of E. canadensis increases availability of N at local scales, reducing N-limitation of biofilms and resulting in elevated rates of biofilm productivity.Our results demonstrate that invasive elodeids might have significant impacts on biofilms and processes associated with the cycling of nutrients, even when long-established and present at lower relative abundances

Consequences of migratory coupling of predators and prey when mediated by human actions

Aim Animal migrations influence ecosystem structure, dynamics and persistence of predator and prey populations. The theory of migratory coupling postulates that aggregations of migrant prey can induce large-scale synchronized movements in predators, and this coupling is consequential for the dynamics of ecological communities. The degree to which humans influence these interactions remains largely unknown. We tested whether creation of large resource pulses by humans such as seasonal herding of reindeer Rangifer tarandus and hunting of moose, Alces alces, can induce migratory coupling with Golden Eagles, Aquila chrysaetos, and whether these lead to demographic consequences for the eagles. Location Fennoscandia. Methods We used movement data from 32 tracked Golden Eagles spanning 125 annual migratory cycles over 8 years. We obtained reindeer distribution data through collaboration with reindeer herders based on satellite tracking of reindeer, and moose harvest data from the national hunting statistics for Sweden. We assessed demographic consequences for eagles from ingesting lead from ammunition fragments in moose carcasses through survival estimates and their links with lead concentrations in eagles' blood. Results In spring, eagles migrated hundreds of kilometres to be spatially and temporally coupled with calving reindeer, whereas in autumn, eagles matched their distribution with the location and timing of moose hunt. Juveniles were more likely to couple with reindeer calving, whereas adults were particularly drawn to areas of higher moose harvest. Due to this coupling, eagles ingested lead from spent ammunition in moose offal and carcasses and the resulting lead toxicity increased the risk of mortality by 3.4 times. Main conclusions We show how migratory coupling connects landscape processes and that human actions can influence migratory coupling over large spatial scales and increase demographic risks for predators. We provide vital knowledge towards resolving human-wildlife conflicts and the conservation of protected species over a large spatial and temporal scale

Disentangling the roles of plant functional diversity and plaint traits in regulating plant nitrogen accumulation and denitrification in freshwaters

1. There is a growing recognition that functional measures of diversity, based on quantification of functionally important species traits, are useful for explaining variation in ecosystem processes. However, the mechanisms linking functional diversity to different processes remain poorly understood, hindering development of a predictive framework for ecosystem functioning based on species traits.2. The current understanding of how the functional traits of aquatic plants (macrophytes) affect nitrogen (N) cycling by regulating microbial communities and their activity in freshwater habitats is particularly limited. Denitrifying bacteria are typically associated with the roots of both aquatic and terrestrial plants and denitrification is the main cause of loss of N from ecosystems. Disentangling the interplay between plants and microbial denitrifiers is key to understanding variation in rates of denitrification from local to landscape scales.3. In a mesocosm experiment, we varied the species richness (monocultures or two-species mixtures) and composition of macrophytes. We quantified effects of both macrophyte functional diversity, quantified as functional trait dissimilarity, and functional trait composition, quantified as community weighted mean trait values, on N removal in wetlands. We used structural equation modelling to disentangle the direct and indirect influences of traits on N accumulation in plant biomass, denitrification activity and abundance of key bacterial denitrification genes (nirS and nirK).4. Both functional diversity and functional trait composition regulated N removal, explaining 70%-94% variation in the underlying ecosystem processes. Increased macrophyte functional diversity increased plant N accumulation, and indirectly enhanced denitrification by increasing denitrification gene abundance. Among traits, greater plant relative growth rates, specific leaf area and above-ground biomass increased plant N accumulation. Denitrification activity increased with increasing below-ground biomass but decreased with increasing root diameter.5. These findings improve our understanding of N removal in freshwater wetlands dominated by macrophytes, and have broad ecological implications for wetland management targeting enhanced ecosystem services. Our results highlight the potential for optimizing denitrification and plant N accumulation in wetlands and thereby improving water purification by increasing macrophyte functional diversity and ensuring the presence of key traits in macrophyte assemblages

Assessing pollution in the Kola river, northwestern Russia, using metal concentrations in water and bryophytes

Intensive Cu-Ni and Fe mining and smelting in northwestern Russia constitutes a potential risk of pollution in the Kola River. We assessed the degree of pollution along the Kola River by means of overall water quality evaluation and analysis of metals in water samples (dissolved and particulate fractions) and aquatic mosses. The observed pollutant levels were compared with those in the unpolluted reference rivers. The results indicate relatively low overall contamination in the Kola River, although Cu and Ni levels are elevated relative to the reference data. Furthermore, PCA ordination models identified clear metal concentration patterns along the river. Al, Cd, Co, Fe, Pb and Zn exhibited an almost continuous increase from the headwaters to the river mouth, whereas As, Ba, Cu, Mn and Ni showed their highest concentrations in the headwaters, close to the mining areas, relatively low concentrations in the middle parts of the river and elevated concentrations at the river mouth. Bryophyte analysis appeared to be more sensitive tool for metal pollution assessment than metal concentrations in the river

Exploring the influence of host community composition on the outbreak potential of Anaplasma phagocytophilum and Borrelia burgdorferi s.l.

In large parts of the northern hemisphere, multiple deer species coexist, and management actions can strongly influence wild deer communities. Such changes may also indirectly influence other species in the community, such as small mammals and birds, because deer can have strong effects on their habitats and resources. Deer, small mammals and birds play an important role in the dynamics of tick-borne zoonotic diseases. It is, however, relatively underexplored how the abundance and composition of vertebrate communities may affect the outbreak potential, maintenance and circulation of tick-borne pathogens. In this study we focus on the outbreak potential by exploring how the basic reproduction number R0 for different tick-borne pathogens depends on host community composition. We used published data on co-varying roe deer (Capreolus capreolus) and fallow deer (Dama dama) densities following a hunting ban, and different small mammal and bird densities, to investigate how the change in host community influences the R0 of four tick-borne pathogens: one non-zoonotic, namely Anaplasma phagocytophilum ecotype 2, and three zoonotic, namely A. phagocytophilum ecotype 1, Borrelia afzelii and Borrelia garinii. We calculated R0 using a next generation matrix approach, and used elasticities to quantify the contributions to R0 of the different groups of host species. The value of R0 for A. phagocytophilum ecotype 1 was higher with high fallow deer density and low roe deer density, while it was the other way round for A. phagocytophilum ecotype 2. For B. afzelii, R0 was mostly related to the density of small mammals and for B. garinii it was mostly determined by bird density. Our results show that the effect of species composition is substantial in the outbreak potential of tick-borne pathogens. This implies that also management actions that change this composition, can (indirectly and unintentionally) affect the outbreak potential of tick-borne diseases

Alphacoronavirus in a Daubenton's Myotis Bat (Myotis daubentonii) in Sweden

The ongoing COVID-19 pandemic has stimulated a search for reservoirs and species potentially involved in back and forth transmission. Studies have postulated bats as one of the key reservoirs of coronaviruses (CoVs), and different CoVs have been detected in bats. So far, CoVs have not been found in bats in Sweden and we therefore tested whether they carry CoVs. In summer 2020, we sampled a total of 77 adult bats comprising 74 Myotis daubentonii, 2 Pipistrellus pygmaeus, and 1 M. mystacinus bats in southern Sweden. Blood, saliva and feces were sampled, processed and subjected to a virus next-generation sequencing target enrichment protocol. An Alphacoronavirus was detected and sequenced from feces of a M. daubentonii adult female bat. Phylogenetic analysis of the almost complete virus genome revealed a close relationship with Finnish and Danish strains. This was the first finding of a CoV in bats in Sweden, and bats may play a role in the transmission cycle of CoVs in Sweden. Focused and targeted surveillance of CoVs in bats is warranted, with consideration of potential conflicts between public health and nature conservation required as many bat species in Europe are threatened and protected

Measurements of uncertainty in macrophyte metrics used to assess European lake water quality

Uncertainty is an important factor in ecological assessment, and has important implications for the ecological classification and management of lakes. However, our knowledge of the effects of uncertainty in the assessment of different ecological indicators is limited. Here, we used data from a standardized campaign of aquatic plant surveys, in 28 lakes from 10 European countries, to assess variation in macrophyte metrics across a set of nested spatial scales: countries, lakes, sampling stations, replicate transects, and replicate samples at two depth-zones. Metrics investigated in each transect included taxa richness, maximum depth of colonisation and two indicators of trophic status: Ellenberg’s N and a metric based on phosphorus trophic status. Metrics were found to have a slightly stronger relationship to pressures when they were calculated on abundance data compared to presence/absence data. Eutrophication metrics based on helophytes were found not to be useful in assessing the effects of nutrient pressure. These metrics were also found to vary with the depth of sampling, with shallower taxa representing higher trophic status. This study demonstrates the complex spatial variability in macrophyte communities, the effect of this variability on the metrics, and the implications to water managers, especially in relation to survey design