Multi-Script Morphological Transducers And Transcribers For Seven Turkic Languages

This paper describes ongoing work to augment morphological transducers for seven Turkic languages with support for multiple scripts each, as well as respective IPA transcription systems. Evaluation demonstrates that our approach yields coverage equivalent to or not much lower than that of the base transducers

UD Annotatrix: An Annotation Tool For Universal Dependencies

In this paper we introduce the UD Annotatrix annotation tool for manual annotation of Universal Dependencies. This tool has been designed with the aim that it should be tailored to the needs of the Universal Dependencies (UD) community, including that it should operate in fully-offline mode, and is freely-available under the GNU GPL licence. In this paper, we provide some background to the tool, an overview of its development, and background on how it works. We compare it with some other widely-used tools which are used for Universal Dependencies annotation, describe some features unique to UD Annotatrix, and finally outline some avenues for future work and provide a few concluding remarks

Machine Translation for Crimean Tatar to Turkish

In this paper a machine translation system for Crimean Tatar to Turkish is presented. To our knowledge this is the first Machine Translation system made available for public use for Crimean Tatar, and the first such system released as free and open source software. The system was built using Apertium, a free and open source machine translation system, and is currently unidirectional from Crimean Tatar to Turkish. We describe our translation system, evaluate it on parallel corpora and compare its performance with a Neural Machine Translation system, trained on the limited amount of corpora available

Quaking Aspen Ecology on Forest Service Lands North of Yellowstone National Park

Quaking aspen (Populus tremuloides) occupy a small area in the northern Rocky Mountains, but are highly valued as wildlife habitat. Aspen stands in and around Yellowstone National Park commonly consist of few, large, mature overstory stems and numerous root suckers that do not grow above the browsing reach (≈ 2 m) of most wild ungulates. Our primary objective was to determine if the recruitment or density of aspen stems \u3e 2 m tall had changed from 1991 to 2006 on a portion of the Gallatin National Forest. The same aspen stands were surveyed in 1991 and 2006 in the 560 km² study area (n = 316). Secondary objectives were to determine if aspen density was influenced by elk (Cervus elaphus) browsing, conifer establishment, and cattle (Bos spp.) grazing. Mean recruitment stem density did not change from 1991 to 2006 (P = 0.95). Density of stems \u3e 2 m declined 12 percent from 1991 to 2006 (P = 0.04), which indicates that recruitment stems are not being produced at a sufficient rate to replace aging overstories. Areas with the greatest elk densities had the lowest recruitment stem densities and contributed the most to the decline. Although elk browsing seemed to play the largest role, conifer establishment and cattle grazing have also negatively impacted overstory recruitment in aspen stands. Even though elk numbers on the Northern Yellowstone Winter Range have declined since wolf reintroduction, aspen recruitment has not increased at the landscape level on the Gallatin National Forest

Restoring Aspen Riparian Stands With Beaver on the Northern Yellowstone Winter Range

Aspen (Populus tremuloides) on the Gardiner Ranger District, Gallatin National Forest, have declined over the last half-century. In an attempt to reverse this trend, beaver (Castor canadensis) were reintroduced in Eagle Creek in 1991. In 2005, we assessed the long-term effects of beaver on aspen stands and the associated riparian area in the Eagle Creek drainage. Aspen recovery was estimated by comparing vegetative changes among control sites with \u3c10 percent beaver use\u3e(n = 5), active beaver sites (n = 6), sites abandoned for 1 to 3 years (n = 7), sites abandoned for 4 to 6 years (n = 4), and sites abandoned for 7 to 11 years (n = 5). Aspen stem densities in active sites and sites abandoned by beaver for 1 to 3 years were similar (2.6/m2) and greater (P = 0.01) than the remaining sites. Sprout and sapling densities were greater (P = 0.01) on active and sites abandoned for 1 to 3 years compared to the other sites. Aspen suckers were not able to grow taller than 2m on sites without beaver activity for 4 to 1 years, which prevented aspen recovery. Beaver activity stimulated the growth of aspen sprouts and saplings, but ungulate herbivory prevented successful aspen recovery in Eagle Creek

Grizzly Bears and Humans at Alpine Moth Sites in Wyoming, USA

Army cutworm moths (Euxoa auxiliaris; moths) are an important seasonal higher elevational food source for grizzly bears (Ursus arctos horribilis; bears) in the Greater Yellowstone Ecosystem (Wyoming, Montana, and Idaho, USA). Increased human interaction with bears at moth sites is an important management issue because of the potential for displacing bears and the concern for human safety. Managers will need better information regarding human–bear interactions at high-density moth sites that are also accessible to humans to mitigate potential conflicts. In the summers of 2017 and 2018, we studied human–bear interactions at 2 of the most human accessible moth sites in the Shoshone National Forest, Wyoming. We completed 293 bear surveys and documented 266 bear observations. We also recorded human-use levels at the 2 study sites (north site: 3 groups/year; south site: 35 groups/year). We documented 43 interactions (at the south site only) and obtained location data for 29 interactions. During human–bear interactions, bears strongly avoided humans 80% of the time and had no apparent reaction 20% of the time. Our results indicated that human safety and bear displacement are valid management concerns at the south site. Human safety concerns were most apparent in mountain climbing groups with small group sizes (people, n = 64/70) that were unprepared for encounters with bears. Management concerns for human safety and bear displacement are much lower at the north site. We recommend placing information kiosks at trailheads to inform hikers of dangers associated with grizzly bear concentrations on moth sites

Rule-Based Machine Translation From Kazakh To Turkish

This paper presents a shallow-transfer machine translation (MT) system for translating from Kazakh to Turkish. Background on the differences between the languages is presented, followed by how the system was designed to handle some of these differences. The system is based on the Apertium free/open-source machine translation platform. The structure of the system and how it works is described, along with an evaluation against two competing systems. Linguistic components were developed, including a Kazakh-Turkish bilingual dictionary, Constraint Grammar disambiguation rules, lexical selection rules, and structural transfer rules. With many known issues yet to be addressed, our RBMT system has reached performance comparable to publicly-available corpus-based MT systems between the languages

Snowshoe Hare use of Silviculturally Altered Conifer Forests in The Greater Yellowstone Ecosystem

Information about snowshoe hare habitat use in key Canada lynx recovery areas, such as the Greater Yellowstone Ecosystem, is critical for the conservation of lynx. Although research conclusions differ in regard to the types and ages of forests preferred by snowshoe hares, restrictions on silvicultural practice have been implemented by forest managers to protect snowshoe hares in this area. However, some research suggests that regenerating lodgepole pine stands associated with silvicultural treatments benefit snowshoe hares. We evaluated three indices of snowshoe hare use within a timber management area in southwest Montana, inside the Greater Yellowstone Ecosystem (1999–2012) to assess the relative use of forest types. We analyzed: 1) 11 years of data collected from 280 pellet plots using linear mixed models and AICc model selection, 2) 13 years of track counts from 2,202 km of roadway travel using Chi-squared goodness-of-fit tests of proportional segment lengths and the associated cover types, and 3) 76 nights over one winter of live-trapping using a hare/night index. Overall, we observed the greatest use within the youngest two classes of regenerating lodgepole pine stands that were associated with clear cutting and pre-commercial thinning. These results suggest snowshoe hares prefer silviculturally influenced 30–60 years old lodgepole pine forests

Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake

The genomic causes and effects of divergent ecological selection during speciation are still poorly understood. Here, we report the discovery and detailed characterization of early-stage adaptive divergence of two cichlid fish ecomorphs in a small (700m diameter) isolated crater lake in Tanzania. The ecomorphs differ in depth preference, male breeding color, body shape, diet and trophic morphology. With whole genome sequences of 146 fish, we identify 98 clearly demarcated genomic ‘islands’ of high differentiation and demonstrate association of genotypes across these islands to divergent mate preferences. The islands contain candidate adaptive genes enriched for functions in sensory perception (including rhodopsin and other twilight vision associated genes), hormone signaling and morphogenesis. Our study suggests mechanisms and genomic regions that may play a role in the closely related mega-radiation of Lake Malawi.The work was funded by Royal Society-Leverhulme Trust Africa Awards AA100023 and AA130107 (M.J.G., B.P.N. and G.F.T.), a Wellcome Trust PhD studentship grant 097677/Z/11/Z (M.M.), Wellcome Trust grant WT098051 (S.S. and R.D.), Wellcome Trust and Cancer Research UK core support and a Wellcome Trust Senior Investigator Award (E.A.M.), a Leverhulme Trust Research Fellowship RF-2014-686 (M.J.G.), a University of Bristol Research Committee award (M.G.), a Bangor University Anniversary PhD studentship (to A.M.T.) and a Fisheries Society of the British Isles award (G.F.T.). Raw sequencing reads are in the SRA nucleotide archive: RAD sequencing (BioProject: PRJNA286304; accessions SAMN03768857 to SAMN03768912) and whole genome sequencing (BioProject PRJEB1254: sample accessions listed in Table S16). The RAD based phylogeny and alignments have been deposited in TreeBase (TB2:S18241). Whole genome variant calls in the VCF format, phylogenetic trees, and primer sequences for Sequenom genotyping are available from the Dryad Digital Repository (http://dx.doi.org/10.5061/dryad.770mc). RD declares his interests as a founder and non-executive director of Congenica Ltd., that he owns stock in Illumina from previous consulting, and is a scientific advisory board member of Dovetail Inc. We thank R. Schley for generating pharyngeal jaw data; S. Mzighani, J. Kihedu and staff of the Tanzanian Fisheries Research Institute for logistical support; A. Smith, H. Sungani, A. Shechonge, P. Parsons, J. Swanstrom, G. Cooke and J. Bridle for contributions to sampling and aquarium maintenance, the Sanger Institute sequencing core for DNA sequencing and Dr. H. Imai (Kyoto University) for the use of spectrometer in his laboratory.This is the author accepted manuscript. The final version is available from AAAS via http://dx.doi.org/10.1126/science.aac992