158 research outputs found
Accessibility of the resources of near Earth space using multi-impulse transfers
Most future concepts for exploration and exploitation of space require a large initial mass in low Earth orbit. Delivering this mass requires overcoming Earth's natural gravity well, which imposes a distinct obstacle to space-faring. An alternative for future space progress is to search for resources in-situ among the near Earth asteroid population. This paper examines the scenario of future utilization of asteroid resources. The near Earth asteroid resources that could be transferred to a bound Earth orbit are determined by integrating the probability of finding asteroids inside the Keplerian orbital element space of the set of transfers with an specific energy smaller than a given threshold. Transfers are defined by a series of impulsive maneuvers and computed using the patched-conic approximation. The results show that even moderately low energy transfers enable access to a large mass of resources
A systematic search for anomaly-free supergravities in six dimensions
We conduct a systematic search for anomaly-free six-dimensional N=1 chiral
supergravity theories. Under a certain set of restrictions on the allowed gauge
groups and the representations of the hypermultiplets, we enumerate all
possible Poincare and gauged supergravities with one tensor multiplet
satisfying the 6D anomaly cancellation criteria.Comment: 39 pages, JHEP3 class, references added, minor typos correcte
A bound on 6D N=1 supergravities
We prove that there are only finitely many distinct semi-simple gauge groups
and matter representations possible in consistent 6D chiral (1,0) supergravity
theories with one tensor multiplet. The proof relies only on features of the
low-energy theory; the consistency conditions we impose are that anomalies
should be cancelled by the Green-Schwarz mechanism, and that the kinetic terms
for all fields should be positive in some region of moduli space. This result
does not apply to the case of the non-chiral (1,1) supergravities, which are
not constrained by anomaly cancellation.Comment: 23 pages, no figures; two paragraphs added to the proof in Appendix A
covering the SU(2) and SU(3) case, other minor correction
Study of heterogeneous nucleation of eutectic Si in high-purity Al-Si alloys with Sr addition
The official published version can be accessed from the link below - Copyright @ 2010 The Minerals, Metals & Materials Society and ASM InternationalAl-5 wt pct Si master-alloys with controlled Sr and/or P addition/s were produced using super purity Al 99.99 wt pct and Si 99.999 wt pct materials in an arc melter. The master-alloy was melt-spun resulting in the production of thin ribbons. The Al matrix of the ribbons contained entrained Al-Si eutectic droplets that were subsequently investigated. Differential scanning calorimetry, thermodynamic calculations, and transmission electron microscopy techniques were employed to examine the effect of the Sr and P additions on eutectic undercoolings and nucleation phenomenon. Results indicate that, unlike P, Sr does not promote nucleation. Increasing Sr additions depressed the eutectic nucleation temperature. This may be a result of the formation of a Sr phase that could consume or detrimentally affect potent AlP nucleation sites.This work is financially supported by the
Higher Education Commission of Pakistan and managerially supported from the OAD
The methylome of the hypothalamus of prepubertal and pubertal goats
Puberty is the fulfillment of fertility, a process involving physiological and morphological development.
It is well known that the increased hypothalamic secretion of the gonadotropin-releasing hormone
(GnRH) is essential for the activation of this process, even if the elements coordinating the timing of
puberty have not been fully identified1,2. Recent studies provide proof that there is an epigenetic
regulation of female puberty, and DNA methylation, the most studied epigenetic modification, plays a
major role in it3. We analyzed DNA methylation patterns of 5 Alpine goats at their prepubertal stage
and 5 that reached puberty in order to highlight differences in their methylome. Detection of
methylated regions across the goat genome involved a Methyl Binding Domain (MBD) enrichment
followed by deep sequencing (Hiseq2000 Illumina). The software ChIPseeqer4 permitted the
identification of peaks corresponding to hyper-methylated regions. We have observed a higher
methylation level in prepubertal goats. The distribution of the methylation peaks across the genome
and within CpG islands per chromosome per group of animals has been analyzed. Furthermore, we have
investigated differential methylation in genes associated with puberty. Specifically, Cbx7, coding for a
core component of the Polycomb group silencing complex, and GnRHR, the gene coding for GnRH
receptor, showed a higher number of peaks into two intragenic fragments within prepubertal goats.
These results, accompanied by transcriptome analysis, provide a foundation for elucidating the role of
DNA methylation in the complex mechanisms that drive puberty in goat species
Genome-wide analysis of DNA methylation in hypothalamus and ovary of Capra hircus
BACKGROUND:
DNA methylation is a frequently studied epigenetic modification due to its role in regulating gene expression and hence in biological processes and in determining phenotypic plasticity in organisms. Rudimentary DNA methylation patterns for some livestock species are publically available: among these, goat methylome deserves to be further explored.
RESULTS:
Genome-wide DNA methylation maps of the hypothalamus and ovary from Saanen goats were generated using Methyl-CpG binding domain protein sequencing (MBD-seq). Analysis of DNA methylation patterns indicate that the majority of methylation peaks found within genes are located gene body regions, for both organs. Analysis of the distribution of methylated sites per chromosome showed that chromosome X had the lowest number of methylation peaks. The X chromosome has one of the highest percentages of methylated CpG islands in both organs, and approximately 50% of the CpG islands in the goat epigenome are methylated in hypothalamus and ovary. Organ-specific Differentially Methylated Genes (DMGs) were correlated with the expression levels.
CONCLUSIONS:
The comparison between transcriptome and methylome in hypothalamus and ovary showed that a higher level of methylation is not accompanied by a higher gene suppression. The genome-wide DNA methylation map for two goat organs produced here is a valuable starting point for studying the involvement of epigenetic modifications in regulating goat reproduction performance
Menopause Is Associated with Immune Activation in Women with HIV
Background: Persistent immune activation due to gut barrier dysfunction is a suspected cause of morbidity in HIV, but the impact of menopause on this pathway is unknown. Methods: In 350 women with HIV from the Women's Interagency HIV Study, plasma biomarkers of gut barrier dysfunction (intestinal fatty acid binding protein; IFAB), innate immune activation (soluble CD14 and CD163; sCD14, sCD163), and systemic inflammation (interleukin-6 and tumor necrosis factor receptor 1; IL-6, TNFR1) were measured at 674 person-visits spanning ≤2 years. Results: Menopause (post-vs premenopausal status) was associated with higher plasma sCD14 and sCD163 in linear mixed-effects regression adjusting for age and other covariates (β=161.89 ng/mL; 95% confidence interval [CI], 18.37-305.41 and 65.48 ng/mL, 95% CI, 6.64-124.33, respectively); but not with plasma IFAB, IL-6, or TNFR1. In piece-wise linear mixed-effects regression of biomarkers on years before/after the final menstrual period, sCD14 increased during the menopausal transition by 250.71 ng/mL per year (95% CI, 16.63-484.79; P=.04), but not in premenopausal or postmenopausal periods. Conclusions: In women with HIV, menopause may increase innate immune activation, but data did not support an influence on the gut barrier or inflammation. Clinical implications of immune activation during menopausal transition warrant further investigation
Improving Genetic Prediction by Leveraging Genetic Correlations Among Human Diseases and Traits
Genomic prediction has the potential to contribute to precision medicine. However, to date, the utility of such predictors is limited due to low accuracy for most traits. Here theory and simulation study are used to demonstrate that widespread pleiotropy among phenotypes can be utilised to improve genomic risk prediction. We show how a genetic predictor can be created as a weighted index that combines published genome-wide association study (GWAS) summary statistics across many different traits. We apply this framework to predict risk of schizophrenia and bipolar disorder in the Psychiatric Genomics consortium data, finding substantial heterogeneity in prediction accuracy increases across cohorts. For six additional phenotypes in the UK Biobank data, we find increases in prediction accuracy ranging from 0.7 for height to 47 for type 2 diabetes, when using a multi-trait predictor that combines published summary statistics from multiple traits, as compared to a predictor based only on one trait. © 2018 The Author(s)
Genome-wide association study identifies 30 Loci Associated with Bipolar Disorder
This paper is dedicated to the memory of Psychiatric Genomics Consortium (PGC) founding member and Bipolar disorder working group co-chair Pamela Sklar. We thank the participants who donated their time, experiences and DNA to this research, and to the clinical and scientific teams that worked with them. We are deeply indebted to the investigators who comprise the PGC. The views expressed are those of the authors and not necessarily those of any funding or regulatory body. Analyses were carried out on the NL Genetic Cluster Computer (http://www.geneticcluster.org ) hosted by SURFsara, and the Mount Sinai high performance computing cluster (http://hpc.mssm.edu).Bipolar disorder is a highly heritable psychiatric disorder. We performed a genome-wide association study including 20,352 cases and 31,358 controls of European descent, with follow-up analysis of 822 variants with P<1x10-4 in an additional 9,412 cases and 137,760 controls. Eight of the 19 variants that were genome-wide significant (GWS, p < 5x10-8) in the discovery GWAS were not GWS in the combined analysis, consistent with small effect sizes and limited power but also with genetic heterogeneity. In the combined analysis 30 loci were GWS including 20 novel loci. The significant loci contain genes encoding ion channels, neurotransmitter transporters and synaptic components. Pathway analysis revealed nine significantly enriched gene-sets including regulation of insulin secretion and endocannabinoid signaling. BDI is strongly genetically correlated with schizophrenia, driven by psychosis, whereas BDII is more strongly correlated with major depressive disorder. These findings address key clinical questions and provide potential new biological mechanisms for BD.This work was funded in part by the Brain and Behavior Research Foundation, Stanley Medical Research Institute, University of Michigan, Pritzker Neuropsychiatric Disorders Research Fund L.L.C., Marriot Foundation and the Mayo Clinic Center for Individualized Medicine, the NIMH Intramural Research Program; Canadian Institutes of Health Research; the UK Maudsley NHS Foundation Trust, NIHR, NRS, MRC, Wellcome Trust; European Research Council; German Ministry for Education and Research, German Research Foundation IZKF of Münster, Deutsche Forschungsgemeinschaft, ImmunoSensation, the Dr. Lisa-Oehler Foundation, University of Bonn; the Swiss National Science Foundation; French Foundation FondaMental and ANR; Spanish Ministerio de EconomÃa, CIBERSAM, Industria y Competitividad, European Regional Development Fund (ERDF), Generalitat de Catalunya, EU Horizon 2020 Research and Innovation Programme; BBMRI-NL; South-East Norway Regional Health Authority and Mrs. Throne-Holst; Swedish Research Council, Stockholm County Council, Söderström Foundation; Lundbeck Foundation, Aarhus University; Australia NHMRC, NSW Ministry of Health, Janette M O'Neil and Betty C Lynch
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