An Evaluation of Image Velocimetry Techniques under Low Flow Conditions and High Seeding Densities Using Unmanned Aerial Systems

Image velocimetry has proven to be a promising technique for monitoring river flows using remotely operated platforms such as Unmanned Aerial Systems (UAS). However, the application of various image velocimetry algorithms has not been extensively assessed. Therefore, a sensitivity analysis has been conducted on five different image velocimetry algorithms including Large Scale Particle Image Velocimetry (LSPIV), Large-Scale Particle Tracking Velocimetry (LSPTV), Kanade−Lucas Tomasi Image Velocimetry (KLT-IV or KLT), Optical Tracking Velocimetry (OTV) and Surface Structure Image Velocimetry (SSIV), during low river flow conditions (average surface velocities of 0.12−0.14 m s - 1 , Q60) on the River Kolubara, Central Serbia. A DJI Phantom 4 Pro UAS was used to collect two 30-second videos of the surface flow. Artificial seeding material was distributed homogeneously across the rivers surface, to enhance the conditions for image velocimetry techniques. The sensitivity analysis was performed on comparable parameters between the different algorithms, including the particle identification area parameters (such as Interrogation Area (LSPIV, LSPTV and SSIV), Block Size (KLT-IV) and Trajectory Length (OTV)) and the feature extraction rate. Results highlighted that KLT and SSIV were sensitive to changing the feature extraction rate; however, changing the particle identification area did not affect the surface velocity results significantly. OTV and LSPTV, on the other hand, highlighted that changing the particle identification area presented higher variability in the results, while changing the feature extraction rate did not affect the surface velocity outputs. LSPIV proved to be sensitive to changing both the feature extraction rate and the particle identification area. This analysis has led to the conclusions that for surface velocities of approximately 0.12 m s - 1 image velocimetry techniques can provide results comparable to traditional techniques such as ADCPs. However, LSPIV, LSPTV and OTV require additional effort for calibration and selecting the appropriate parameters when compared to KLT-IV and SSIV. Despite the varying levels of sensitivity of each algorithm to changing parameters, all configuration image velocimetry algorithms provided results that were within 0.05 m s - 1 of the ADCP measurements, on average

Decision making under uncertainty in environmental projects using mathematical simulation modeling

The final publication is available at Springer via http://dx.doi.org/10.1007/s12665-016-6135-yIn decision-making processes, reliability and risk aversion play a decisive role. The aim of this study is to perform an uncertainty assessment of the effects of future scenarios of sustainable groundwater pumping strategies on the quantitative and chemical status of an aquifer. The good status of the aquifer is defined according to the terms established by the EU Water Framework Directive (WFD). A decision support systems (DSS) is presented, which makes use of a stochastic inverse model (GC method) and geostatistical approaches to calibrate equally likely realizations of hydraulic conductivity (K) fields for a particular case study. These K fields are conditional to available field data, including hard and soft information. Then, different future scenarios of groundwater pumping strategies are generated, based on historical information and WFD standards, and simulated for each one of the equally likely K fields. The future scenarios lead to different environmental impacts and levels of socioeconomic development of the region and, hence, to a different degree of acceptance among stakeholders. We have identified the different stakeholders implied in the decision-making process, the objectives pursued and the alternative actions that should be considered by stakeholders in a public participation project (PPP). The MonteCarlo simulation provides a highly effective way for uncertainty assessment and allows presenting the results in a simple and understandable way even for non-experts stakeholders. The methodology has been successfully applied to a real case study and lays the foundations to performa PPP and stakeholders' involvement in a decisionmaking process as required by the WFD. The results of the methodology can help the decision-making process to come up with the best policies and regulations for a groundwater system under uncertainty in groundwater parameters and management strategies and involving stakeholders with conflicting interests.Llopis Albert, C.; Palacios Marqués, D.; Merigó -Lindahl, JM. (2016). Decision making under uncertainty in environmental projects using mathematical simulation modeling. Environmental Earth Sciences. 75(19):1-11. doi:10.1007/s12665-016-6135-yS1117519Arhonditsis GB, Perhar G, Zhang W, Massos E, Shi M, Das A (2008) Addressing equifinality and uncertainty in eutrophication models. Water Resour Res 44:W01420. doi: 10.1029/2007WR005862Capilla JE, Llopis-Albert C (2009) Gradual conditioning of non-gaussian transmissivity fields to flow and mass transport data. 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Comput Geosci 16(4):395–440Harbaugh AW, Banta ER, Hill MC and McDonald MG (2000) MODFLOW- 2000, The US geological survey modular groundwater model-user guide to modularization concepts and the groundwater flow process. US Geol. Surv. Open-File Rep 00–92, 12Hu LY (2000) Gradual deformation and iterative calibration of Gaussian related stochastic models. Math Geol 32(1):87–108Jagelke J, Barthel R (2005) Conceptualization and implementation of a regional groundwater model for the Neckar catchment in the framework of an integrated regional model. Adv Geosci 5:105–111Llopis-Albert C (2008) Stochastic inverse modeling conditional to flow, mass transport and secondary information. Universitat Politècnica de València, València. ISBN 978-84-691-9796-7Llopis-Albert C, Capilla JE (2009a) Gradual conditioning of non-gaussian transmissivity fields to flow and mass transport data. Demonstration on a synthetic aquifer. J Hydrol 371:53–55. doi: 10.1016/j.jhydrol.2009.03.014Llopis-Albert C, Capilla JE (2009b) Gradual conditioning of non-gaussian transmissivity fields to flow and mass transport data. Application to the macrodispersion experiment (MADE-2) site, on Columbus air force base in Mississippi (USA). J Hydrol 371:75–84. doi: 10.1016/j.jhydrol.2009.03.016Llopis-Albert C, Capilla JE (2010a) Stochastic simulation of non-gaussian 3D conductivity fields in a fractured medium with multiple statistical populations: a case study. J Hydrol Eng 15(7):554–566. doi: 10.1061/(ASCE)HE.1943-5584.0000214Llopis-Albert C, Capilla JE (2010b) Stochastic inverse modeling of hydraulic conductivity fields taking into account independent stochastic structures: a 3D case study. J Hydrol 391:277–288. doi: 10.1016/j.jhydrol.2010.07.028Llopis-Albert C, Pulido-Velazquez D (2014) Discussion about the validity of sharp-interface models to deal with seawater intrusion in coastal aquifers. Hydrol Process 28(10):3642–3654Llopis-Albert C, Pulido-Velazquez D (2015) Using MODFLOW code to approach transient hydraulic head with a sharp-interface solution. Hydrol Process 29(8):2052–2064. doi: 10.1002/hyp.10354Llopis-Albert C, Palacios-Marqués D, Merigó JM (2014) A coupled stochastic inverse-management framework for dealing with nonpoint agriculture pollution under groundwater parameter uncertainty. J Hydrol 511:10–16. doi: 10.1016/j.jhydrol.2014.01.021Llopis-Albert C, Merigó JM, Palacios-Marqués D (2015) Structure adaptation in stochastic inverse methods for integrating information. Water Resour Manage 29(1):95–107. doi: 10.1007/s11269-014-0829-2Llopis-Albert C, Merigó JM, Xu Y (2016) A coupled stochastic inverse/sharp interface seawater intrusion approach for coastal aquifers under groundwater parameter uncertainty. J Hydrol 540:774–783. doi: 10.1016/j.jhydrol.2016.06.065McDonald MG and Harbaugh AW (1988) A modular three-dimensional finite-difference groundwater flow model. 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Index-Based Cost-Effectiveness Analysis vs. Least-Cost River Basin Optimization Model: Comparison in the Selection of a Programme of Measures at the River Basin Scale

Increasing water scarcity challenges conventional approaches to managing water resources. More holistic tools and methods are required to support the integrated planning and management of fresh water resources at the river basin level. This paper compares an index-based cost-effectiveness analysis (IBCEA) with a least-cost river basin optimization model (LCRBOM). Both methods are applied to a real case study to design a cost-effective portfolio of water demand and supply management measures that ensures compliance with water supply and environmental targets. The IBCEA is a common approach to select programmes of measures in the implementation of the EU Water Framework Directive. We describe its limitations in finding a least-cost solution at the river basin level and highlight the benefits from implementing a LCRBOM. Both methods are compared in a real case study, the Orb river basin, in the south of France. The performances of the programmes of measures selected by the two methods are compared for the same annual equivalent cost. By ignoring the spatial and temporal variability of water availability and water demands in the river basin and the interconnection among its elements, the aggregated approach used in the standard IBCEA can miss more cost-effective solutions at the river basin scale.This paper is based on work conducted as part of several projects over more than 6 years. It benefited from the financial and technical support of the Agence de l'Eau Rhone Mediteranee et Corse; Conseil General de l'Herault; Conseil Regional du Languedoc Roussillon et ONEMA. Funding was partly provided by the IMPADAPT project /CGL2013-48424-C2-1-R) from the Spanish ministry MINECO (Ministerio de Economia y Competitividad) and European FEDER funds. Corentin Girard is supported by a grant from the University Lecturer Training Programme (FPU12/03803) of the Ministry of Education, Culture and Sports of Spain. We are very grateful to Y. Caballero (BRGM), S. Chazot (BRLi), E. Vier and F. Aigoui (GINGERGROUP) and L. Rippert and his team from the SMVOL for their help during the project and for the data provided. We thank as well the two anonymous reviewers, the Associated Editor and Editor-in-Chief of Water Resources Management, for their useful and encouraging comments during the review process.Girard-Martin, CDP.; Rinaudo, J.; Pulido-Velazquez, M. (2015). Index-Based Cost-Effectiveness Analysis vs. Least-Cost River Basin Optimization Model: Comparison in the Selection of a Programme of Measures at the River Basin Scale. 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Transition pathways to sustainable agricultural water management: A review of integrated modeling approaches

Agricultural water management (AWM) is an interdisciplinary concern, cutting across traditional domains such as agronomy, climatology, geology, economics, and sociology. Each of these disciplines has developed numerous process-based and empirical models for AWM. However, models that simulate all major hydrologic, water quality, and crop growth processes in agricultural systems are still lacking. As computers become more powerful, more researchers are choosing to integrate existing models to account for these major processes rather than building new cross-disciplinary models. Model integration carries the hope that, as in a real system, the sum of the model will be greater than the parts. However, models based upon simplified and unrealistic assumptions of physical or empirical processes can generate misleading results which are not useful for informing policy. In this article, we use literature and case studies from the High Plains Aquifer and Southeastern United States regions to elucidate the challenges and opportunities associated with integrated modeling for AWM and recommend conditions in which to use integrated models. Additionally, we examine the potential contributions of integrated modeling to AWM - the actual practice of conserving water while maximizing productivity. Editor's note: This paper is part of the featured series on Optimizing Ogallala Aquifer Water Use to Sustain Food Systems. See the February 2019 issue for the introduction and background to the series.Peer reviewedPlant and Soil Science

New isolated planetary mass objects and the stellar and substellar mass function of the sigma Orionis cluster

We report on our analysis of the VISTA Orion ZYJHKs photometric data (completeness magnitudes Z=22.6 and J=21.0mag) focusing on a circular area of 2798.4 arcmin^2 around the young sigma Orionis star cluster (~3Myr, ~352pc, solar metallicity). The combination of the VISTA photometry with optical, WISE and Spitzer data allows us to identify a total of 210 cluster member candidates with masses in the interval 0.25-0.004Msun, 23 of which are new planetary-mass object findings. These discoveries double the number of cluster planetary-mass candidates known so far. One object has colors compatible with a T spectral type. The cluster harbors about as many brown dwarfs (69, 0.072-0.012Msun) and planetary-mass objects (37, 0.012-0.004Msun) as very low-mass stars (104, 0.25-0.072Msun). Based on Spitzer data, we derive a disk frequency of ~40% for very low-mass stars, brown dwarfs, and planetary mass objects in sigma Orionis. The radial density distributions of these three mass intervals are alike: all are spatially concentrated within an effective radius of 12arcmin (1.2pc) around the multiple star sigma Ori, and no obvious segregation between disk-bearing and diskless objects is observed. Using the VISTA data and the Mayrit catalog, we derive the cluster mass spectrum (DeltaN/DeltaM ~ M^{-alpha}) from ~19 to 0.006Msun (VISTA ZJ completeness), which is reasonably described by two power-law expressions with indices of alpha=1.7+/-0.2 for M>0.35Msun, and alpha=0.6+/-0.2 for M<0.35Msun. The sigma Orionis mass spectrum smoothly extends into the planetary-mass regime down to 0.004Msun. Our findings of T-type sources (<0.004Msun) in the VISTA sigma Orionis exploration appear to be smaller than what is predicted by the extrapolation of the cluster mass spectrum down to the survey J-band completeness.Comment: Accepted for publication in ApJ. 69 pages, 15 figure

Identification and characterization of Rhipicephalus (Boophilus) microplus candidate protective antigens for the control of cattle tick infestations

The cattle ticks, Rhipicephalus (Boophilus) spp., affect cattle production in tropical and subtropical regions of the world. Tick vaccines constitute a cost-effective and environmentally friendly alternative to tick control. The recombinant Rhipicephalus microplus Bm86 antigen has been shown to protect cattle against tick infestations. However, variable efficacy of Bm86-based vaccines against geographic tick strains has encouraged the research for additional tick-protective antigens. Herein, we describe the analysis of R. microplus glutathione-S transferase, ubiquitin (UBQ), selenoprotein W, elongation factor-1 alpha, and subolesin (SUB) complementary DNAs (cDNAs) by RNA interference (RNAi) in R. microplus and Rhipicephalus annulatus. Candidate protective antigens were selected for vaccination experiments based on the effect of gene knockdown on tick mortality, feeding, and fertility. Two cDNA clones encoding for UBQ and SUB were used for cattle vaccination and infestation with R. microplus and R. annulatus. Control groups were immunized with recombinant Bm86 or adjuvant/saline. The highest vaccine efficacy for the control of tick infestations was obtained for Bm86. Although with low immunogenic response, the results with the SUB vaccine encourage further investigations on the use of recombinant subolesin alone or in combination with other antigens for the control of cattle tick infestations. The UBQ peptide showed low immunogenicity, and the results of the vaccination trial were inconclusive to assess the protective efficacy of this antigen. These experiments showed that RNAi could be used for the selection of candidate tick-protective antigens. However, vaccination trials are necessary to evaluate the effect of recombinant antigens in the control of tick infestations, a process that requires efficient recombinant protein production and formulation systems

Potassium and Sodium Transport in Yeast

[EN] As the proper maintenance of intracellular potassium and sodium concentrations is vital for cell growth, all living organisms have developed a cohort of strategies to maintain proper monovalent cation homeostasis. In the model yeast Saccharomyces cerevisiae, potassium is accumulated to relatively high concentrations and is required for many aspects of cellular function, whereas high intracellular sodium/potassium ratios are detrimental to cell growth and survival. The fact that S. cerevisiae cells can grow in the presence of a broad range of concentrations of external potassium (10 M–2.5 M) and sodium (up to 1.5 M) indicates the existence of robust mechanisms that have evolved to maintain intracellular concentrations of these cations within appropriate limits. In this review, current knowledge regarding potassium and sodium transporters and their regulation will be summarized. 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CIBERER : Spanish national network for research on rare diseases: A highly productive collaborative initiative

Altres ajuts: Instituto de Salud Carlos III (ISCIII); Ministerio de Ciencia e Innovación.CIBER (Center for Biomedical Network Research; Centro de Investigación Biomédica En Red) is a public national consortium created in 2006 under the umbrella of the Spanish National Institute of Health Carlos III (ISCIII). This innovative research structure comprises 11 different specific areas dedicated to the main public health priorities in the National Health System. CIBERER, the thematic area of CIBER focused on rare diseases (RDs) currently consists of 75 research groups belonging to universities, research centers, and hospitals of the entire country. CIBERER's mission is to be a center prioritizing and favoring collaboration and cooperation between biomedical and clinical research groups, with special emphasis on the aspects of genetic, molecular, biochemical, and cellular research of RDs. This research is the basis for providing new tools for the diagnosis and therapy of low-prevalence diseases, in line with the International Rare Diseases Research Consortium (IRDiRC) objectives, thus favoring translational research between the scientific environment of the laboratory and the clinical setting of health centers. In this article, we intend to review CIBERER's 15-year journey and summarize the main results obtained in terms of internationalization, scientific production, contributions toward the discovery of new therapies and novel genes associated to diseases, cooperation with patients' associations and many other topics related to RD research