Reconstitution of Nup157 and Nup145N into the Nup84 Complex

About 30 different nucleoporins (Nups) constitute the nuclear pore complex. We have affinity-purified 28 of these nuclear pore proteins and identified new nucleoporin interactions by this analysis. We found that Nup157 and Nup170, two members of the large structural Nups, and the Gly-Leu-Phe-Gly nucleoporin Nup145N specifically co-purified with members of the Nup84 complex. In addition, Nup145N co-enriched during Nup157 purification. By in vitro reconstitution, we demonstrate that Nup157 and Nup145N form a nucleoporin subcomplex. Moreover, we show that Nup157 and Nup145N bind to the heptameric Nup84 complex. This assembly thus represents approximately one-third of all nucleoporins. To characterize Nup157 structurally, we purified and analyzed it by electron microscopy. Nup157 is a hollow sphere that resembles a clamp or a gripping hand. Thus, we could reconstitute an interaction between a large structural Nup, an FG repeat Nup, and a major structural module of the nuclear pore complex

Anisotropic 'hairs' in string cosmology

In this letter we investigate whether the isotropy problem is naturally solved in inflationary cosmologies inspired by string theory, so called pre-big-bang cosmologies. We find that, in contrast to what happens in the more common 'potential inflation' models, initial anisotropies do not decay during pre-big-bang inflation.Comment: 4 pages, 1 figur

Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration

The ‘birth’ of the eukaryotic ribosome is preceded by RNA folding and processing reactions that depend on assembly factors and snoRNAs. The 90S (SSU-processome) is the earliest pre-ribosome structurally analyzed, which was suggested to assemble stepwise along the growing pre-rRNA from 5’>3’, but this directionality may not be accurate. Here, by analyzing the structure of series of novel 90S assembly intermediates isolated from Chaetomium thermophilum, we discover a reverse order of 18S rRNA subdomain incorporation. This revealed that large parts of the 18S rRNA 3’ and central domains assemble first into the 90S, before the 5’ domain is stably integrated. This final incorporation depends on a physical contact between a heterotrimer Enp2-Bfr2-Lcp1 recruited to the flexible 5’ domain and Kre33, which reconstitutes the Kre33-Enp-Brf2-Lcp5 module on the compacted 90S pre-ribosome. Keeping the 5’ domain temporarily segregated from the 90S scaffold could provide an extra time to complete the multifaceted 5’ domain folding, which depends on a distinct set of snoRNAs and processing factors

Adiabatic perturbations in pre big bang models: matching conditions and scale invariance

At low energy, the four-dimensional effective action of the ekpyrotic model of the universe is equivalent to a slightly modified version of the pre big bang model. We discuss cosmological perturbations in these models. In particular we address the issue of matching the perturbations from a collapsing to an expanding phase in full generality. We show that, generically, one obtains $n=0$ for the spectrum of scalar perturbations in the original pre big model (with vanishing potential). When an exponential potential for the dilaton is included, a scale invariant spectrum ($n=1$) of adiabatic scalar perturbations is produced under very generic matching conditions, both in a modified pre big bang and ekpyrotic scenario. We also derive general results valid for power law scale factors matched to a radiation dominated era.Comment: 11 pages, 1 figure, revised version with small corrections to match version in print. Results and conclusions unchange

Probing the nucleoporin FG repeat network defines structural and functional features of the nuclear pore complex

A new tool to probe the FG repeat network of the nuclear pore complex transport channel in vivo provides insight into the organization and functional features of the channel