MIGHTEE-HI: The relation between the HI gas in galaxies and the cosmic web

We study the 3D axis of rotation (3D spin) of 77 HI galaxies from the MIGHTEE-HI Early Science observations, and its relation to the filaments of the cosmic web. For this HI-selected sample, the alignment between the spin axis and the closest filament ($\lvert \cos \psi \rvert$) is higher for galaxies closer to the filaments, with $\langle\lvert \cos \psi \rvert\rangle= 0.66 \pm 0.04$ for galaxies $<5$ Mpc from their closest filament compared to $\langle\lvert \cos \psi \rvert\rangle= 0.37 \pm 0.08$ for galaxies at $5 < d <10$ Mpc. We find that galaxies with a low HI-to-stellar mass ratio ($\log_{10}(M_{\rm HI}/M_{\star}) < 0.11$) are more aligned with their closest filaments, with $\langle\lvert \cos \psi \rvert\rangle= 0.58 \pm 0.04$; whilst galaxies with ($\log_{10}(M_{\rm HI}/M_{\star}) > 0.11$) tend to be mis-aligned, with $\langle\lvert \cos \psi \rvert\rangle= 0.44 \pm 0.04$. We find tentative evidence that the spin axis of HI-selected galaxies tend to be aligned with associated filaments ($d<10$ Mpc), but this depends on the gas fractions. Galaxies that have accumulated more stellar mass compared to their gas mass tend towards stronger alignment. Our results suggest that those galaxies that have accrued high gas fraction with respect to their stellar mass may have had their spin axis alignment with the filament disrupted by a recent gas-rich merger, whereas the spin vector for those galaxies in which the neutral gas has not been strongly replenished through a recent merger tend to orientate towards alignment with the filament. We also investigate the spin transition between galaxies with a high HI content and a low HI content at a threshold of $M_{\mathrm{HI}}\approx 10^{9.5} M_{\odot}$ found in simulations, however we find no evidence for such a transition with the current data.Comment: 11 pages, 9 figures, 5 tables, accepted for publication in MNRA

Subtidal macrozoobenthos communities from northern Chile during and post El Niño 1997–1998

Despite a large amount of climatic and oceanographic information dealing with the recurring climate phenomenon El Niño (EN) and its well known impact on diversity of marine benthic communities, most published data are rather descriptive and consequently our understanding of the underlying mechanisms and processes that drive community structure during EN are still very scarce. In this study, we address two questions on the effects of EN on macrozoobenthic communities: (1) how does EN affect species diversity of the communities in northern Chile? and (2) is EN a phenomenon that restarts community assembling processes by affecting species interactions in northern Chile? To answer these questions, we compared species diversity and co-occurrence patterns of soft-bottoms macrozoobenthos communities from the continental shelf off northern Chile during (March 1998) and after (September 1998) the strong EN event 1997–1998. The methods used varied from species diversity and species co-occurrence analyses to multivariate ordination methods. Our results indicate that EN positively affects diversity of macrozoobenthos communities in the study area, increasing the species richness and diversity and decreasing the species dominance. EN represents a strong disturbance that affects species interactions that rule the species assembling processes in shallow-water, sea-bottom environments

Threat-sensitive anti-predator defence in precocial wader, the northern lapwing Vanellus vanellus

Birds exhibit various forms of anti-predator behaviours to avoid reproductive failure, with mobbing—observation, approach and usually harassment of a predator—being one of the most commonly observed. Here, we investigate patterns of temporal variation in the mobbing response exhibited by a precocial species, the northern lapwing (Vanellus vanellus). We test whether brood age and self-reliance, or the perceived risk posed by various predators, affect mobbing response of lapwings. We quantified aggressive interactions between lapwings and their natural avian predators and used generalized additive models to test how timing and predator species identity are related to the mobbing response of lapwings. Lapwings diversified mobbing response within the breeding season and depending on predator species. Raven Corvus corax, hooded crow Corvus cornix and harriers evoked the strongest response, while common buzzard Buteo buteo, white stork Ciconia ciconia, black-headed gull Chroicocephalus ridibundus and rook Corvus frugilegus were less frequently attacked. Lapwings increased their mobbing response against raven, common buzzard, white stork and rook throughout the breeding season, while defence against hooded crow, harriers and black-headed gull did not exhibit clear temporal patterns. Mobbing behaviour of lapwings apparently constitutes a flexible anti-predator strategy. The anti-predator response depends on predator species, which may suggest that lapwings distinguish between predator types and match mobbing response to the perceived hazard at different stages of the breeding cycle. We conclude that a single species may exhibit various patterns of temporal variation in anti-predator defence, which may correspond with various hypotheses derived from parental investment theory

Optical, Radio Continuum and HI Deep Spectroscopic Survey (ORCHIDSS)

Galaxie

MIGHTEE: total intensity radio continuum imaging and the COSMOS / XMM-LSS Early Science fields

© 2021 The Author(s) Published by Oxford University Press on behalf of the Royal Astronomical Society. This is the accepted manuscript version of an article which has been published in final form at https://doi.org/10.1093/mnras/stab3021MIGHTEE is a galaxy evolution survey using simultaneous radio continuum, spectro-polarimetry, and spectral line observations from the South African MeerKAT telescope. When complete, the survey will image $\sim$20 deg$^{2}$ over the COSMOS, E-CDFS, ELAIS-S1, and XMM-LSS extragalactic deep fields with a central frequency of 1284 MHz. These were selected based on the extensive multiwavelength datasets from numerous existing and forthcoming observational campaigns. Here we describe and validate the data processing strategy for the total intensity continuum aspect of MIGHTEE, using a single deep pointing in COSMOS (1.6 deg$^{2}$) and a three-pointing mosaic in XMM-LSS (3.5 deg$^{2}$). The processing includes the correction of direction-dependent effects, and results in thermal noise levels below 2~$\mathrm{\mu}$Jy beam$^{-1}$ in both fields, limited in the central regions by classical confusion at $\sim$8$''$ angular resolution, and meeting the survey specifications. We also produce images at $\sim$5$''$ resolution that are $\sim$3 times shallower. The resulting image products form the basis of the Early Science continuum data release for MIGHTEE. From these images we extract catalogues containing 9,896 and 20,274 radio components in COSMOS and XMM-LSS respectively. We also process a close-packed mosaic of 14 additional pointings in COSMOS and use these in conjunction with the Early Science pointing to investigate methods for primary beam correction of broadband radio images, an analysis that is of relevance to all full-band MeerKAT continuum observations, and wide field interferometric imaging in general. A public release of the MIGHTEE Early Science continuum data products accompanies this article.Peer reviewedFinal Accepted Versio

Obscured phylogeny and possible recombinational dormancy in Escherichia coli

<p>Abstract</p> <p>Background</p> <p><it>Escherichia coli </it>is one of the best studied organisms in all of biology, but its phylogenetic structure has been difficult to resolve with current data and analytical techniques. We analyzed single nucleotide polymorphisms in chromosomes of representative strains to reconstruct the topology of its emergence.</p> <p>Results</p> <p>The phylogeny of <it>E. coli </it>varies according to the segment of chromosome analyzed. Recombination between extant <it>E. coli </it>groups is largely limited to only three intergroup pairings.</p> <p>Conclusions</p> <p>Segment-dependent phylogenies most likely are legacies of a complex recombination history. However, <it>E. coli </it>are now in an epoch in which they no longer broadly share DNA. Using the definition of species as organisms that freely exchange genetic material, this recombinational dormancy could reflect either the end of <it>E. coli </it>as a species, or herald the coalescence of <it>E. coli </it>groups into new species.</p

MIGHTEE: multi-wavelength counterparts in the COSMOS field

In this paper we combine the Early Science radio continuum data from the MeerKAT International GHz Tiered Extragalactic Exploration (MIGHTEE) Survey, with optical and near-infrared data and release the cross-matched catalogues. The radio data used in this work covers $0.86$ deg$^2$ of the COSMOS field, reaches a thermal noise of $1.7$ $\mu$Jy/beam and contains $6102$ radio components. We visually inspect and cross-match the radio sample with optical and near-infrared data from the Hyper Suprime-Cam (HSC) and UltraVISTA surveys. This allows the properties of active galactic nuclei and star-forming populations of galaxies to be probed out to $z \approx 5$. Additionally, we use the likelihood ratio method to automatically cross-match the radio and optical catalogues and compare this to the visually cross-matched catalogue. We find that 94 per cent of our radio source catalogue can be matched with this method, with a reliability of $95$ per cent. We proceed to show that visual classification will still remain an essential process for the cross-matching of complex and extended radio sources. In the near future, the MIGHTEE survey will be expanded in area to cover a total of $\sim$20~deg$^2$; thus the combination of automated and visual identification will be critical. We compare redshift distribution of SFG and AGN to the SKADS and T-RECS simulations and find more AGN than predicted at $z \sim 1$.Comment: 15 pages, 15 figures. Accepted for publication in MNRA

MIGHTEE: Deep 1.4 GHz Source Counts and the Sky Temperature Contribution of Star Forming Galaxies and Active Galactic Nuclei

We present deep 1.4 GHz source counts from $\sim$5 deg$^2$ of the continuum Early Science data release of the MeerKAT International Gigahertz Tiered Extragalactic Exploration (MIGHTEE) survey down to $S_{1.4\textrm{GHz}}\sim$15 $\mu$Jy. Using observations over two extragalactic fields (COSMOS and XMM-LSS), we provide a comprehensive investigation into correcting the incompleteness of the raw source counts within the survey to understand the true underlying source count population. We use a variety of simulations that account for: errors in source detection and characterisation, clustering, and variations in the assumed source model used to simulate sources within the field and characterise source count incompleteness. We present these deep source count distributions and use them to investigate the contribution of extragalactic sources to the sky background temperature at 1.4 GHz using a relatively large sky area. We then use the wealth of ancillary data covering{a subset of the COSMOS field to investigate the specific contributions from both active galactic nuclei (AGN) and star forming galaxies (SFGs) to the source counts and sky background temperature. We find, similar to previous deep studies, that we are unable to reconcile the sky temperature observed by the ARCADE 2 experiment. We show that AGN provide the majority contribution to the sky temperature contribution from radio sources, but the relative contribution of SFGs rises sharply below 1 mJy, reaching an approximate 15-25% contribution to the total sky background temperature ($T_b\sim$100 mK) at $\sim$15 $\mu$Jy.Comment: 24 pages, 12 figures; Accepted for publication in MNRA