A split horseradish peroxidase for detection of intercellular protein-protein interactions and sensitive visualization of synapses

Intercellular protein-protein interactions (PPIs) enable communication between cells in diverse biological processes, including cell proliferation, immune responses, infection and synaptic transmission, but they are challenging to visualize because existing techniques1,2,3 have insufficient sensitivity and/or specificity. Here we report split horseradish peroxidase (sHRP) as a sensitive and specific tool for detection of intercellular PPIs. The two sHRP fragments, engineered through screening of 17 cut sites in HRP followed by directed evolution, reconstitute into an active form when driven together by an intercellular PPI, producing bright fluorescence or contrast for electron microscopy. Fusing the sHRP fragments to the proteins neurexin (NRX) and neuroligin (NLG), which bind each other across the synaptic cleft4, enabled sensitive visualization of synapses between specific sets of neurons, including two classes of synapses in the mouse visual system. sHRP should be widely applicable for studying mechanisms of communication between a variety of cell types

Genetic Labeling of Synapses

A major challenge in neuroscience is to unravel how the synaptic contacts between neurons give rise to brain circuits. A number of techniques have been developed to visualize the synaptic organization of neurons. In this chapter, we focus on genetic methods to mark specific types of synapses so that synaptic sites can be visualized throughout the entire dendritic or axonal arbor of single neurons. Genetic synaptic labeling can be achieved by cell-type-specific viral or transgenic delivery of synaptic proteins tagged by fluorescent proteins. Sparse genetic labeling of neurons permits semiautomated quantification of the distribution and densities of selected types of synapses in segregated domains of the axonal and dendritic trees. These approaches can reduce the complexity and ambiguity of attributing synaptic sites to unravel principles of the synaptic organization of identified neuronal types in the circuit