Significance of the VELACS Project to the Solution of Boundary Value Problems in Geotechnical Engineering

The VELACS project was conducted in order to improve existing methods for the analysis of the consequences of soil liquefaction. The project showed that centrifuge studies are repeatable only under carefully controlled conditions. Most procedures were able to predict the onset of liquefaction in contractive soils, but only effective stress based fully coupled nonlinear procedures were able to predict deformations due to liquefaction· None of the currently available procedures could simulate the behavior of dilative soils adequately. Problems were attributed to improper constitutive model implementation and inadequate calibration. An example to evaluate the behavior of a flow slide observed in a dynamic centrifuge test is presented. Numerical simulations of deformations with a finite deformation formulation showed that the main core of the embankment remained stable after shaking. This is in agreement with the observed behavior

Identification of QTL Controlling Thermal Properties of Maize Starch

Starch has many uses and some of these uses would be facilitated by altering its thermal properties. Genetic manipulation of starch thermal properties will be facilitated by a better understanding of the genetic control of starch gelatinization. We used differential scanning calorimetry to characterize the gelatinization parameters of maize (Zea mays L.) kernel starch prepared from two populations of recombinant inbred lines, an intermated B73xMo17 population (IBM) and an F6:7 Mo17xH99 population. The traits examined were the onset and peak temperatures of gelatinization and the enthalpy of gelatinization. These traits were measured for both native starch and for gelatinized starch allowed to recrystallize, a process called retrogradation. Substantial variation in these traits was found in spite of the narrow genetic base of the populations. We identified several quantitative trait loci (QTL) controlling traits of interest in each population. In the IBM population, a significant QTL for the peak temperature of gelatinization of retrograded starch co-localized to a molecular marker in the Wx1 gene, which encodes a granule bound starch synthase. The major QTL identified in this study explain, on average, ≈15% of the variation for a given trait, underscoring the complexity of the genetic control of starch functional properties

Deuterated Ammonia in Galactic Protostellar Cores

We report on a survey of \nh2d towards protostellar cores in low-mass star formation and quiescent regions in the Galaxy. Twenty-three out of thirty-two observed sources have significant (\gsim 5\sigma) \nh2d emission. Ion-molecule chemistry, which preferentially enhances deuterium in molecules above its cosmological value of \scnot{1.6}{-5} sufficiently explains these abundances. NH2D/NH3 ratios towards Class 0 sources yields information about the ``fossil remnants'' from the era prior to the onset of core collapse and star formation. We compare our observations with predictions of gas-phase chemical networks.Comment: 16 Pages, 7 Figures, Accepted to Ap.J., to appear in the June 20, 2001 editio

Local electrical imaging of tetragonal domains and field-induced ferroelectric twin walls in conducting SrTiO3

This work is supported by the National University of Singapore (NUS) Academic Research Fund (AcRF Tier 1 Grants No. R-144-000-346-112 and No. R-144-000-364-112) and the Singapore National Research Foundation (NRF) under the Competitive Research Programs (CRP Awards No. NRF-CRP 8-2011-06 and No. NRF-CRP10-2012-02) by the Institutional Strategy of the University of Tübingen (Deutsche Forschungsgemeinschaft, Grant No. ZUK 63), and by the EU-FP6-COST Grant No. MP1308.We demonstrate electrical mapping of tetragonal domains and electric field-induced twin walls in SrTiO3 as a function of temperature and gate bias utilizing the conducting LaAlO3/SrTiO3 interface and low-temperature scanning electron microscopy. Conducting twin walls appear below 105 K, and new twin patterns are observed after thermal cycling through the transition or on electric field gating. The nature of the twin walls is confirmed by calculating their intersection angles for different substrate orientations. Numerous walls formed when a large side- or back-gate voltage is applied are identified as field-induced ferroelectric twin walls in the paraelectric tetragonal matrix. The walls persist after switching off the electric field and on thermal cycling below 105 K. These observations point to a new type of ferroelectric functionality in SrTiO3, which could be exploited together with magnetism and superconductivity in a multifunctional context.Publisher PDFPeer reviewe

Transcriptomic analysis across nasal, temporal, and macular regions of human neural retina and RPE/choroid by RNA-Seq

AbstractProper spatial differentiation of retinal cell types is necessary for normal human vision. Many retinal diseases, such as Best disease and male germ cell associated kinase (MAK)-associated retinitis pigmentosa, preferentially affect distinct topographic regions of the retina. While much is known about the distribution of cell types in the retina, the distribution of molecular components across the posterior pole of the eye has not been well-studied. To investigate regional difference in molecular composition of ocular tissues, we assessed differential gene expression across the temporal, macular, and nasal retina and retinal pigment epithelium (RPE)/choroid of human eyes using RNA-Seq. RNA from temporal, macular, and nasal retina and RPE/choroid from four human donor eyes was extracted, poly-A selected, fragmented, and sequenced as 100 bp read pairs. Digital read files were mapped to the human genome and analyzed for differential expression using the Tuxedo software suite. Retina and RPE/choroid samples were clearly distinguishable at the transcriptome level. Numerous transcription factors were differentially expressed between regions of the retina and RPE/choroid. Photoreceptor-specific genes were enriched in the peripheral samples, while ganglion cell and amacrine cell genes were enriched in the macula. Within the RPE/choroid, RPE-specific genes were upregulated at the periphery while endothelium associated genes were upregulated in the macula. Consistent with previous studies, BEST1 expression was lower in macular than extramacular regions. The MAK gene was expressed at lower levels in macula than in extramacular regions, but did not exhibit a significant difference between nasal and temporal retina. The regional molecular distinction is greatest between macula and periphery and decreases between different peripheral regions within a tissue. Datasets such as these can be used to prioritize candidate genes for possible involvement in retinal diseases with regional phenotypes

Multi-threshold second-order phase transition

We present a theory of the multi-threshold second-order phase transition, and experimentally demonstrate the multi-threshold second-order phase transition phenomenon. With carefully selected parameters, in an external cavity diode laser system, we observe second-order phase transition with multiple (three or four) thresholds in the measured power-current-temperature three dimensional phase diagram. Such controlled death and revival of second-order phase transition sheds new insight into the nature of ubiquitous second-order phase transition. Our theory and experiment show that the single threshold second-order phase transition is only a special case of the more general multi-threshold second-order phase transition, which is an even richer phenomenon.Comment: 5 pages, 3 figure

Dynamic Analysis of Vascular Morphogenesis Using Transgenic Quail Embryos

Background: One of the least understood and most central questions confronting biologists is how initially simple clusters or sheet-like cell collectives can assemble into highly complex three-dimensional functional tissues and organs. Due to the limits of oxygen diffusion, blood vessels are an essential and ubiquitous presence in all amniote tissues and organs. Vasculogenesis, the de novo self-assembly of endothelial cell (EC) precursors into endothelial tubes, is the first step in blood vessel formation [1]. Static imaging and in vitro models are wholly inadequate to capture many aspects of vascular pattern formation in vivo, because vasculogenesis involves dynamic changes of the endothelial cells and of the forming blood vessels, in an embryo that is changing size and shape. Methodology/Principal Findings: We have generated Tie1 transgenic quail lines Tg(tie1:H2B-eYFP) that express H2B-eYFP in all of their endothelial cells which permit investigations into early embryonic vascular morphogenesis with unprecedented clarity and insight. By combining the power of molecular genetics with the elegance of dynamic imaging, we follow the precise patterning of endothelial cells in space and time. We show that during vasculogenesis within the vascular plexus, ECs move independently to form the rudiments of blood vessels, all while collectively moving with gastrulating tissues that flow toward the embryo midline. The aortae are a composite of somatic derived ECs forming its dorsal regions and the splanchnic derived ECs forming its ventral region. The ECs in the dorsal regions of the forming aortae exhibit variable mediolateral motions as they move rostrally; those in more ventral regions show significant lateral-to-medial movement as they course rostrally. Conclusions/Significance: The present results offer a powerful approach to the major challenge of studying the relative role(s) of the mechanical, molecular, and cellular mechanisms of vascular development. In past studies, the advantages of the molecular genetic tools available in mouse were counterbalanced by the limited experimental accessibility needed for imaging and perturbation studies. Avian embryos provide the needed accessibility, but few genetic resources. The creation of transgenic quail with labeled endothelia builds upon the important roles that avian embryos have played in previous studies of vascular development