Comparison of transgenic plant production for bacterial blight resistance in Pakistani local rice (Oryza sativa L.) cultivars

The study was carried out to improve bacterial leaf blight resistance in three rice cultivars (Basmati - 370, DR - 82 and IR - 6) by Agrobacterium mediated transformation system. Three week-old scutellum derived calli were infected with Agrobacterium strain EHA101, containing binary vector pTCL5 which has Xa 21 gene. Different levels of acetosyringone were tested to enhance transformation efficiency. Acetosyringone at 300 ìM showed 56.6% GUS expression with 100 and 200 ìM acetosyringone showing 13.3 and 30.0% GUS expression, respectively. Maximum transformation efficiency was obtained using DR - 82 with calli exposed to 300 ìM acetosyringone for 2 min. Direct hygromycin selection with 48 h ofco-cultivation was superior to pre-selection in all three cultivars. Transient GUS expression was 51.4% while stable GUS expression in calli was 18.8%. PCR analysis confirmed the presence of the Xa 21 gene in transformed regenerated plants. Stable varietal transformation efficiency was DR - 82 > Basmati-370 > IR - 6. Resistance of transgenic plants against Xanthomonas oryzae pathovar oryzae was evaluated with various strains/isolates at the seedling stage. All PCR positive transgenic plants of DR - 82 and Basmati - 370 were resistant with lesion areas less than 5% of the inoculated leaf area. The tested transgenic plants were resistant to all the indigenous and exotic strains tested due to the broad spectrum protection provided by the Xa 21 gene

Second look PCNL for residual renal calculi: experience in Hospital Universiti Kebangsaan Malaysia

BACKGROUND Presence of residual calculi post PCNL is not rare. Due to the presence of residual calculi, patientm ight be subjectedt o a repeatP CNL under generala naesthesiaw hich is not without the risk of increased morbidity. Second look PCNL might reduce the chanceo f a repeatP CNL and subsequentlyre ducet he risk of morbidityto the patient. AIM To audit retrospectivelyt he outcomeo f secondl ook PCNL in our centerf rom January 2003 to October 2005. MATERIALAND METHOD 33 patients underwent second look PCNL for residual stone in our center from January 2003 to October 2005.The records of each patient were traced and the data analysed. The stone clearance. tolerability of procedure, complications and operation time were the variables and outcome studied. RESULT Out of 33 patients, 4 achieved complete clearance, 8 almost complete clearance, and 13 partial clearancew hile only 4 patientsh ad unsuccessfusl econdl ook operation due to technical difficulties. In another 4 patients, the KUB x-rays were doubtful and second look operation confirmed the absence of stone in the pelvicalyceal system. There were no complications and the procedure well tolerated by all the patients. CONCLUSION Due to its advantagesa nd low morbidity, secondl ook PCNL shouldb e an alternative method of treatment for residual stones whenever indicated

A Review of Different Applications of Wireless Sensor Network (WSN) in Monitoring Rehabilitation

Parkinson’s disease is a neurodegenerative brain disorder that affects movement. The lack of dopamine in the brain cells causes patients have lesser ability to regulate movement and emotions as time goes on. There is no cure for this disease. Although drug therapies are successful for some patients, most of the patients usually develop motor complications. In this paper, we presented our work towards the comparison of several wireless sensor network (WSN) systems for monitoring Parkinson’s patients. The designs of each system are explored. The parts being considered to design a wireless sensor network and limitations are discussed. These findings helped us to suggest a possible wireless sensor network system to supervise Parkinson’s diseases patients for a more extended period of time

Genetic diversity analysis in the Hypericum perforatum populations in the Kashmir valley by using inter-simple sequence repeats (ISSR) markers

Assessment of genetic variability among the Hypericum perforatum populations is critical to the development of effective conservation  strategies in the Kashmir valley. To obtain accurate estimates of genetic diversity among and within populations of H. perforatum, inter-simple sequence repeats (ISSR) markers were used. The study was aimed to check, whether ISSR fingerprinting may be a useful tool for studying genetic variations among H. perforatum populations in the Kashmir valley (India). A total of 15 ISSR primers were tested with the 20 genotypes of H. perforatum. The ten informative primers were selected and used to evaluate the degree of polymorphism and genetic relationships within and among all the H. perforatum populations. ISSR of 20 genotypes analysis yielded 98 fragments that could be scored, of which 71 were polymorphic, with an average of 7.1 polymorphic fragments per primer. Number of amplified fragments varied in size from 150 to 1650 bp. Percentage of polymorphism ranged from 60% to a maximum of 100%. Resolving power ranged from a minimum of 7.7 to a maximum of 14.3. Shannon indexes ranges from 0.166 to 0.389 with an average of 0.198 and Nei’s genetic diversity (h) ranges from 6.98 to 9.8. Estimated value of gene flow (Nm = 0.579) indicated that there was limited gene flow among the populations. The genetic diversity (Ht) within the population of 0.245 was clearly higher than that of among population genetic diversity (Hs= 0.115), indicating an out-crossing predominance in the studied populations. Analysis of molecular variance by ISSR markers indicated that over half of the total variation in the studied populations (58%) could be accounted for by differences among the 8 divisions, with a further 42% being accounted for by the variation among populations within a division.The dendrogram grouping the populations by unweighted pair-group method with arithmeticaverages (UPGMA) method revealed eight main clusters. In conclusion, combined analysis of ISSR markers and hypericin content is an optimal approach for further progress and breeding programs.Keywords: Hypericum perforatum (St. John's Wort), inter-simple sequence repeats (ISSR) markers, unweighted pair-group method with arithmetic averages (UPGMA), Nei’s genetic diversityAfrican Journal of Biotechnology, Vol. 13(1), pp. 18-31, 1 January, 201

Flavonoid, pterocarpans and steroid from Erythrina fusca Lour. growing in Bangladesh: isolation, and antimicrobial and free-radical scavenging activity

Background: Erythrina fusca Lour. (fam. Fabaceae) is a flowering tree, found extensively in tropical and subtropical Asian countries, and is known for its use in traditional medicine for the treatment of various human ailments, for example, fever, liver complications, infections, and headaches. Objective: To carry out phytochemical study, and antimicrobial and free-radical scavenging activity evaluation of E. fusca. Methods: Ground stem bark of this plant was extracted by maceration with methanol, partitioned with various organic solvents, and compounds were isolated by chromatographic means. Structures of isolated compounds were confirmed by spectroscopic analyses. The antibacterial activity was assessed by the disc diffusion method, and the free-radical scavenging activity was determined by DPPH assay. Results: The carbon tetrachloride soluble fraction of the methanol extract of E. fusca afforded shinpterocarpin (1), lupinifolin (2), 3,9-dihydroxy-4-(3,3-dimethylallyl) [6aR,11aR]-pterocarpan (3) and β-sitosterol (4). Compounds 1-3 showed considerable antimicrobial activity against five Gram-positive and eight Gram–negative bacterial and three fungal strains tested in this study. Compound 1 exhibited the highest zone of inhibition of 19.4 mm against Bacillus subtilis. Additionally, compounds showed free-radical scavenging effects in DPPH assay with the IC50 values of 8.8, 7.7 and 7.9 µg/mL for compound 1, 2 and 3, respectively. However, they displayed some general toxicity in BSL assay. Conclusion: The isolation of bioactive compounds 1-3 supports some traditional medicinal uses of this plant. However, general toxicities found in the BSL assay might raise concerns regarding its safety, while offering a new avenue of future investigation on cytotoxicity of these compounds against human cancer cell lines

A Bayesian Model for Detection of Highorder Interactions Among Genetic Variants in Genome-Wide Association Studies

Background: A central question for disease studies and crop improvements is how genetics variants drive phenotypes. Genome Wide Association Study (GWAS) provides a powerful tool for characterizing the genotypephenotype relationships in complex traits and diseases. Epistasis (gene-gene interaction), including high-order interaction among more than two genes, often plays important roles in complex traits and diseases, but current GWAS analysis usually just focuses on additive effects of single nucleotide polymorphisms (SNPs). The lack of effective computational modelling of high-order functional interactions often leads to significant under-utilization of GWAS data. Results: We have developed a novel Bayesian computational method with a Markov Chain Monte Carlo (MCMC) search, and implemented the method as a Bayesian High-order Interaction Toolkit (BHIT) for detecting epistatic interactions among SNPs. BHIT first builds a Bayesian model on both continuous data and discrete data, which is capable of detecting high-order interactions in SNPs related to case—control or quantitative phenotypes. We also developed a pipeline that enables users to apply BHIT on different species in different use cases. Conclusions: Using both simulation data and soybean nutritional seed composition studies on oil content and protein content, BHIT effectively detected some high-order interactions associated with phenotypes, and it outperformed a number of other available tools. BHIT is freely available for academic users at http://digbio.missouri.edu/BHIT/

The Role of Ethnic Directors in Corporate Social Responsibility: Does Culture matter? The Cultural Trait Theory Perspectives

This paper investigates the effect of cultural differences between ethnic directors on corporate social responsibility (CSR) of Public Liability Companies (PLCs) in Nigeria. Using the cultural trait theory, the study focuses on how the ethnic directors are influenced when making decisions concerning CSR. Adopting multiple regression analysis of data, the study investigates the three major ethnic groups (Yoruba, Igbo and Hausa) and finds cultural differences between the ethnic directors affect the adoption of CSR. Empirical results indicate that ethnic directors (Yoruba, Igbo and Hausa) were positively and significantly related to CSR. The paper contributes to the corporate governance and CSR debate concerning how ethnic directors’ decisions impact on CSR activities, particularly on the directors who are individualistic and collectivists towards CSR