NHEP Support for DES Shellfish Program 2005

For the past three years, Great Bay Coast Watch (GBCW) volunteers have provided the New Hampshire Department of Environmental Services (NHDES) Shellfish Program with significant assistance in performing tasks necessary in managing shellfish resources for human safety. This report describes a continuation of this mutually beneficial partnership

Temporal and Spatial Assessment of Usable Space and Cover Type Interspersion for Northern Bobwhites on Private Farmlands in Southwestern Ohio

Contemporary landscape change driven by socio-economic forces and advances in agricultural technology do not favor northern bobwhites (Colinus virginianus) in the Midwestern United States. The challenge of bobwhite conservation is to provide sufficient quantities of habitat with optimal configurations in proportions that satisfy needs throughout the year on private-owned working lands. We radio-tracked 58 coveys and 98 individual birds throughout the year in 2009-10 and 2010-11 on privately owned farmland in southwestern Ohio. We investigated temporal changes in usable space from use-availability data. Estimated proportions of usable space based on analyses of habitat selection across four study sites were 0.06-0.12 during the non-breeding season compared to 0.10-10.30 during the breeding season. We also modeled probabilities that radio-marked coveys or individual birds used points within individual cover types as a function of distance to other cover types. Locations of radio-marked coveys and individual birds within focal cover types were closer to other cover types compared to random points during breeding (mean = 44 m) and non-breeding (mean = 58 m) seasons. Probability of use within focal cover types declined with distance to other cover types, typically falling below 50% when distances exceeded 9-242 m. Locations of radio-marked coveys were concentrated near edges within used cover types, while locations of individual birds were more dispersed during the breeding season. Estimated proportions of usable space based on distances between locations of radio-marked bobwhites and nearest cover types were higher (0.30-0.53) than estimates based on habitat selection ratios, and were similar between non-breeding and breeding seasons. Potentially usable sites were not fully occupied in either season, but there was no relationship between crude covey densities and proportions of usable space estimated from habitat selection analyses during the breeding and non-breeding seasons across study sites and years (r2 \u3c 0.166, P \u3e 0.316). With distance to cover type estimates of usable space (years combined), two study sites with the highest proportions of usable space (0.43-0.53) also had the largest crude covey densities (0.0065-0.153 coveys/ha) compared to the other two sites with lower proportions of usable space (0.30-0.32) and smaller covey densities (0.004 – 0.006 coveys/ha). Habitat enhancement should focus on providing protective cover near food for coveys during the non-breeding season and protective cover near nesting and brood-rearing habitat during the breeding season. Conserving Midwestern bobwhite populations requires innovative practices that can be implemented on private lands as economic incentives change for farm operators. Improving protective cover along habitat edges can increase usable space by improving cover type juxtaposition (e.g. food near cover) while minimizing impact on farming practices

Demographic Analysis of a Declining Northern Bobwhite Population in Southwestern Ohio

Northern bobwhite (Colinus virginianus) populations continue to decline throughout much of their range, especially in the Midwestern United States. Land use and habitat changes are understood to be the primary cause of decline, and it is unclear how vital rates affect growth of regional populations. We estimated relative abundance and population vital rates of bobwhites on 8 private land sites in southwestern Ohio during 2008–2011. Life stage simulation analyses were used to model the influence of 9 demographic parameters on population growth rates (k). All but one vital rate, chick survival, were modeled with empirical data randomly selected from normal distributions estimated (mean 6 SD) from our study population. The median value of k after 1,000 simulations was 0.248 (inter- quartile range 1⁄4 0.113-0.428). Non-breeding season survival was the dominant vital rate, explaining 50.4% of variation in k, followed by nest success (r2 1⁄4 0.163), and breeding season survival of adults (r2 1⁄4 0.083). Chick survival, egg success, and clutch size individually explained in order 1.4 to 4.6% of variation in k when modeled with survival estimates. Renesting, double-brooding, and male incubation individually explained , 1% of the variation in k. Total fecundity modeled as the sum across individual vital rate components explained 36.9% of variation in k. Non-breeding season survival was the most limiting population vital rate, but age ratios of fall-captured birds and simulated fecundity values indicated partial limitation by recruitment. Population stability (k 1⁄4 1) could be achieved by increasing non-breeding survival from 10.9 to 36.9%. Higher rates of nest success, the second most limiting vital rate, would not stabilize population growth unless survival rates also increased. Bobwhite conservation strategies should emphasize habitat enhancements designed to increase survival rates and useable space during the non-breeding season in Ohio and possibly other Midwestern states

Legacy and Novel Per- and Polyfluoroalkyl Substances in Juvenile Seabirds from the U.S. Atlantic Coast

Per- and polyfluoroalkyl substances (PFAS) are anthropogenic, globally distributed chemicals. Legacy PFAS, including perfluorooctane sulfonate (PFOS), have been regularly detected in marine fauna but little is known about their current levels or the presence of novel PFAS in seabirds. We measured 36 emerging and legacy PFAS in livers from 31 juvenile seabirds from Massachusetts Bay, Narragansett Bay, and the Cape Fear River Estuary (CFRE), United States. PFOS was the major legacy perfluoroalkyl acid present, making up 58% of concentrations observed across all habitats (range: 11–280 ng/g). Novel PFAS were confirmed in chicks hatched downstream of a fluoropolymer production site in the CFRE: a perfluorinated ether sulfonic acid (Nafion byproduct 2; range: 1–110 ng/g) and two perfluorinated ether carboxylic acids (PFO4DA and PFO5DoDA; PFO5DoDA range: 5–30 ng/g). PFOS was inversely associated with phospholipid content in livers from CFRE and Massachusetts Bay individuals, while δ 13C, an indicator of marine versus terrestrial foraging, was positively correlated with some long-chain PFAS in CFRE chick livers. There is also an indication that seabird phospholipid dynamics are negatively impacted by PFAS, which should be further explored given the importance of lipids for seabirds

Traffic Forecasting for Pavement Design

The need for improved traffic estimation procedures has been emphasized by several studies that demonstrated that previously available data were not adequate. Some data were not considered representative of actual traffic conditions because of overloaded trucks avoiding weighing scales and insufficient traffic sampling programs. In addition, previous forecasting procedures did not reflect the increases in legal load limits, the significant increase in the number of heavy trucks, or the shift toward larger vehicle types that has occurred in recent years. Improved estimates of current traffic loadings based on larger samples of much higher quality data would allow development of procedures for making improved estimates of historical traffic loadings and better forecasts of traffic loadings during the design period. The emergence of automatic vehicle classification equipment, permanent and portable weigh-in-motion (WIM) systems, and the application of microprocessors and microcomputers to these data acquisition functions now offer tools that may be used effectively in meeting these needs. Representatives from four States (Florida, Kentucky, Oregon, and Washington) met on several occasions to discuss the subject of traffic forecasting for pavement design. Information was compiled on all aspects of the traffic forecasting process, options were presented for each step of the process, and recommendations were developed to assist highway agencies in improving current practices and procedures

Adoption of Health Information Technology Among US Nursing Facilities

Objectives: Nursing facilities have lagged behind in the adoption interoperable health information technology (i.e. technologies that allow the sharing and use of electronic patient information between different information systems). The objective of this study was to estimate the nationwide prevalence of electronic health record (EHR) adoption among nursing facilities and to identify the factors associated with adoption. Design: Cross-sectional survey. Setting & participants: We surveyed members of the Society for Post-Acute & Long-Term Care Medicine (AMDA) about their organizations’ health information technology usage and characteristics. Measurements: Using questions adopted from existing instruments, the survey measured nursing home’s EHR adoption, the ability to send, receive, search and integrate electronic information, as well as barriers to usage. Additionally, we linked survey responses to public use secondary data sources to construct measurements for eight determinants known to be associated with organizational adoption: innovativeness, functional differentiation, role specialization, administrative intensity, professionalism, complexity, technical knowledge resources and slack resources. A series of regression models estimated the association between potential determinants and technology adoption. Results: 84% of nursing facilities reported using an EHR. After controlling for all other factors, respondents who characterized their organization as more innovative had more than 6 times the odds (adjusted odds ratio = 6.39; 95%CI = 2.69, 15.21) of adopting an EHR. Organization innovativeness was also associated with an increased odds of being able to send, integrate, and search for electronic information. The most commonly identified barrier to sharing clinical information among nursing facilities with an EHR was a reported absence of interoperability (57%). Conclusions/Implications: An organizational culture that fosters innovation and awareness campaigns by professional societies may facilitate further adoption and effective use of technology. This will be increasingly important as policymakers continue to emphasize the use of EHRs and interoperability to improve the quality of care in nursing facilities

Organizational characteristics and perceptions of clinical event notification services in healthcare settings: a study of health information exchange

Objective: Event notification systems are an approach to health information exchange (HIE) that notifies end-users of patient interactions with the healthcare system through real-time automated alerts. We examined associations between organizational capabilities and perceptions of event notification system use. Materials and methods: We surveyed representatives (n = 196) from healthcare organizations (n = 96) that subscribed to 1 of 3 Health Information Organizations' event notification services in New York City (response rate = 27%). The survey was conducted in Fall 2017 and Winter 2018. Surveys measured respondent characteristics, perceived organizational capabilities, event notification use, care coordination, and care quality. Exploratory factor analysis was used to identify relevant independent and dependent variables. We examined the relationship between organizational capabilities, care coordination, and care quality using multilevel linear regression models with random effects. Results: Respondents indicated that the majority of their organizations provided follow-up care for emergency department visits (66%) and hospital admissions (73%). Perceptions of care coordination were an estimated 57.5% (β = 0.575; P < 0.001) higher among respondents who reported event notifications fit within their organization's existing workflows. Perceptions of care quality were 46.5% (β = 0.465; P < 0.001) higher among respondents who indicated event notifications fit within existing workflows and 23.8% (β = 0.238; P < 0.01) higher where respondents reported having supportive policies and procedures for timely response and coordination of event notifications. Discussion and conclusion: Healthcare organizations with specific workflow processes and positive perceptions of fit are more likely to use event notification services to improve care coordination and care quality. In addition, event notification capacity and patient consent procedures influence how end-users perceive event notification services

Design and Implementation of an Underwater Sound Recording Device

To monitor the underwater sound and pressure waves generated by anthropogenic activities such as underwater blasting and pile driving, an autonomous system was designed to record underwater acoustic signals. The underwater sound recording device (USR) allows for connections of two hydrophones or other dynamic pressure sensors, filters high frequency noise out of the collected signals, has a gain that can be independently set for each sensor, and allows for 2 h of data collection. Two versions of the USR were created: a submersible model deployable to a maximum depth of 300 m, and a watertight but not fully submersible model. Tests were performed on the USR in the laboratory using a data acquisition system to send single-frequency sinusoidal voltages directly to each component. These tests verified that the device operates as designed and performs as well as larger commercially available data acquisition systems, which are not suited for field use. On average, the designed gain values differed from the actual measured gain values by about 0.35 dB. A prototype of the device was used in a case study to measure blast pressures while investigating the effect of underwater rock blasting on juvenile Chinook salmon and rainbow trout. In the case study, maximum positive pressure from the blast was found to be significantly correlated with frequency of injury for individual fish. The case study also demonstrated that the device withstood operation in harsh environments, making it a valuable tool for collecting field measurements

Mitsui-7, heat-treated, and nitrogen-doped multi-walled carbon nanotubes elicit genotoxicity in human lung epithelial cells

Background: The unique physicochemical properties of multi-walled carbon nanotubes (MWCNT) have led to many industrial applications. Due to their low density and small size, MWCNT are easily aerosolized in the workplace making respiratory exposures likely in workers. The International Agency for Research on Cancer designated the pristine Mitsui-7 MWCNT (MWCNT-7) as a Group 2B carcinogen, but there was insufficient data to classify all other MWCNT. Previously, MWCNT exposed to high temperature (MWCNT-HT) or synthesized with nitrogen (MWCNT-ND) have been found to elicit attenuated toxicity; however, their genotoxic and carcinogenic potential are not known. Our aim was to measure the genotoxicity of MWCNT-7 compared to these two physicochemically-altered MWCNTs in human lung epithelial cells (BEAS-2B & SAEC). Results: Dose-dependent partitioning of individual nanotubes in the cell nuclei was observed for each MWCNT material and was greatest for MWCNT-7. Exposure to each MWCNT led to significantly increased mitotic aberrations with multi- and monopolar spindle morphologies and fragmented centrosomes. Quantitative analysis of the spindle pole demonstrated significantly increased centrosome fragmentation from 0.024–2.4 μg/mL of each MWCNT. Significant aneuploidy was measured in a dose-response from each MWCNT-7, HT, and ND; the highest dose of 24 μg/mL produced 67, 61, and 55%, respectively. Chromosome analysis demonstrated significantly increased centromere fragmentation and translocations from each MWCNT at each dose. Following 24 h of exposure to MWCNT-7, ND and/or HT in BEAS-2B a significant arrest in the G1/S phase in the cell cycle occurred, whereas the MWCNT-ND also induced a G2 arrest. Primary SAEC exposed for 24 h to each MWCNT elicited a significantly greater arrest in the G1 and G2 phases. However, SAEC arrested in the G1/S phase after 72 h of exposure. Lastly, a significant increase in clonal growth was observed one month after exposure to 0.024 μg/mL MWCNT-HT & ND. Conclusions: Although MWCNT-HT & ND cause a lower incidence of genotoxicity, all three MWCNTs cause the same type of mitotic and chromosomal disruptions. Chromosomal fragmentation and translocations have not been observed with other nanomaterials. Because in vitro genotoxicity is correlated with in vivo genotoxic response, these studies in primary human lung cells may predict the genotoxic potency in exposed human populations

A Transcription Factor Map as Revealed by a Genome-Wide Gene Expression Analysis of Whole-Blood mRNA Transcriptome in Multiple Sclerosis

Background: Several lines of evidence suggest that transcription factors are involved in the pathogenesis of Multiple Sclerosis (MS) but complete mapping of the whole network has been elusive. One of the reasons is that there are several clinical subtypes of MS and transcription factors that may be involved in one subtype may not be in others. We investigate the possibility that this network could be mapped using microarray technologies and contemporary bioinformatics methods on a dataset derived from whole blood in 99 untreated MS patients (36 Relapse Remitting MS, 43 Primary Progressive MS, and 20 Secondary Progressive MS) and 45 age-matched healthy controls. Methodology/Principal Findings: We have used two different analytical methodologies: a non-standard differential expression analysis and a differential co-expression analysis, which have converged on a significant number of regulatory motifs that are statistically overrepresented in genes that are either differentially expressed (or differentially co-expressed) in cases and controls (e.g., V$KROX_Q6, p-value ,3.31E-6; V$CREBP1_Q2, p-value ,9.93E-6, V$YY1_02, p-value ,1.65E-5). Conclusions/Significance: Our analysis uncovered a network of transcription factors that potentially dysregulate several genes in MS or one or more of its disease subtypes. The most significant transcription factor motifs were for the Early Growth Response EGR/KROX family, ATF2, YY1 (Yin and Yang 1), E2F-1/DP-1 and E2F-4/DP-2 heterodimers, SOX5, and CREB and ATF families. These transcription factors are involved in early T-lymphocyte specification and commitment as well as in oligodendrocyte dedifferentiation and development, both pathways that have significant biological plausibility in MS causation