A selected history of expectation bias in physics

The beliefs of physicists can bias their results towards their expectations in a number of ways. We survey a variety of historical cases of expectation bias in observations, experiments, and calculations.Comment: 6 pages, 2 figure

Micro‐ornamentation patterns in different areas of the epidermis in the gecko Tarentola mauritanica reflect variations in the accumulation of corneous material in Oberhautchen cells

Micro-ornamentations characterize the surface of scales in lepidosaurians and are summarized in four main patterns, i.e., spi- nulated, lamellated, lamellate-dentate, and honeycomb, although variations of these patterns are present in different species. Although geckos are known to possess a spinulated pattern derived from the Oberhautchen layer, also other pattern variations of the spinulated micro-ornamentation are present such as those indicated as dendritic ramification, corneous belts, and small bare patches. The present study mainly describes the variation of micro-ornamentations present in scales of different skin regions in the Mediterranean gecko Tarentula mauritanica using scannig and transmission electron microscopy. The study reports that the accumulation of corneous material in Oberhautchen cells is not homogenous in different areas of body scales and, when mature, this process gives rise to different sculpturing on the epidermal surface generating not only spinulae but also transitional zones leading to the other main patterns. It is hypothesized that spinulae formation derives from the verti- cal and lateral symmetric growth of tubercolate, non-overlapped scales of geckos. Sparse areas also result smooth or with serpentine-ridges likely revealing the beta-layer located underneath and merged with the Oberhautchen. The eco-functional role of this variable micro-ornamentation in the skin of lizards however remains largely speculative

Host-selected mutations converging on a global regulator drive an adaptive leap towards symbiosis in bacteria

Host immune and physical barriers protect against pathogens but also impede the establishment of essential symbiotic partnerships. To reveal mechanisms by which beneficial organisms adapt to circumvent host defenses, we experimentally evolved ecologically distinct bioluminescent Vibrio fischeri by colonization and growth within the light organs of the squid Euprymna scolopes. Serial squid passaging of bacteria produced eight distinct mutations in the binK sensor kinase gene, which conferred an exceptional selective advantage that could be demonstrated through both empirical and theoretical analysis. Squid-adaptive binK alleles promoted colonization and immune evasion that were mediated by cell-associated matrices including symbiotic polysaccharide (Syp) and cellulose. binK variation also altered quorum sensing, raising the threshold for luminescence induction. Preexisting coordinated regulation of symbiosis traits by BinK presented an efficient solution where altered BinK function was the key to unlock multiple colonization barriers. These results identify a genetic basis for microbial adaptability and underscore the importance of hosts as selective agents that shape emergent symbiont populations

Genome-wide signatures of population bottlenecks and diversifying selection in European wolves

Genomic resources developed for domesticated species provide powerful tools for studying the evolutionary history of their wild relatives. Here we use 61K single-nucleotide polymorphisms (SNPs) evenly spaced throughout the canine nuclear genome to analyse evolutionary relationships among the three largest European populations of grey wolves in comparison with other populations worldwide, and investigate genome-wide effects of demographic bottlenecks and signatures of selection. European wolves have a discontinuous range, with large and connected populations in Eastern Europe and relatively smaller, isolated populations in Italy and the Iberian Peninsula. Our results suggest a continuous decline in wolf numbers in Europe since the Late Pleistocene, and long-term isolation and bottlenecks in the Italian and Iberian populations following their divergence from the Eastern European population. The Italian and Iberian populations have low genetic variability and high linkage disequilibrium, but relatively few autozygous segments across the genome. This last characteristic clearly distinguishes them from populations that underwent recent drastic demographic declines or founder events, and implies long-term bottlenecks in these two populations. Although genetic drift due to spatial isolation and bottlenecks seems to be a major evolutionary force diversifying the European populations, we detected 35 loci that are putatively under diversifying selection. Two of these loci flank the canine platelet-derived growth factor gene, which affects bone growth and may influence differences in body size between wolf populations. This study demonstrates the power of population genomics for identifying genetic signals of demographic bottlenecks and detecting signatures of directional selection in bottlenecked populations, despite their low background variability.Heredity advance online publication, 18 December 2013; doi:10.1038/hdy.2013.122

Objectification in Action: Self- and Other-Objectification in Mixed-Sex Interpersonal Interactions

Although the process of sexual objectification is theorized to occur within interpersonal interactions, we believe this is the first study to examine sexual objectification and self-objectification in actual (nonconfederate) interpersonal encounters. Men and women were brought into the laboratory and interacted in mixed-sex dyads. We used dyadic analysis to detect whether partners’ objectification of each other affected state self-objectification, and the resulting feelings of comfort and authenticity during the interaction. After the interaction, participants completed a cognitive performance task, a measure of career aspirations, and a measure of relationship agency. Results showed that for women only, being objectified by their male interaction partner was associated with an increase in state self-objectification, and state self-objectification led to perceptions that the interaction was less comfortable and less authentic. Furthermore, for women but not for men, having authentic interactions was found to relate positively to relationship agency, career aspirations, and cognitive performance. This research shows that self-objectification is not only a self-process but an interpersonal process heightened by the real-time sexual objectification of a male interaction partner. Online slides for instructors who want to use this article for teaching are available to PWQ subscribers on PWQ\u27s website at http://pwq.sagepub.com/supplementa

Little owl (Athene noctua): nuclear and mitochondrial DNA analysis reveals divergence of soutwestern and central european subspecies

We utilized mitochondrial and nuclear DNA to study the phylogeography of little owls (Athene noctua) across Europe. Data from 326 individuals distributed among 22 sites were used to assess geographical distribution of the European subspecies, i.e., the widely accepted vidalii, noctua and indigena, and the questioned sarda-species. On the basis of the sequences of two mtDNA markers (CRI D-Loop 494 bp and COI 679 bp), we found a major difference between a first haplogroup, distributed in the North-West (from Iberia to Denmark and Czech Republic) and three other clades, distributed in the South-Eastern part of the study area. In particular we found a second group distributed in the Balkans and a third located in Sardinia, while in Italy there was a mixture between a fourth haplogroup of South-Italy and both the North-West and the Balkan clades. All individuals sampled in Sardinian differed clearly from other haplogroups. The combined analyses of the 13 nuclear microsatellite loci corroborated these results. Both mitochondrial and nuclear markers showed that interaction across contact zones generate a mixture of genotypes not only in Italy, but also in Central Europe. The apparent position of the contact zones differs substantially from the subspecies distribution reported in literature. DNA data are consistent with the phylogeographic hypothesis that this species survived the Pleistocene glaciations in three major refugia located in Iberia, South Italy, and the Balkans. Expansion patterns indicate that little owls from the Iberian refugium were the predominant source of postglacial colonization of northern Europe, while expansion out of South-Italy and Balkans had more limited effects

Overwintering fires in boreal forests

Forest fires are usually viewed within the context of a single fire season, in which weather conditions and fuel supply can combine to create conditions favourable for fire ignition—usually by lightning or human activity—and spread1–3. But some fires exhibit ‘overwintering’ behaviour, in which they smoulder through the non-fire season and flare up in the subsequent spring4,5. In boreal (northern) forests, deep organic soils favourable for smouldering6, along with accelerated climate warming7, may present unusually favourable conditions for overwintering. However, the extent of overwintering in boreal forests and the underlying factors influencing this behaviour remain unclear. Here we show that overwintering fires in boreal forests are associated with hot summers generating large fire years and deep burning into organic soils, conditions that have become more frequent in our study areas in recent decades. Our results are based on an algorithm with which we detect overwintering fires in Alaska, USA, and the Northwest Territories, Canada, using field and remote sensing datasets. Between 2002 and 2018, overwintering fires were responsible for 0.8 per cent of the total burned area; however, in one year this amounted to 38 per cent. The spatiotemporal predictability of overwintering fires could be used by fire management agencies to facilitate early detection, which may result in reduced carbon emissions and firefighting costs