Profile of sensitivity and resistance to antibiotics of Staphylococcus aureus strains isolated from patients fluids in medical biology department of National Public Health Laboratory of Ouagadougou, Burkina Faso

Staphylococcus aureus is a bacterial specie that opposed more resistance again many antibiotics. This study aimed to determine the resistance profile of Staphylococcus aureus isolated from biological patient’s liquids. A total of 303 samples including urine and vaginal pus samples from human were collected. The susceptibility of antibiotic resistance profile of isolated strains was determined in agar medium by the diffusion method. The highest sensitivity was observed with gentamicin (25/25), vancomycin (24/25), rifampicin (24/25) and fusidic acid (25/25). The most important resistances were obtained with cotrimoxazole (15/25), nalidixic acid (17/25), oxacillin (20/25) and penicillins G (23/25). Age and sex of patients have few impacts on the resistance  profile.Keywords: Staphylococcus aureus; resistance; sensibility; antibiotics; Burkina Faso

Antimicrobial susceptibility of extended-spectrum beta-lactamase producing Enterobacteriaceae causing urinary tract infections in Ouagadougou, Burkina Faso

Objective: To determine the frequency of extended-spectrum beta lactamase producing Enterobacteriaceae (ESBL) and other antibioticsresistant bacteria in urinary tract isolates.Study Design: prospective and experimental study.Methodology: Place and duration of study :YalgadoOuedraogo University Hospital Center, Charles De Gaulle Pediatric Hospital Center, Saint Camille Hospital and National Public Health Laboratory, Ouagadougou, from November 2014 to October 2015.AllEnterobacteriaceaestrains isolated from urinary samples of patients were identifiedusing API 20E chemical gallery (BioMerieux, France). All strains were subjected to an array of 14 antibiotics to study their drug susceptibility by using Kirby- Baeurdisk diffusion method. Detection of ESBL was carried out by double disk diffusion technique. Statistical analysis was performed by Microsoft Excel and Anova one-way GrapPad Prism version 5.01. Chi-square (χ2) test was used to determine significance. A p˂ 0.05was considered to be statistically significant.Results: A total of 324 isolates of Enterobacteriaceae were identified during the study period, including211(65%) E. coli, 75 (23%)Klebsiella spp., 18 (6%) Enterobacter spp., 11 (3%)Proteus spp., 5 (2%) Citrobacter spp., Serratia spp. 3 (1%).All the clinical isolates were susceptible to imipenem. Resistance to amikacinwas 14% (45/324); gentamicin 54% (175/324); tobramycin 58% (187/324); nalidixic acid 72% (234/324),ciprofloxacin 63% (204/324) and to cotrimoxazole 83% (269/324).The overall rate of the EBSL producing strains was 35% (114/324). Their susceptibility to antibiotics was (imipenem,amikacin, cefoxitin and fosfomycin) 100% (114/114), 93% (106/114), 74% (84/114) and 84% (96/114) respectively. ESBL positivity within individual organism group was highest inEscherichia coli 64% (73/324) followed byKlebsiellaspp. 28% (32/324), Enterobacterspp. 3% (4/324), Proteus spp. and Citrobacterspp. 2% (2/324).Conclusion: The results showeda high frequency of ESBL producing Enterobacteriaceae, especially Escherichia coli and Klebsiellaspp. The data points to theneed of routine detection and surveillance of ESBL producing bacteria in Burkina Faso.Keywords: Antimicrobial susceptibility, Enterobacteriaceae, Urine, Burkina Fas

Methodological guide: Community participatory inventory and prioritization of climate-smart crop-livestock agroforestry technologies / practices

This guide addresses the issue of identifying priority interventions for communities in the face of climate change. The manual is about participatory approach of inventorizing and prioritizing climate-smart crop-livestock-agroforestry and social technologies / practices. The guide provides a step by step guidance on how project/extension workers can work with communities and other development stakeholders in the target sites to identify practices that can help local communities to better adapt to climate variability in production. The guide was developed within the framework of a project “Building resilient agro-sylvo-pastoral systems in West Africa through participatory action research” (BRAS-PAR)” which is one ofthe flagship 2 projects funded by the CGIAR Research Program on Climate Change Agriculture and Food Security (CCAFS). The flagship 2 of CCAFS, which is about climate-smart technologies and practices, addresses the challenge of how to transition to a climate-smart agriculture (CSA) at a large scale for enabling agricultural systems to be transformed and reoriented to support food security under the new realities of climate change. Led by ICRAF-WCA/Sahel, the BRAS-PAR project is being implemented by a consortium of National research institutes in Burkina Faso, Ghana, Niger and Senegal, IUCN, and ILRI

Guide methodologique: Méthode communautaire participative d’inventaire et de priorisation des technologies / pratiques d’agriculture élevage-agroforesterie climato-intelligentes

Ce guide traite des questions d’identification des interventions prioritaires pour les communautés dans le contexte du changement climatique. Il s’agit d’une approche participative d’inventaire et de priorisation des technologies / pratiques d’agriculture-élevage-agroforesterie et sociales climato-intelligentes. Le guide fournit aux agents de terrain un accompagnement et́ape par et́ape pour travailler avec les acteurs clédans les sites cibles, pour identifier les pratiques prometteuses qui aideraient ces derniers às’adapter aux variabilités climatiques dans leurs activités de production. Le guide a étéproduit dans le cadre d’un projet “Building resilient agro-sylvopastoral systems in West Africa through participatory action research” (BRASPAR)” qui est l’un des projets de la Composante 2 financée par le programme de recherche du CGIAR sur les Changements Climatiques, l’Agriculture etla Seć urité Alimentaire (CCAFS). La composante 2 du CCAFS, quitraite des pratiques ettechnologies climato-intelligentes, s’attaque aux défis de comment passer àune agriculture climato-intelligente (ACI) àplus grande échelle pour permettre aux system̀ es agricoles d’et̂re transformeś et reó rienteś pour soutenir la seć uritéalimentaire dans le contexte actuel de changement climatique. Pilotépar l’ICRAFWCA/Sahel, le projet BRAS- PAR est mis en œuvre au Burkina Faso, Ghana, Niger et Seń eǵ al par un consortium d’institutions nationales de recherche (INERA, SARI, INRAN et ISRA), IUCN et ILRI

Risk factors associated with HIV prevalence in pregnant women in Burkina Faso, from 2006 to 2014

Purpose of the study: To determine the socio-demographic factors influencing the dynamics of HIV prevalence among pregnant women in Burkina Faso.Material and methods: A total of 66,597 pregnant women from the 13 health regions of Burkina Faso were included in this study conducted between 2006 and 2014. Venous blood samples were collected and analyzed for the detection of HIV antibodies according to WHO / UNAIDS strategy II, using the mixed test Vironostika HIV Uniform II Plus O (Bio-Mérieux) and the test discriminating ImmunoCombII HIV-1 & 2 BiSpot (Orgenics). Samples with discordant results between the two tests, as well as those positive to HIV-2 or HIV-1 + 2, were retested with HIV BLOT 2.2 (MP Diagnostics). Sociodemographic data collected from the participants were correlated with their HIV status to determine key risk factors influencing HIV infection prevalence in Burkina Faso.Results: Sociodemographic data showed that the study population consisted mainly of married women (91.2%) at their first pregnancy (27.1%) with a large majority of them being housewives (86.2%) who did not attend any form of schooling (69.4%). About 88.4% had stayed longer than a year in the health region where they initially participated in the study and 55.8% were between 20 and 29 years of age. Overall HIV prevalence significantly dropped from 2.7 % in 2006 to 1.3% in 2014. However HIV seroprevalence in this study has varied significantly according to socio-demographic characteristics including marital status, parity, occupation, education, age group and the length of stay in the women's health community (p <0.0001). Factors sustaining HIV transmission included the status of being unmarried (OR=1.67 [1.42-1.97]), primigest (OR=1.64 [1.41-1.89]), having other occupations except being student (OR = 1.68 [1.20-2.33]), aged between 20-49 years (OR=3.14 [2.51-3.93]) and the duration of stay less than a year in their locality (OR=5.33 [4.61-10.16]) and these factors were identified as main risk factors associated with HIV prevalence.Conclusion: Burkina Faso remains among the countries with concentrated epidemics despite a significant reduction in the prevalence observed in this study. The inclusion of identified risk factors in the national HIV program could improve the quality of the response to the epidemic.Keywords: HIV-Pregnant Women-Risk Factors-Burkina Fas

Prevalence of Escherichia coli virulence genes in patients with diarrhoea in Ouagadougou, Burkina Faso

Objective: Diarrhoeagenic E. coli (DEC) strains are important causes of diarrhoea in the developing world and, to a lesser extent, inthe developed world. In this study, we investigated the prevalence of the virulence genes specific for five major pathogroups of diarrheagenic Escherichia coli (DEC) in primary cultures from diarrhoeagenic patients in Burkina Faso.Methodology: From September 2016 to Mars 2017, a total of 211 faecal samples from diarrhoeagenic patients from urban hospitals of Ouagadou, Burkina Faso have been analysed. A 16-plex PCR was used to detect simultaneously, the five major DEC pathotypes (enteropathogenic E. coli (EPEC), enterotoxigenic E. coli (ETEC), Shiga toxin-producing E. coli (STEC), enteroaggregative E. coli (EAEC) and enteroinvasive E. coli (EIEC)).Results: At least one diarrhoeagenic E. Coli pathotype was detected in 31 samples (14.7%) in children and adults with diarrhoea. EAEC was the most common pathotype detected 9.5% (20/211), followed by EIEC2.4% (05/211) and STEC 0.5% (01/211). More than one DEC pathotype were detected in 2.4% (05/211) patients. EPEC and ETEC were not detected in single infection but in co-infection with others pathotypes.Conclusion: DEC, especially enteroaggregative, may be important responsible of diarrhoeas in Burkina Faso from all ages patient.Key Words: Diarrhoeagenic Escherichia coli, 16-plex PCR, Burkina Faso, human diarrhoeas stool

In silico identification of a candidate synthetic peptide (Tsgf1(18-43)) to monitor human exposure to tsetse flies in West Africa

Background: The analysis of humoral responses directed against the saliva of blood-sucking arthropods was shown to provide epidemiological biomarkers of human exposure to vector-borne diseases. However, the use of whole saliva as antigen presents several limitations such as problems of mass production, reproducibility and specificity. The aim of this study was to design a specific biomarker of exposure to tsetse flies based on the in silico analysis of three Glossina salivary proteins (Ada, Ag5 and Tsgf1) previously shown to be specifically recognized by plasma from exposed individuals. Methodology/Principal Findings: Synthetic peptides were designed by combining several linear epitope prediction methods and Blast analysis. The most specific peptides were then tested by indirect ELISA on a bank of 160 plasma samples from tsetse infested areas and tsetse free areas. Anti-Tsgf1(18-43) specific IgG levels were low in all three control populations (from rural Africa, urban Africa and Europe) and were significantly higher (p < 0.0001) in the two populations exposed to tsetse flies (Guinean HAT foci, and South West Burkina Faso). A positive correlation was also found between Anti-Tsgf1(18-43) IgG levels and the risk of being infected by Trypanosoma brucei gambiense in the sleeping sickness foci of Guinea. Conclusion/Significance: The Tsgf1(18-43) peptide is a suitable and promising candidate to develop a standardize immunoassay allowing large scale monitoring of human exposure to tsetse flies in West Africa. This could provide a new surveillance indicator for tsetse control interventions by HAT control programs

Multi-Actors' Co-Implementation of Climate-Smart Village Approach in West Africa: Achievements and Lessons Learnt

Climate change and variability are significant challenges for the environment and food security worldwide. Development strategies focusing simultaneously on adaptive farming, productivity, and reducing greenhouse gas (GHG) emissions-known as climate-smart agriculture (CSA) strategies-are key to responding to these challenges. For almost a decade, within the framework of Climate Change, Agriculture and Food Security (CCAFS), World Agroforestry (ICRAF), and its partners have been using Participatory Action Research (PAR) to fully engage key stakeholders in co-creating such CSA development strategies. This includes the testing of Agricultural Research for Development (AR4D) CSA scalability options. The multidisciplinary teams include the National Research and Extension Systems (NARES), national meteorological services (NMS), non-profit organizations (NGOs), and local radio programs, among others. The CCAFS-West Africa Program,World Agroforestry-West and Central Africa (ICRAF-WCA), International Union for Conservation of Nature (IUCN), University of Reading, and Centre Régional de Formation et d’Application en Agro-météorologie et Hydrologie Opérationnelle (AGRHYMET) provide technical backstopping to the national teams. Climate information (CI) was used as an entry point to inform the development of CSA technologies and practices within Climate-Smart Villages (CSV). This groundwork has led to a greater understanding of three critical factors for successful CSV implementation: (1) Building strong partnerships to co-design and develop agricultural systems that improve ecosystemand population resilience, (2) Key stakeholders (researchers, farmers, development agents, and students) capacity strengthening through vocational and academic training, and (3) Using CI for livelihood planning at all scales. These three factors support more effective identification and testing of agricultural technologies and practices addressing climate variability and change at plot, community, and landscape levels. This paper discusses the PAR-CSA methodology and parameters for evaluation, including biophysical and social change. Keys to success, including communication, knowledge sharing tools, and scalability are also discussed. Finally, future opportunities for improvement are presented, including knowledge product development, CSA policy and investment planning, capacity building, further engagement of the private sector, and additional research on existing practices and tools

Insights into the benefits of farmer led approaches in promoting sustainable agricultural intensification

Farmers make agricultural decisions based on a holistic understanding of their farm and it’s place in and interactions with the surrounding landscape. Because of this they often resist conventional agricultural intensification practices which they see as negatively impacting agricultural and environmental resources in the medium to long term. Ecosystem Based Management (EBM) practices have long-lasting positive effects on soils, water resources, trees, grasses and agricultural yields, and have multiple economic benefits that go beyond cash, to include ecosystem services, well-being and quality of life EBM should be adopted by women and men farmers and integrated into all agricultural and natural resource management planning and implementation Greater investment by government departments, and the development community, in EBM will have a significant, long term positive impact on food security, livelihoods and ecosystem healt