On the swarming of Creseis acicula (Rang 1828) (Mollusca, Gastropoda) in the Western Arabian Gulf

An incidental swarming event of a zooplankton species took place in the anchorage area of Ras Tanura (Western Arabian Gulf), between June 10th and 13th 2020, causing serious problems to the anchored vessels. Examination of the samples collected from the clogged water pump of a vessel showed that the swarming was caused by the gastropod species Creseis acicula. Incidentally, it happens to be the first documented report on planktonic Gastropoda swarming in the Saudi waters of the Arabian Gulf. The swarming lasted only 2-3 days. Examination of the satellite images before, during, and after the swarming event indicated some changes in the color patterns of Ras Tanura surface waters, which could be linked to the swarm event. Due to bad weather conditions during and after the swarm period, it was not possible to collect seawater samples from the anchorage area and hence it was not possible to confirm whether this event could be linked with an algal or cyanobacterial bloom, as previously reported in another area of the Indian Ocean. Although most of the studies that reported C. acicula swarming indicated that this phenomenon is a natural one rather than being caused by external factors, some general precautionary/mitigation measures were proposed. Further studies and field observations are needed to better understand the causes of sea slug swarming and to avoid the issues it can cause to vessels, as it happened in the Western Arabian Gulf

Association of interleukin-17A polymorphisms with the risk of colorectal cancer: A case-control study

International audienceBackground: Interleukin (IL)-17A is proinflammatory cytokine produced by Th17 cells, which play key, but sometimes inconsistent role in autoimmunity and cancer. Polymorphic variants in IL-17A gene were differentially associated with susceptibility to cancer, including colorectal cancer (CRC). Aim: We investigated the association between six IL-17A gene variants (rs3819024, rs2275913, rs3819025, rs10484879, rs7747909, and rs3748067) with CRC susceptibility in Tunisians. Subjects and Methods: Retrospective case-control study. Study subjects comprised 293 patients with CRC, and 268 age-, gender-, and BMI-matched healthy controls. IL-17A genotyping was done by real-time PCR, with defined clusters. Results: Of the seven tested IL-17A tag-SNPs, minor allele frequency (MAF) of rs10484879 was significantly higher in CRC patients than control subjects. Heterozygous rs10484879 [OR (95% CI) = 2.63 (1.64-4.21)] was associated with higher risk, while carriage of heterozygous rs3748067 genotype was associated with reduced risk of CRC [OR (95% CI) = 0.56 (0.37-0.84)], respectively. Carriage of rs10484879 minor allele correlated with positive family history of CRC and other cancers (P = 0.002), CRC staging (P = 0.044), CRC treatment (P = 0.038), and with chemo body reaction (P = 0.001). Of the 7 IL-17A variants, 4 were in linkage dis-equilibrium, hence allowing for construction of 4-locus haplotypes. Varied linkage disequilibrium (LD) was noted between the even tested IL-17A variants, and further analysis was limited to only 4-locus (rs3819024-rs2275913-rs10484879-rs7747909). Haploview analysis identified the 4-locus IL-17A haplotypes AGTG (P < 0.011), and GATG (P = 0.036) to be positively associated with CRC, after controlling key covariates. Conclusion: IL-17A rs10484879 SNP, and IL-17A haplotypes AGGTG and GAGTG constitute independent factors of CRC susceptibility. We propose that IL-17A may be a target for future CRC immunotherapy

Trace element levels in the muscles of three tern species (Aves: Laridae) from the western Arabian Gulf: environmental assessment and implications for conservation

In the Arabian Gulf (called also Persian Gulf; hereafter 'the Gulf'), Jana and Karan Islands are recognized as one of the most Important Bird Areas in the region. Many migratory breeding seabirds, like the Greater Crested Tern Thalasseus bergii, White-cheeked Tern Sterna repressa and Bridled Tern Onychoprion anaethetus, depend on these islands during the breeding season. However, these aquatic wildlife species are suffering from intensified urban and industrial coastal development and various contamination events including wars and related oil spills. In this study, we used these three piscivorous top predator birds to analyse the levels of 19 trace elements (TEs; i.e. Al, As, Ba, Ca, Cd, Co, Cr, Cu, Fe, Hg, K, Mg, Mn, Na, Ni, Pb, Sr, V and Zn) in 15 muscular tissue samples from Jana and Karan Islands. PERMANOVA analysis showed no difference in contamination profile between sites nor between species probably due to their spatial and ecological proximity and therefore similar levels of exposure to TEs. Comparing these levels with existing literature, our results showed no particular concern for all elements, except for Al (maximum values recorded = 116.5 mu g g-1 d.w.) and, in two samples, Ba (33.67 mu g g-1 d.w.) and Pb (5.6 mu g g-1 d.w.). The results can be considered as an initial step for supplementary evaluations with a larger number of samples and specified time intervals for the collection of specimens. This study provided baseline information on the pollution status of these two ecologically important sites which require a continuous biomonitoring programme

Ecology, life history, and fisheries potential of the flathead lobster (Thenus orientalis) in the Arabian Gulf

This study, which included examination of the distribution and life history and a stock assessment of the flathead lobster (Thenus orientalis), is the first of its kind in the waters of Saudi Arabia in the Arabian Gulf, also known as the Persian Gulf. The flathead lobster is widely distributed in this region, although it is more abundant in the central and northern Arabian Gulf. Carapace lengths at 50% and 95% maturity are 59 and 65 mm for females and 58 and 71 mm for males. The fecundity of 4 berried females ranged from 26,000 to 76,000 eggs per spawning, and the fertilization rate exceeded 97%. Length-frequency data were consistent with just 2 cohorts, indicating that this species has a short life span and high growth coefficient (K=0.846 year(-1)). Large fishing boats (called dhows) accounted for more than 98% of the total landings. Estimates of natural mortality rates from use of generalized depletion models have high statistical precision and a magnitude compatible with short life history. In addition, abundance levels estimated with the depletion model are sufficient to support a sustainable small-scale fishery either as bycatch of shrimp trawlers or as a resource targeted with specialized gear. A targeted fishery for flathead lobster could be set during the off months of the shrimp trawl fishery (February-July), reducing interference with the reproduction cycle.info:eu-repo/semantics/publishedVersio

Diversity, distribution, and density of marine mammals along the Saudi waters of the Arabian Gulf: update from a multi-method approach

Despite the important role of marine mammals in marine ecosystems and the imperative for their conservation, there is still a great lack of information on the diversity, distribution, and density of these animals in the Saudi waters of the Arabian Gulf. To fill this gap, an integrative data-collection approach including fishermen’s questionnaires, opportunistic sighting reports, and directed boat-based surveys, was undertaken between 2016 and 2020, leading to the first scientific report of marine mammal diversity, distribution, and density in the region. The results of the different approaches carried out during the study confirmed a high diversity of cetaceans on the west coast of the study area, with bottlenose dolphins (Tursiops aduncus), humpback dolphins (Sousa plumbea) and dugongs (Dugong dugon) as the most common species. While the two dolphin species were found to be widely distributed in both coastal and offshore waters, D. dugon appears to occur exclusively in coastal waters in the southern part of the study area, mainly in the Gulf of Salwah. The presence of both species of dolphins increased during the summer months and in the vicinity of the numerous oil and gas facilities in this region. The distribution of the observed dolphins was found mostly within a 10–20 km radius around each facility. Other cetacean species observed less frequently in the area include Bryde’s whale (Balaenoptera edeni), killer whale (Orcinus orca), common dolphin (Delphinus delphis) and finless porpoise (Neophocaena phocaenoides). Regarding the density of marine mammals in the region, boat-based surveys confirmed the results of fishermen’s questionnaires and reports of opportunistic sightings, with bottlenose and humpback dolphins being the most abundant species. These results provide a baseline for policies oriented to the conservation of mammals in the Saudi waters of the Arabian Gulf.info:eu-repo/semantics/publishedVersio

Molecular characterization of the full-length genome sequences of HDV strains circulating in Tunisia.

International audienceWhile Tunisia is endemic for hepatitis B virus (HBV), a recent large-scale retrospective study, revealed a very low prevalence (2%) of hepatitis Delta virus (HDV) (Yacoubi et al. in J Clin Virol 72:126-132, 2015). All strains were classified within the genotype 1 (HDV-1) as assessed by nucleotide sequencing of the so-called 'R0' region of the genome described previously. In this study, we aimed to determine the full-length genome sequence of HDV isolates in order to fully characterize the HDV strains spreading in Tunisia. Eleven HDV antibody and RNA positive samples were obtained from the 1615 clinical samples previously studied. The whole genome sequence was obtained for 5 strains by sequencing and realignment of four overlapping regions covering the entire genome, followed by extensive phylogenetic analyses. Tunisian sequences segregated together with Turkish and African sequences and showed 60% GC content. Alignment with an HDV-1 consensus sequence revealed that they exhibited several point mutations in different functional domains of the delta proteins that, according to previous studies, might possibly affect their properties. In conclusion, the first full-length genome sequences of Tunisian HDV isolates are provided, isolates which are closely related to Turkish and Sub-Saharan Africa strains, supporting the hypothesis for the spread of HDV-1-strains from Africa via Tunisia to Turkey, before spread to the rest of the world

Primary structure and anticoagulant activity of fucoidan from the sea cucumber Holothuria polii

International audienceSea cucumber fucoidan is recently endowed with a variety of biological activities. In the present study, we studied the structure and anticoagulant effect of fucoidan from the sea cucumber Holothuria polii (Fuc-Hp). The Fuc-Hp was purified by anion exchange chromatography and its structure was characterized by FT-IR and NMR spectros-copy. Molecular weight measurements were performed by HPSEC-MALLS-dRI. Fuc-Hp anticoagulant activity was measured by activated partial thromboplastin and thrombin times, and by in vitro thrombin inhibition in the presence of antithrombin and heparin cofactor II. The assessment of thrombin generation was investigated using calibrated automated thrombography. Fuc-Hp with a high sulfate content (34.6%) and an average molecular mass of 1376.3 kDa was isolated from H. polii in amount of ~2.7 mg/g dry body wall. Primary structural analysis indicated that Fuc-Hp was mainly composed of a tetrafucose repeating unit branched by glucuronic acid. Fuc-Hp exhibited a high anticoagulant effect mediated essentially by heparin cofactor II and to lesser extent by anti-thrombin with IC 50 values of 0.16 μg/mL and 0.5 μg/mL, respectively. Overall results showed a high anticoagulant activity of Fuc-Hp, which was attributed to the high sulfate content and abundance of disulfated fucose residues of H. polii fucoidan

Development and characterization of bioactive edible films from spider crab (Maja crispata) chitosan incorporated with Spirulina extract.

International audienceActive food packaging films based on crab chitosan and Spirulina extract (SE) were developed. The effects of the SE incorporation at different levels on physical (color, opacity water vapor and oxygen permeability) and mechanical (tensile strength and elongation at break) properties of chitosan films were investigated. FTIR was carried out to observe the potential modifications of the chitosan films when incorporated with SE. The obtained results suggested that incorporation of SE into chitosan films improved mechanical and barrier properties. The antioxidant activity of the chitosan/SE films was characterized by means of three different analytical assays (DPPH, FRAP and FIC). Crab chitosan edible films containing SE showed higher antioxidant activity, regardless concentrations and methods assayed. Furthermore, the antioxidant activity occurred in a concentration-dependent manner. The agar disc diffusion method was used to determine the antibacterial activities of chitosan edible films against Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa, Listeria monocytogenes, Salmonella typhimurium, Bacillus subtilis and Bacillus cereus. The chitosan/SE films were more effective (p\textless0.05) against five of the seven tested bacteria. The obtained crab chitosan edible films incorporated with SE showed great potential to be used for active food packaging due to its excellent antioxidant and antibacterial activities

Seasonal patterns of microplastics in surface sediments of a Mediterranean lagoon heavily impacted by human activities (Bizerte lagoon, Northern Tunisia)

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