28 research outputs found
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How many species and under what names? Using DNA barcoding and GenBank data for west Central African amphibian conservation
Development projects in west Central Africa are proceeding at an unprecedented rate, often with little concern for their effects on biodiversity. In an attempt to better understand potential impacts of a road development project on the anuran amphibian community, we conducted a biodiversity assessment employing multiple methodologies (visual encounter transects, auditory surveys, leaf litter plots and pitfall traps) to inventory species prior to construction of a new road within the buffer zone of Moukalaba-Doudou National Park, Gabon. Because of difficulties in morphological identification and taxonomic uncertainty of amphibian species observed in the area, we integrated a DNA barcoding analysis into the project to improve the overall quality and accuracy of the species inventory. Based on morphology alone, 48 species were recognized in the field and voucher specimens of each were collected. We used tissue samples from specimens collected at our field site, material available from amphibians collected in other parts of Gabon and the Republic of Congo to initiate a DNA barcode library for west Central African amphibians. We then compared our sequences with material in GenBank for the genera recorded at the study site to assist in identifications. The resulting COI and 16S barcode library allowed us to update the number of species documented at the study site to 28, thereby providing a more accurate assessment of diversity and distributions. We caution that because sequence data maintained in GenBank are often poorly curated by the original submitters and cannot be amended by third-parties, these data have limited utility for identification purposes. Nevertheless, the use of DNA barcoding is likely to benefit biodiversity inventories and long-term monitoring, particularly for taxa that can be difficult to identify based on morphology alone; likewise, inventory and monitoring programs can contribute invaluable data to the DNA barcode library and the taxonomy of complex groups. Our methods provide an example of how non-taxonomists and parataxonomists working in understudied parts of the world with limited geographic sampling and comparative morphological material can use DNA barcoding and publicly available sequence data (GenBank) to rapidly identify the number of species and assign tentative names to aid in urgent conservation management actions and contribute to taxonomic resolution
Notes on the distribution and status of small carnivores in Gabon
The distribution and status of small carnivore species in Gabon have never been comprehensively assessed. We collated data from general wildlife surveys, camera-trap and transect studies and analyses of bushmeat consumption and trade, to map their country-wide occurrence and assess current exploitation levels. Records of Common Slender Mongoose Herpestes sanguineus and Cameroon Cusimanse Crossarchus platycephalus represent the first confirmation of their occurrence in Gabon. Cameroon Cusimanse was believed to extend into north-east Gabon, but the Slender Mongoose records extend its known range well outside that previously suspected. We furthermore extended the known range for Egyptian Mongoose Herpestes ichneumon. Crested Genet Genetta cristata has also been proposed to occur in Gabon but our records were not suited to evaluating this possibility given the difficulties of separation from Servaline Genet G. servalina. Most species appear to be distributed widely across the country. While several are commonly recorded in hunter catch and bushmeat markets, they form only a small proportion (3.4% and 3.1%, respectively) of all bushmeat records. However, in proximity to settlements, small carnivore exploitation, for bushmeat and use of body parts in traditional ceremonies, appears to have adverse effects on species richness and abundance
Mise au point d'un protocole de suivi parasitaire de primates libres en forêt tropicale et premiers résultats
Une étude des parasites helminthiques du tube digestif de chimpanzés (Pan troglodytes) et de gorilles (Gorilla gorilla) a été menée dans le parc national de Conkouati-Douli (République du Congo). Les objectifs étaient de standardiser la méthode de suivi du parasitisme de chimpanzés relâchés, de comparer les résultats avec ceux des populations de primates sauvages locales et d'identifier des facteurs de variation du parasitisme.NANTES-Ecole Nat.Vétérinaire (441092302) / SudocSudocFranceF
Bushmeat Hunting Alters Recruitment of Large-seeded Plant Species in Central Africa
International audienc
Data from: Hypothesis-driven and field-validated method to prioritize fragmentation mitigation efforts in road projects
The active field of connectivity conservation has provided numerous methods to identify wildlife corridors with the aim of reducing the ecological effect of fragmentation. Nevertheless, these methods often rely on untested hypotheses of animal movements, usually fail to generate fine-scale predictions of road crossing sites, and do not allow managers to prioritize crossing sites for implementing road fragmentation mitigation measures. We propose a new method that addresses these limitations. We illustrate this method with data from southwestern Gabon (central Africa). We used stratified random transect surveys conducted in two seasons to model the distribution of African forest elephant (Loxodonta cyclotis), forest buffalo (Syncerus caffer nanus), and sitatunga (Tragelaphus spekii) in a mosaic landscape along a 38.5 km unpaved road scheduled for paving. Using a validation data set of recorded crossing locations, we evaluated the performance of three types of models (local suitability, local least-cost movement, and regional least-cost movement) in predicting actual road crossings for each species, and developed a unique and flexible scoring method for prioritizing road sections for the implementation of road fragmentation mitigation measures. With a data set collected in <10 weeks of fieldwork, the method was able to identify seasonal changes in animal movements for buffalo and sitatunga that shift from a local exploitation of the site in the wet season to movements through the study site in the dry season, whereas elephants use the entire study area in both seasons. These three species highlighted the need to use species- and season-specific modeling of movement. From these movement models, the method ranked road sections for their suitability for implementing fragmentation mitigation efforts, allowing managers to adjust priority thresholds based on budgets and management goals. The method relies on data that can be obtained in a period compatible with environmental impact assessment constraints, and is flexible enough to incorporate other potential movement models and scoring criteria. This approach improves upon available methods and can help inform prioritization of road and other linear infrastructure segments that require impact mitigation methods to ensure long-term landscape connectivity
RoadFragmentationDataset
This dataset accompanies Vanthomme H., Kolowski J., Nzamba, B.S., Alonso A. 2015. Hypothesis-driven and field-validated method to prioritize fragmentation mitigation efforts in road projects. Ecological Applications (in press). It contains a copy of the main data file exactly as used for this paper
Appendix B. Spatial aggregation of actual crossings points.
Spatial aggregation of actual crossings points