22 research outputs found

    Joint reconstruction of activity and attenuation in dynamic PET

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    Joint reconstruction of attenuation and emission in positron emission tomography (PET) using the maximum likelihood activity and attenuation estimation (MLAA) algorithm was proposed in the past. However, cross-talk between the activity and attenuation estimation limits the usefulness of MLAA for PET data without time-of-flight (TOF) information. This work introduces dynamic MLAA (dMLAA), an extension of the MLAA algorithm for dynamic data, to jointly reconstruct the activity distributions and a single attenuation map. The hypothesis is that using information from multiple dynamic emission frames may improve the estimated attenuation map compared to using static PET data. Preliminary results using dMLAA algorithm showed that use of multiple dynamic emission frames slightly improves the reconstructed attenuation map (especially in bones, cavities and lesion area) compared to using a single emission frame. However, without TOF, the reconstructed map still suffers from ill-posedness of the problem despite the additional dynamic information. The reconstruction may be improved for tracers that present a higher inter- and intra-dynamic frame contrast and edge variability

    Motion-corrected reconstruction of parametric images from dynamic PET data with the Synergistic Image Reconstruction Framework (SIRF)

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    Motion correction has been added to a PET-MR reconstruction tool, SIRF, by incorporating a registration package, NiftyReg. New functionality has been demonstrated in the context of estimating kinetic parameters in the left temporal lobe, comparing direct and indirect reconstructions and evaluating the impact of using motion correction.Principal component analysis was used to detect motion and to determine time frames, while STIR's parametric-OSEM was used to perform the motion-corrected direct parametric reconstruction.It was found that the variance in the left temporal lobe decreased when motion correction was performed, and the same was true of direct reconstructions compared to indirect.With SIRF, the entirety of the demonstrated functionality can be performed from a single Matlab or Python script

    Joint Activity/Attenuation Reconstruction in SPECT Using Photopeak and Scatter Sinograms

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    This work presents a joint activity/attenuation reconstruction method in SPECT, based on the maximisation of the scatter and non-scatter data joint log-likelihood. The activity image is updated with standard expectation maximisation (EM) whereas the attenuation is updated with a quasi-Newton line-search. Results on simulation demonstrates that the utilisation of scatter considerably reduces the ill-posedness of the initial reconstruction problem with non-scatter counts only. Results on phantom data show that using scatter enables myocardial reconstruction similar to an EM reconstruction with CT attenuation correctio

    Simulation of spiculated breast lesions

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    Virtual clinical trials are a promising new approach increasingly used for the evaluation and comparison of breast imaging modalities. A key component in such an assessment paradigm is the use of simulated pathology, in particular, simulation of lesions. Breast mass lesions can be generally classified into two categories based on their appearance; nonspiculated masses and spiculated masses. In our previous work, we have successfully simulated non-spiculated masses using a fractal growth process known as diffusion limited aggregation. In this new work, we have extended the DLA model to simulate spiculated lesions by using features extracted from patient DBT images containing spiculated lesions. The features extracted included spicule length, width, curvature and distribution. This information was used to simulate realistic looking spicules which were attached to the surface of a DLA mass to produce a spiculated mass. A batch of simulated spiculated masses was inserted into normal patient images and presented to an experienced radiologist for review. The study yielded promising results with the radiologist rating 60% of simulated lesions in 2D and 50% of simulated lesions in DBT as realistic

    OPTIMAM Image Simulation Toolbox - Recent Developments and Ongoing Studies

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    Virtual clinical trials (VCTs) are increasingly being seen as a viable pre-clinical method for evaluation of imaging systems in breast cancer screening. The CR-UK funded OPTIMAM project is aimed at producing modelling tools for use in such VCTs. In the initial phase of the project, modelling tools were produced to simulate 2D-mammography and digital breast tomosynthesis (DBT) imaging systems. This paper elaborates on the new tools that have recently been developed for the current phase of the OPTIMAM project. These new additions to the framework include tools for simulating synthetic breast tissue, spiculated masses and variable-angle DBT systems. These tools are described in the paper along with the preliminary validation results. Four-alternative forced choice (4-AFC) type studies deploying these new tools are underway. The results of the ongoing 4AFC studies investigating minimum detectable contrast/size of masses/microcalcifications for different modalities and system designs are presented

    Simulation and assessment of realistic breast lesions using fractal growth models.

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    A new method of generating realistic three dimensional simulated breast lesions known as diffusion limited aggregation (DLA) is presented, and compared with the random walk (RW) method. Both methods of lesion simulation utilize a physics-based method for inserting these simulated lesions into 2D clinical mammogram images that takes into account the polychromatic x-ray spectrum, local glandularity and scatter. DLA and RW masses were assessed for realism via a receiver operating characteristic (ROC) study with nine observers. The study comprised 150 images of which 50 were real pathology proven mammograms, 50 were normal mammograms with RW inserted masses and 50 were normal mammograms with DLA inserted masses. The average area under the ROC curve for the DLA method was 0.55 (95% confidence interval 0.51-0.59) compared to 0.60 (95% confidence interval 0.56-0.63) for the RW method. The observer study results suggest that the DLA method produced more realistic masses with more variability in shape compared to the RW method. DLA generated lesions can overcome the lack of complexity in structure and shape in many current methods of mass simulation

    Development and validation of a modelling framework for simulating 2D-mammography and breast tomosynthesis images.

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    Planar 2D x-ray mammography is generally accepted as the preferred screening technique used for breast cancer detection. Recently, digital breast tomosynthesis (DBT) has been introduced to overcome some of the inherent limitations of conventional planar imaging, and future technological enhancements are expected to result in the introduction of further innovative modalities. However, it is crucial to understand the impact of any new imaging technology or methodology on cancer detection rates and patient recall. Any such assessment conventionally requires large scale clinical trials demanding significant investment in time and resources. The concept of virtual clinical trials and virtual performance assessment may offer a viable alternative to this approach. However, virtual approaches require a collection of specialized modelling tools which can be used to emulate the image acquisition process and simulate images of a quality indistinguishable from their real clinical counterparts. In this paper, we present two image simulation chains constructed using modelling tools that can be used for the evaluation of 2D-mammography and DBT systems. We validate both approaches by comparing simulated images with real images acquired using the system being simulated. A comparison of the contrast-to-noise ratios and image blurring for real and simulated images of test objects shows good agreement (聽<聽9% error). This suggests that our simulation approach is a promising alternative to conventional physical performance assessment followed by large scale clinical trials

    Nuevos elementos de la historia universal, sagrada y profana de la esphera y geographia con un breve compendio de la historia de Espa帽a y Francia

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