Inter- and intra-plate deformation at North American plate boundaries

A geodetic network which spans the region between San Francisco and Lake Tahoe has been measured 5 times completely with triangulation in 1880, 1922, 1929, 1943, 1963. A resurvey with the Global Positioning System (GPS) in 1991 allows the formation of 1 coseismic and 4 interseismic epochs. The data from this network provide a unique opportunity to examine the temporal and spatial evolution of the strain field associated with the 1906 San Francisco earthquake in particular and with the Pacific-North American plate boundary in general. Calculations of strain rate from the network data lead to the following conclusions. (1) There is no resolvable (greater than 0.05 microradians/yr) strain in between Sutter Buttes and the Sierra Nevada. (2) Throughout the time since the 1906 earthquake, a region extending at least as far east as the westernmost Great Valley has been undergoing deformation related to Pac:Nam interaction and the associated earthquake cycle. (3) In the time and space of overlap, our results agree with those from the United States Geological Survey (USGS) trilateration data. Both data sets indicate that strain must be accumulating to the east of Vaca. (4) The San Andreas discrepancy cannot be accommodated in the Great Valley at the 1 sigma level of our results. It is possible to absorb it in that region at the 2 sigma level. (5) Strain rate is elevated in the years following the earthquake and decays slowly with time. It is possible that the rate in the Coast Ranges increases until around 1950 and then decays. With the exception of one epoch, strain rate in the Coast Ranges is consistently fault parallel, shows no sign changes, and is consistent with monotonic strain accumulation

Kinematics of the New Zealand Plate Boundary: Relative Motion by GPS Across Networks of 1000 km and 50 km Spacing

From the 1995-97 data we are able to estimate interseismic velocities - the original aim of the project - though corrections must first be made for the coseismic effects of the Cass earthquake and postseismic effects of the Arthur's Pass event. In the following, we present four sets of results: (1) Interseismic velocities, (2) Arthur's Pass earthquake - coseismic, (3) Cass earthquake, and (4) Arthur's Pass earthquake postseismic. Work on all these fronts is still incomplete, but is being actively continued with funding from the NZ Foundation for Research, Science and Technology (FRST)

A near-infrared variability study in the cloud IC1396W: low star-forming efficiency and two new eclipsing binaries

Identifying the population of young stellar objects (YSOs) in high extinction regions is a prerequisite for studies of star formation. This task is not trivial, as reddened background objects can be indistinguishable from YSOs in near-infrared colour-colour diagrams. Here we combine deep JHK photometry with J- and K-band lightcurves, obtained with UKIRT/WFCAM, to explore the YSO population in the dark cloud IC1396W. We demonstrate that a colour-variability criterion can provide useful constraints on the star forming activity in embedded regions. For IC1396W we find that a near-infrared colour analysis alone vastly overestimates the number of YSOs. In total, the globule probably harbours not more than ten YSOs, among them a system of two young stars embedded in a small (~10000 AU) reflection nebula. This translates into a star forming efficiency SFE of ~1%, which is low compared with nearby more massive star forming regions, but similar to less massive globules. We confirm that IC1396W is likely associated with the IC1396 HII region. One possible explanation for the low SFE is the relatively large distance to the ionizing O-star in the central part of IC1396. Serendipitously, our variability campaign yields two new eclipsing binaries, and eight periodic variables, most of them with the characteristics of contact binaries.Comment: 13 pages, 10 figures, MNRAS, in pres

Parasites of the Spotted Sucker, Minytrema melanops (Cypriniformes: Catostomidae) from Arkansas and Oklahoma

During October 2015, March and April 2016 and again between March and April 2017, 15 Spotted Sucker (Minytrema melanops) were collected from sites in the Ouachita (n = 5), Red (n = 1), and St. Francis (n = 5) river drainages, Arkansas, and the Arkansas River drainage, Oklahoma (n = 4), and examined for protozoan and metazoan parasites. Found were Calyptospora sp., Myxobolus sp., Pseudomurraytrema alabarrum, Biacetabulum banghami, Penarchigetes oklensis, and Acanthocephalus sp. New host and distributional records are documented for these parasites

Fault healing inferred from time dependent variations in source properties of repeating earthquakes

We analyze two sets of repeating earthquakes on the Calaveras fault to estimate in-situ rates of fault strengthening (healing). Earthquake recurrence intervals t, range from 3 to 803 days. Variations in relative moment and duration are combined to study changes in stress drop, rupture dimension, rupture velocity, and particle velocity as a function of tr. Healing rates and source variations are compared with predictions of laboratory derived friction laws. Two interpretations of event duration τ are used: one in which τ: is given by the ratio of slip to particle velocity and one in which it scales as rupture dimension divided by rupture velocity. Our data indicate that faults strengthen during the interseismic period. We infer that source dimension decreases with tr due to aseismic creep within the region surrounding the repeatinge vents. Stress drop increases 1-3MPa per decade increase in tr, which represents an increase of a factor of 2-3 relative to events with tr between 10 and 100 days. This rate of fault healing is consistent with extrapolations of laboratory measurements of healing rates if fault strength is high, on order of 60MPa, ands tress drop is roughly 10% of this value

Safety Aspects, Tolerability and Modeling of Retinofugal Alternating Current Stimulation

Background While alternating current stimulation (ACS) is gaining relevance as a tool in research and approaching clinical applications, its mechanisms of action remain unclear. A review by Schutter and colleagues argues for a retinal origin of transcranial ACS’ neuromodulatory effects. Interestingly, there is an alternative application form of ACS specifically targeting α-oscillations in the visual cortex via periorbital electrodes (retinofugal alternating current stimulation, rACS). To further compare these two methods and investigate retinal effects of ACS, we first aim to establish the safety and tolerability of rACS. ObjectiveThe goal of our research was to evaluate the safety of rACS via finite-element modeling, theoretical safety limits and subjective report. Methods20 healthy subjects were stimulated with rACS as well as photic stimulation and reported adverse events following stimulation. We analyzed stimulation parameters at electrode level as well as distributed metric estimates from an ultra-high spatial resolution magnetic resonance imaging (MRI)-derived finite element human head model and compared them to existing safety limits. ResultsTopographical modeling revealed the highest current densities in the anterior visual pathway, particularly retina and optic nerve. Stimulation parameters and finite element modeling estimates of rACS were found to be well below existing safety limits. No serious adverse events occurred. ConclusionOur findings are in line with existing safety guidelines for retinal and neural damage and establish the tolerability and feasibility of rACS. In comparison to tACS, retinofugal stimulation of the visual cortex provides an anatomically circumscribed model to systematically study the mechanisms of action of ACS

Distinguishing the vegetation and soil component of δ13C variation in speleothem records from degassing and prior calcite precipitation effects

The carbon isotopic signature inherited from soil/epikarst processes may be modified by degassing and prior calcite precipitation (PCP) before its imprint on speleothem calcite. Despite laboratory demonstration of PCP effects on carbon isotopes and increasingly sophisticated models of the governing processes, to date, there has been limited effort to deconvolve the dual PCP and soil/epikarst components in measured speleothem isotopic time series. In this contribution, we explore the feasibility, advantages, and disadvantages of using trace element ratios and &delta;44Ca to remove the overprinting effect of PCP on measured &delta;13C to infer the temporal variations in the initial &delta;13C of dripwater. In 8 examined stalagmites, the most widely utilized PCP indicators Mg/Ca and &delta;44Ca covary as expected. However, Sr/Ca does not show consistent relationships with &delta;44Ca so PCP is not universally the dominant control on Sr/Ca. From &delta;44Ca and Mg/Ca, our calculation of PCP as fCa, fraction of initial Ca remaining at the deposition of the stalagmite layer, yields multiple viable solutions depending on the assumed &delta;44Ca fractionation factor and inferred variation in DMg. Uncertainty in the effective fractionation of &delta;13C during degassing and precipitation contributes to uncertainty in the absolute value of estimated initial &delta;13C. Nonetheless, the trends in initial &delta;13C are less sensitive to these uncertainties. In coeval stalagmites from the same cave spanning 94 to 82 ka interval, trends in calculated initial &delta;13C are more similar than those in measured &delta;13C, and reveal a common positive anomaly initial &delta;13C during a stadial cooling event. During deglaciations, the trend of greater respiration rates and higher soil CO2 is captured in the calculated initial &delta;13C, despite the tendency of higher interglacial dripwater situation to favor more extensive PCP.</p

Photosystem I light-harvesting proteins regulate photosynthetic electron transfer and hydrogen production

Linear electron flow (LEF) and cyclic electron flow (CEF) compete for light-driven electrons transferred from the acceptor side of photosystem I (PSI). Under anoxic conditions, such highly reducing electrons also could be used for hydrogen (H2) production via electron transfer between ferredoxin and hydrogenase in the green alga Chlamydomonas reinhardtii. Partitioning between LEF and CEF is regulated through PROTON-GRADIENT REGULATION5 (PGR5). There is evidence that partitioning of electrons also could be mediated via PSI remodeling processes. This plasticity is linked to the dynamics of PSI-associated light-harvesting proteins (LHCAs) LHCA2 and LHCA9. These two unique light-harvesting proteins are distinct from all other LHCAs because they are loosely bound at the PSAL pole. Here, we investigated photosynthetic electron transfer and H2 production in single, double, and triple mutants deficient in PGR5, LHCA2, and LHCA9. Our data indicate that lhca2 and lhca9 mutants are efficient in photosynthetic electron transfer, that LHCA2 impacts the pgr5 phenotype, and that pgr5/lhca2 is a potent H2 photo-producer. In addition, pgr5/lhca2 and pgr5/lhca9 mutants displayed substantially different H2 photo-production kinetics. This indicates that the absence of LHCA2 or LHCA9 impacts H2 photo-production independently, despite both being attached at the PSAL pole, pointing to distinct regulatory capacities

A Significant Population of Candidate New Members of the ρ Ophiuchi Cluster

We present a general method for identifying the pre-main-sequence population of any star-forming region, unbiased with respect to the presence or absence of disks, in contrast to samples selected primarily via their mid-infrared emission from Spitzer surveys. We have applied this technique to a new, deep, wide-field, near-infrared imaging survey of the ρ Ophiuchi cloud core to search for candidate low-mass members. In conjunction with published Spitzer IRAC photometry and least-squares fits of model spectra (COND, DUSTY, NextGen, and blackbody) to the observed spectral energy distributions, we have identified 948 candidate cloud members within our 90% completeness limits of J = 20.0, H = 20.0, and Ks = 18.50. This population represents a factor of ~3 increase in the number of known young stellar objects in the ρ Ophiuchi cloud. A large fraction of the candidate cluster members (81% ± 3%) exhibit infrared excess emission consistent with the presence of disks, thus strengthening the possibility of their being bona fide cloud members. Spectroscopic follow-up will confirm the nature of individual objects, better constrain their parameters, and allow an initial mass function to be derived

From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.)

<p>Abstract</p> <p>Background</p> <p>The improvement of agricultural crops with regard to yield, resistance and environmental adaptation is a perpetual challenge for both breeding and research. Exploration of the genetic potential and implementation of genome-based breeding strategies for efficient rye (<it>Secale cereale </it>L.) cultivar improvement have been hampered by the lack of genome sequence information. To overcome this limitation we sequenced the transcriptomes of five winter rye inbred lines using Roche/454 GS FLX technology.</p> <p>Results</p> <p>More than 2.5 million reads were assembled into 115,400 contigs representing a comprehensive rye expressed sequence tag (EST) resource. From sequence comparisons 5,234 single nucleotide polymorphisms (SNPs) were identified to develop the Rye5K high-throughput SNP genotyping array. Performance of the Rye5K SNP array was investigated by genotyping 59 rye inbred lines including the five lines used for sequencing, and five barley, three wheat, and two triticale accessions. A balanced distribution of allele frequencies ranging from 0.1 to 0.9 was observed. Residual heterozygosity of the rye inbred lines varied from 4.0 to 20.4% with higher average heterozygosity in the pollen compared to the seed parent pool.</p> <p>Conclusions</p> <p>The established sequence and molecular marker resources will improve and promote genetic and genomic research as well as genome-based breeding in rye.</p