Statistics of association regional gene annotation.

<p>Statistics of association regional gene annotation.</p

Number distribution of association markers on the chromosome by the SNP_index, Euclidean distance and Euclidean distance combined SNP index association analysis methods.

<p>Number distribution of association markers on the chromosome by the SNP_index, Euclidean distance and Euclidean distance combined SNP index association analysis methods.</p

Statistical results for each SLAF type.

<p>Statistical results for each SLAF type.</p

Identification of the hot-region for 1000-seed weight through two types of association analysis methods.

<p>(A) The results of SNP_index association analysis. The black lines show all fitting results of Δ (SNP_index), the red lines show the threshold of Δ (SNP_index). The larger the result of Δ (SNP_index) is, the stronger the association is. The association threshold was 0.3764 and 4 SLAF markers on ChrA09 significantly correlated with the seed weight trait. (B) The results of Euclidean distance association analysis. The black lines show all fitting results of ED, the red lines show the threshold of ED. The larger the result of ED is, the stronger the association is. The association threshold was 0.5532 and 4 SLAF markers on ChrA09 significantly correlated with the seed weight trait.</p

The seed phenotype of two parent lines and two extreme pools were selected by 1000-seed weight (TSW) data for SLAF-sequencing.

<p>(A) Seeds of the large-seed line G-42 and the small-seed line 7–9. (Scale bar, 1 mm) (B) Forty-six lines with the heaviest TSW and 47 lines with the lightest TSW were selected and pooled for SLAF-sequencing (the histogram was drawn based on the TSW data collected from 250 DH lines in May, 2014).</p

Statistic results of SLAF tags for both parents and bulked DNA pools.

<p>Statistic results of SLAF tags for both parents and bulked DNA pools.</p

Statistic results of sequencing data for both parents and bulked DNA pools.

<p>Statistic results of sequencing data for both parents and bulked DNA pools.</p

Distribution diagrams of all SLAFs, polymorphic SLAFs and candidate SLAF markers on the <i>B</i>. <i>napus</i> genome.

<p>(A) All SLAFs (black lines) distributed on each chromosome. (B) Polymorphic SLAFs (black lines) distributed on each chromosome. (C) Candidate SLAF markers (black lines) distributed on each chromosome. In each chromosome, the more the SLAF tags are, the darker the color is.</p

Information on the association region by the SNP_index, Euclidean distance and Euclidean distance combined SNP index association analysis methods.

<p>Information on the association region by the SNP_index, Euclidean distance and Euclidean distance combined SNP index association analysis methods.</p

Number of all SLAFs, polymorphic SLAFs and high quality polymorphic SLAF number on each chromosome.

<p>Number of all SLAFs, polymorphic SLAFs and high quality polymorphic SLAF number on each chromosome.</p