Unstable Disk Galaxies. I. Modal Properties

I utilize the Petrov-Galerkin formulation and develop a new method for solving the unsteady collisionless Boltzmann equation in both the linear and nonlinear regimes. In the first order approximation, the method reduces to a linear eigenvalue problem which is solved using standard numerical methods. I apply the method to the dynamics of a model stellar disk which is embedded in the field of a soft-centered logarithmic potential. The outcome is the full spectrum of eigenfrequencies and their conjugate normal modes for prescribed azimuthal wavenumbers. The results show that the fundamental bar mode is isolated in the frequency space while spiral modes belong to discrete families that bifurcate from the continuous family of van Kampen modes. The population of spiral modes in the bifurcating family increases by cooling the disk and declines by increasing the fraction of dark to luminous matter. It is shown that the variety of unstable modes is controlled by the shape of the dark matter density profile.Comment: Accepted for publication in The Astrophysical Journa

The Pattern Speed of the Galactic Bar

Most late-type stars in the solar neighborhood have velocities similar to the local standard of rest (LSR), but there is a clearly separated secondary component corresponding to a slower rotation and a mean outward motion. Detailed simulations of the response of a stellar disk to a central bar show that such a bi-modality is expected from outer-Lindblad resonant scattering. When constraining the run of the rotation curve by the proper motion of Sgr A* and the terminal gas velocities, the value observed for the rotation velocity separating the two components results in a value of (53+/-3)km/s/kpc for the pattern speed of the bar, only weakly dependent on the precise values for Ro and bar angle phi.Comment: 5 pages LaTeX, 2 Figs, accepted for publication in ApJ Letter

The Effect of the Outer Lindblad Resonance of the Galactic Bar on the Local Stellar Velocity Distribution

Hydro-dynamical modeling of the inner Galaxy suggest that the radius of the outer Lindblad resonance (OLR) of the Galactic bar lies in the vicinity of the Sun. How does this resonance affect the distribution function in the outer parts of a barred disk, and can we identify any effect of the resonance in the velocity distribution f(v) actually observed in the solar neighborhood? To answer these questions, detailed simulations of f(v) in the outer parts of an exponential stellar disks with nearly flat rotation curves and a rotating central bar have been performed. For a model resembling the old stellar disk, the OLR causes a distinct feature in f(v) over a significant fraction of the outer disk. For positions <2kpc outside the OLR radius and at bar angles of \~10-70 degrees, f(v) inhibits a bi-modality between the low-velocity stars moving like the local standard of rest (LSR) and a secondary mode of stars predominantly moving outward and rotating more slowly than the LSR. Such a bi-modality is indeed present in f(v) inferred from the Hipparcos data for late-type stars in the solar neighborhood. If one interpretes this observed bi-modality as induced by the OLR -- and there are hardly any viable alternatives -- then one is forced to deduce that the OLR radius is slightly smaller than Ro. Moreover, by a quantitative comparison of the observed with the simulated distributions one finds that the pattern speed of the bar is 1.85+/-0.15 times the local circular frequency, where the error is dominated by the uncertainty in bar angle and local circular speed. Also other, less prominent but still significant, features in the observed f(v) resemble properties of the simulated velocity distributions, in particular a ripple caused by orbits trapped in the outer 1:1 resonance.Comment: 14 pages, 10 figures (Fig.2 in full resolution available upon request), accepted for publication in A

Global Spiral Modes in NGC 1566: Observations and Theory

We present an observational and theoretical study of the spiral structure in galaxy NGC 1566. A digitized image of NGC 1566 in I-band was used for measurements of the radial dependence of amplitude variations in the spiral arms. We use the known velocity dispersion in the disk of NGC 1566, together with its rotation curve, to construct linear and 2D nonlinear simulations which are then compared with observations. A two-armed spiral is the most unstable linear global mode in the disk of NGC 1566. The nonlinear simulations are in agreement with the results of the linear modal analysis, and the theoretical surface amplitude and the velocity residual variations across the spiral arms are in qualitative agreement with the observations. The spiral arms found in the linear and nonlinear simulations are considerably shorter than those observed in the disk of NGC 1566. We argue therefore, that the surface density distribution in the disk of the galaxy NGC 1566 was different in the past, when spiral structure in NGC 1566 was linearly growing.Comment: 41 pages, 20 figures, to be published in the Astrophysical Journa

Properties of odd nuclei and the impact of time-odd mean fields: A systematic Skyrme-Hartree-Fock analysis

We present a systematic analysis of the description of odd nuclei by the Skyrme-Hartree-Fock approach augmented with pairing in BCS approximation and blocking of the odd nucleon. Current and spin densities in the Skyrme functional produce time-odd mean fields (TOMF) for odd nuclei. Their effect on basic properties (binding energies, odd-even staggering, separation energies and spectra) is investigated for the three Skyrme parameterizations SkI3, SLy6, and SV-bas. About 1300 spherical and axially-deformed odd nuclei with 16 < Z < 92 are considered. The calculations demonstrate that the TOMF effect is generally small, although not fully negligible. The influence of the Skyrme parameterization and the consistency of the calculations are much more important. With a proper choice of the parameterization, a good description of binding energies and their differences is obtained, comparable to that for even nuclei. The description of low-energy excitation spectra of odd nuclei is of varying quality depending on the nucleus

Nonlinear Effects in Models of the Galaxy: 1. Midplane Stellar Orbits in the Presence of 3D Spiral Arms

With the aim of studying the nonlinear stellar and gaseous response to the gravitational potential of a galaxy such as the Milky Way, we have modeled 3D galactic spiral arms as a superposition of inhomogeneous oblate spheroids and added their contribution to an axisymmetric model of the Galactic mass distribution. Three spiral loci are proposed here, based in different sets of observations. A comparison of our model with a tight-winding approximation shows that the self-gravitation of the whole spiral pattern is important in the middle and outer galactic regions. As a first step to full 3D calculations the model is suitable for, we have explored the stellar orbital structure in the midplane of the Galaxy. We present the standard analysis in the pattern rotating frame, and complement this analysis with orbital information from the Galactic inertial frame. Prograde and retrograde orbits are defined unambiguously in the inertial frame, then labeled as such in the Poincar\'e diagrams of the non-inertial frame. In this manner we found a sharp separatrix between the two classes of orbits. Chaos is restricted to the prograde orbits, and its onset occurs for the higher spiral perturbation considered plausible in our Galaxy.Comment: 23 pages, 22 Figures. Latex. Submitted to Ap

Sensing and adhesion are adaptive functions in the plant pathogenic xanthomonads

<p>Abstract</p> <p>Background</p> <p>Bacterial plant pathogens belonging to the <it>Xanthomonas </it>genus are tightly adapted to their host plants and are not known to colonise other environments. The host range of each strain is usually restricted to a few host plant species. Bacterial strains responsible for the same type of symptoms on the same host range cluster in a pathovar. The phyllosphere is a highly stressful environment, but it provides a selective habitat and a source of substrates for these bacteria. Xanthomonads colonise host phylloplane before entering leaf tissues and engaging in an invasive pathogenic phase. Hence, these bacteria are likely to have evolved strategies to adapt to life in this environment. We hypothesised that determinants responsible for bacterial host adaptation are expressed starting from the establishment of chemotactic attraction and adhesion on host tissue.</p> <p>Results</p> <p>We established the distribution of 70 genes coding sensors and adhesins in a large collection of xanthomonad strains. These 173 strains belong to different pathovars of <it>Xanthomonas </it>spp and display different host ranges. Candidate genes are involved in chemotactic attraction (25 genes), chemical environment sensing (35 genes), and adhesion (10 genes). Our study revealed that candidate gene repertoires comprised core and variable gene suites that likely have distinct roles in host adaptation. Most pathovars were characterized by unique repertoires of candidate genes, highlighting a correspondence between pathovar clustering and repertoires of sensors and adhesins. To further challenge our hypothesis, we tested for molecular signatures of selection on candidate genes extracted from sequenced genomes of strains belonging to different pathovars. We found strong evidence of adaptive divergence acting on most candidate genes.</p> <p>Conclusions</p> <p>These data provide insight into the potential role played by sensors and adhesins in the adaptation of xanthomonads to their host plants. The correspondence between repertoires of sensor and adhesin genes and pathovars and the rapid evolution of sensors and adhesins shows that, for plant pathogenic xanthomonads, events leading to host specificity may occur as early as chemotactic attraction by host and adhesion to tissues.</p

Genetic diversity of the African malaria vector Anopheles gambiae

The sustainability of malaria control in Africa is threatened by the rise of insecticide resistance in Anopheles mosquitoes, which transmit the disease1. To gain a deeper understanding of how mosquito populations are evolving, here we sequenced the genomes of 765 specimens of Anopheles gambiae and Anopheles coluzzii sampled from 15 locations across Africa, and identified over 50 million single nucleotide polymorphisms within the accessible genome. These data revealed complex population structure and patterns of gene flow, with evidence of ancient expansions, recent bottlenecks, and local variation in effective population size. Strong signals of recent selection were observed in insecticide-resistance genes, with several sweeps spreading over large geographical distances and between species. The design of new tools for mosquito control using gene-drive systems will need to take account of high levels of genetic diversity in natural mosquito populations