30 research outputs found

    pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs

    Get PDF
    We study here a DNA oligonucleotide having the ability to form two different i-motif structures whose relative stability depends on pH and temperature. The major species at neutral pH is stabilized by two C:C+ base pairs capped by two minor groove G:C:G:C tetrads. The high pH and thermal stability of this structure are mainly due to the favorable effect of the minor groove tetrads on their adjacent positively charged C:C+ base pairs. At pH 5, we observe a more elongated i-motif structure consisting of four C:C+ base pairs capped by two G:T:G:T tetrads. Molecular dynamics calculations show that the conformational transition between the two structures is driven by the protonation state of key cytosines. In spite of large conformational differences, the transition between the acidic and neutral structures can occur without unfolding of the i-motif. These results represent the first case of a conformational switch between two different i-motif structures and illustrate the dramatic pH-dependent plasticity of this fascinating DNA motif

    Las matemáticas para la empresa : un reto pendiente

    Get PDF
    El fracaso académico en las asignaturas relacionadas con las Matemáticas en la Facultad de Ciencias Empresariales de la Universidad de Huelva es una realidad ampliamente contrastada. La falta de una base sólida para afrontar los nuevos conocimientos, unida a la ausencia de un esfuerzo personal diario y a una aversión generalizada entre nuestros alumnos hacia las Matemáticas, sean quizás las causas principales de esos resultados adversos. Hemos realizado un estudio, mediante un cuestionario elaborado para tal fin y contestado por los alumnos el primer día de clase, sobre los conocimientos matemáticos básicos con los que llegan éstos al primer curso de nuestra Facultad. El objetivo es establecer un marco de actuación adecuado para enfrentarnos a la docencia de nuestras asignaturas e intentar paliar, en lo posible, las carencias del alumnado

    Nurses' perceptions of aids and obstacles to the provision of optimal end of life care in ICU

    Get PDF
    Contains fulltext : 172380.pdf (publisher's version ) (Open Access

    Evolution and domestication of lima bean in Mexico : Evidence from ribosomal DNA

    No full text
    Phaseolus lunatus L., Lima bean, has been domesticated at least twice in the Americas, once in the Andean region and at another time in Mesoamerica; however, the domestication history of this crop in the latter region remains unclear. In this study, a phylogeographic analysis of DNA polymorphisms in the internal transcribed spacer (ITS) region of the ribosomal DNA from a collection of wild and domesticated accessions was applied to establish where and how many times in Mesoamerica Lima bean was domesticated. The results showed evidence for two wild Mesoamerican gene pools with contrasting geographical distributions. While the MI gene pool occurs in central western Mexico, including the Pacific coastal range, the MII gene pool is widespread and occurs toward the Gulf of Mexico, the Yucatan peninsula, and Central and South America. In a cluster analysis, all Mesoamerican landraces clustered together with wild accessions from the MI gene pool (L haplotype) suggesting a unique domestication event in central western Mexico. The most likely domestication region is an area of the states of Nayarit–Jalisco or Guerrero–Oaxaca and not areas such as the Peninsula of Yucatan where the crop is currently widespread and diverse. A strong founder effect due to domestication was quantified and several recently diversified haplotypes were identified. A hypothesis about possible dispersal routes of the crop within Mesoamerica is proposed as well as an apparent late adoption of the crop into the milpa system
    corecore