Collective charge density wave motion through an ensemble of Aharonov-Bohm rings

We investigate theoretically the collective charge density wave motion through an ensemble of small disordered Aharonov-Bohm rings. It is shown that the magnetic flux modulates the threshold field and the magnetoresistance with a half flux quantum periodicity $\Phi_{0}/2=h/2e$, resulting from ensemble averaging over random scattering phases of multiple rings. The magnitude of the magnetoresistance oscillations decreases rapidly with increasing bias. This is consistent with recent experiments on $NbSe_3$ in presence of columnar defects [Phys. Rev. Lett. 78, 919 (1997)].Comment: 4 pages Revtex, 2 figures. Submitted to Phys. Rev. Let

Quantitative genetics of disease traits

John James authored two key papers on the theory of risk to relatives for binary disease traits and the relationship between parameters on the observed binary scale and an unobserved scale of liability (James Annals of Human Genetics, 1971; 35: 47; Reich, James and Morris Annals of Human Genetics, 1972; 36: 163). These two papers are John James' most cited papers (198 and 328 citations, November 2014). They have been influential in human genetics and have recently gained renewed popularity because of their relevance to the estimation of quantitative genetics parameters for disease traits using SNP data. In this review, we summarize the two early papers and put them into context. We show recent extensions of the theory for ascertained case-control data and review recent applications in human genetics

Strong Effects of Weak Localization in Charge Density Wave/Normal Metal Hybrids

Collective transport through a multichannel disordered conductor in contact with charge-density-wave electrodes is theoretically investigated. The statistical distribution function of the threshold potential for charge-density wave sliding is calculated by random matrix theory. In the diffusive regime weak localization has a strong effect on the sliding motion.Comment: To be published in Physical Review

Directed transport as a mechanism for protein folding in vivo

We propose a model for protein folding in vivo based on a Brownian-ratchet mechanism in the multidimensional energy landscape space. The device is able to produce directed transport taking advantage of the assumed intrinsic asymmetric properties of the proteins and employing the consumption of energy provided by an external source. Through such a directed transport phenomenon, the polypeptide finds the native state starting from any initial state in the energy landscape with great efficacy and robustness, even in the presence of different type of obstacles. This model solves Levinthal's paradox without requiring biased transition probabilities but at the expense of opening the system to an external field.Comment: 16 pages, 7 figure

The Normal College News, March 23, 1911

Contains fulltext : 224795.pdf (Publisher’s version ) (Closed access)In deze bijdrage betogen de auteurs dat het contractuele aansprakelijkheidsrecht slechts zeer beperkte mogelijkheden biedt voor een afnemer van producten en diensten die een cybersecuritycomponent bevatten om schade door digitale onveiligheid in een business to businessrelatie op de leverancier te verhalen. Een combinatie van juridische barrières (vage zorgplichten, exoneratieclausules, moeilijk kwantificeerbare schade, complicaties bij het vaststellen van causaliteit, en bewijsproblemen door informatieasymmetrie) en economische barrières (verschillen in onderhandelingsmacht, hoge kosten en risico’s bij procederen, en mogelijk faillissement van de schadeveroorzaker) zorgt er juist op het terrein van digitale onveiligheid voor dat een aansprakelijkheidszaak meestal niet loont. De auteurs doen aanbevelingen om het geschetste probleem aan te pakken.7 p

The Inverse Born Approximation: Exact Determination of Shape of Convex Voids

The Inverse Born Approximation (IBA) to the elastic wave inverse scattering problem is known to give highly accurate results for the shape of complex voids. In this paper we present an argument demonstrating that the IBA is, in fact, exact for determining the size, shape and orientation of a wide class of these scatterers given infinite bandwidth and unlimited aperture information. Essentially, our argument demonstrates how the IBA algorithm picks out the singular contribution to the impulse response function and correctly relates it to the shape of the scatterer. Some specific examples will be used to illustrate the more intuitive aspects of the discussion

Mechanical control of the directional stepping dynamics of the kinesin motor

Among the multiple steps constituting the kinesin's mechanochemical cycle, one of the most interesting events is observed when kinesins move an 8-nm step from one microtubule (MT)-binding site to another. The stepping motion that occurs within a relatively short time scale (~100 microsec) is, however, beyond the resolution of current experiments, therefore a basic understanding to the real-time dynamics within the 8-nm step is still lacking. For instance, the rate of power stroke (or conformational change), that leads to the undocked-to-docked transition of neck-linker, is not known, and the existence of a substep during the 8-nm step still remains a controversial issue in the kinesin community. By using explicit structures of the kinesin dimer and the MT consisting of 13 protofilaments (PFs), we study the stepping dynamics with varying rates of power stroke (kp). We estimate that 1/kp <~ 20 microsec to avoid a substep in an averaged time trace. For a slow power stroke with 1/kp>20 microsec, the averaged time trace shows a substep that implies the existence of a transient intermediate, which is reminiscent of a recent single molecule experiment at high resolution. We identify the intermediate as a conformation in which the tethered head is trapped in the sideway binding site of the neighboring PF. We also find a partial unfolding (cracking) of the binding motifs occurring at the transition state ensemble along the pathways prior to binding between the kinesin and MT.Comment: 26 pages, 10 figure

A new purple sulfur bacterium from saline littoral sediments, Thiorhodotvibrio winogradskyi gen. nov. and sp. nov.

Two strains of a new purple sulfur bacterium were isolated in pure culture from the littoral sediment of a saline lake (Mahoney Lake, Canada) and a marine microbial mat from the North Sea island of Mellum, respectively. Single cells were vibrioid-to spirilloid-shaped and motile by means of single polar flagella. Intracellular photosynthetic membranes were of the vesicular type. As photosynthetic pigments, bacteriochlorophyll a and the carotenoids lycopene, rhodopin, anhydrorhodovibrin, rhodovibrin and spirilloxanthin were present. Hydrogen sulfide and elemental sulfur were used under anoxic conditions for phototrophic growth. In addition one strain (06511) used thiosulfate. Carbon dioxide, acetate and pyruvate were utilized by both strains as carbon sources. Depending on the strain propionate, succinate, fumarate, malate, tartrate, malonate, glycerol or peptone may additionally serve as carbon sources in the light. Optimum growth rates were obtained at pH 7.2, 33 °C, 50 mol m-2 s-1 intensity of daylight fluorescent tubes and a salinity of 2.2–3.2% NaCl. During growth on sulfide, up to ten small sulfur globules were formed inside the cells. The strains grew microaerophilic in the dark and exhibited high specific respiration rates. No vitamins were required for growth. The DNA base composition was 61.0–62.4 mol% G+C. The newly isolated bacterium belongs to the family chromatiaceae and is described as a member of a new genus and species, Thiorhodovibrio winogradskyi gen. nov. and sp. nov. with the type strain SSP1, DSM No. 6702

Associations of pain intensity and pain-related disability with psychological and socio-demographic factors in patients with temporomandibular disorders:A cross-sectional study at a specialised dental clinic

The study assessed whether psychological and socio-demographic factors, including somatisation, depression, stress, anxiety, daytime sleepiness, optimism, gender and age, are associated with pain intensity and pain-related disability in patients with temporomandibular disorders (TMDs). In total, 320 TMD patients were involved in the study. The psychological status of each patient was assessed with questionnaires, including the Symptom Checklist-90 (SCL-90), Epworth Sleeping Scale (ESS), stress questionnaire and Life Orientation Test-Revised (LOT-R). TMD pain, including pain intensity and pain-related disability, was assessed with characteristic pain intensity (CPI) and disability points scales. The associations of psychological and socio-demographic factors with pain intensity and pain-related disability were assessed through logistic regression analyses. Higher pain intensity was significantly associated with more severe anxiety (P = 0·004), more severe somatisation (P < 0·001), more severe depression (P < 0·001), more severe stress (P = 0·001) and lower optimism (P = 0·025) in univariate regression analyses. However, multiple regression analysis showed that only somatisation was significantly associated with pain intensity (P < 0·001). Higher pain-related disability was significantly associated with more severe anxiety (P < 0·001), more severe somatisation (P < 0·001), more severe depression (P < 0·001), more severe stress (P < 0·001) and lower optimism (P = 0·003) in univariate regression analyses. However, multiple regression analysis showed that only depression was significantly associated with pain-related disability (P = 0·003). Among the psychological and socio-demographic factors in this study, somatisation was the best predictor of pain intensity, while depression was the best predictor of pain-related disability