Induction of Resistance with Benzothiadiazole in Sunflower: a Comparison of Biotrophic vs. Necrotrophic Pathosystems

In the present work we aimed at comparing the effect of benzothiadiazole (BTH) treatment on defence reactions of sunflower plants to downy mildew and white rot diseases. BTH treatment resulted in reduced disease symptoms in biotrophic and in the early stage of the necrotrophic interactions. To get a better insight into the effect of BTH, changes in the activities of polyphenol oxidase and peroxidase enzymes, as well as the expression of the host response-associated sunflower genes were examined in the plants. Inoculation with Plasmopara halstedii enhanced the polyphenol oxidase and peroxidase enzyme activities, while inoculation with Sclerotinia sclerotiorum did it only at 4 dpi. However, most importantly, in each case extracts from BTH pretreated and inoculated plants showed the highest polyphenol oxidase and peroxidase enzyme activities. Similarly, the accumulation of GST and PDF transcripts was detected following inoculations with both biotrophic and necrotrophic pathogens, and again, BTH pre-treatment enhanced GST and defensine gene activities in the inoculated plants. We suggest that induction of enzyme activities, as well as of the elevated expression of GST, PDF and PR5 genes by BTH pre-treatment may be a significant part of the induced resistance of sunflower to downy mildew and white rot (white mold)

A Doubly Nudged Elastic Band Method for Finding Transition States

A modification of the nudged elastic band (NEB) method is presented that enables stable optimisations to be run using both the limited-memory quasi-Newton (L-BFGS) and slow-response quenched velocity Verlet (SQVV) minimisers. The performance of this new `doubly nudged' DNEB method is analysed in conjunction with both minimisers and compared with previous NEB formulations. We find that the fastest DNEB approach (DNEB/L-BFGS) can be quicker by up to two orders of magnitude. Applications to permutational rearrangements of the seven-atom Lennard-Jones cluster (LJ7) and highly cooperative rearrangements of LJ38 and LJ75 are presented. We also outline an updated algorithm for constructing complicated multi-step pathways using successive DNEB runs.Comment: 13 pages, 8 figures, 2 table

Host species determines egg size in Oriental cuckoo

© 2018 The Zoological Society of London.The Oriental cuckoo Cuculus optatus is an obligate brood parasite associated with species of the genus Phylloscopus. Four distinct phenotypes of Oriental cuckoo eggs, matching eggshell colour patterns of Arctic warbler Phylloscopus borealis, common chiffchaff (Siberian) P. collybita tristis, yellow-browed warbler P. inornatus and Pallas's leaf warbler P. proregulus, have been identified in the Russian part of its breeding area. We compared egg length, breadth and volume of Oriental cuckoo egg phenotypes with eggs of the corresponding hosts from three geographical regions in Russia: the Urals, Siberia and the Far East. We found significant oometric differences between Oriental cuckoo egg phenotypes. Egg breadth of each cuckoo group matched the egg breadth of the host species, while the length of cuckoo eggs did not match egg length in host species. Our results can be explained in terms of clutch geometry. An egg sticking out above the clutch is likely to be rejected by the host and so breadth should match the host's egg. This constrains cuckoos in maintaining large egg volumes, which are essential for providing a cuckoo chick with the energy required to eject the host eggs and chicks. An increased egg length might compensate for breadth constraints. We suggest that the size of cuckoo eggs might also be affected by parental care - when only one parent is involved in feeding, eggs need to be larger. This might explain why the longest cuckoo eggs belonged to the phenotype parasitizing the smallest host, Pallas's leaf warbler, where only one parent feeds the chicks. In our view, differences in egg sizes of Oriental cuckoo phenotypes provide evidence of their adaptations to brood parasitism on small leaf warbler species.Peer reviewe

Variation in plasma oxidative status and testosterone level in relation to egg-eviction effort and age of brood-parasitic common cuckoo nestlings

To avoid competition for parental care, brood-parasitic Common Cuckoo (Cuculus canorus) nestlings evict all of the host's eggs and nestlings within a few days after hatching. Little is known about the physiological effects of eviction behavior on the cuckoo nestling's oxidative balance or about age-related variation in plasma oxidative status and testosterone level of developing birds. We examined whether the cuckoo nestling's plasma oxidative status was related to prior effort in eviction and quantified variation in the level of reactive oxygen metabolites, of nonenzymatic antioxidant capacity, and of testosterone concentration in plasma at various phases of the cuckoo's development. Levels of both reactive oxygen metabolites and antioxidant capacity were greater in older than in younger nestlings, suggesting that younger nestlings effectively counterbalance their increased production of free radicals, whereas, near fledging, levels of reactive oxygen metabolites increase despite improved antioxidant capacity. Possibly, overall energy expenditure increases with age and elevates the production of reactive oxygen species to a rate higher than what the antioxidant system could eliminate. Plasma testosterone level was the highest at nestlings' intermediate phase of growth. High levels of testosterone may be required during the period of fastest growth, and when the growth rate levels off near fledging, testosterone levels may also decline. Cuckoo chicks that evicted more host eggs from steeper nests had higher plasma levels of reactive oxygen metabolites shortly after the eviction period, suggesting that eviction is costly in terms of an increased level of oxidative stress. Para evitar la competencia por el cuidado parental, los polluelos parásitos de nidada de Cuculus canorus desalojan todos los huevos y los polluelos del hospedador a los pocos días después de la eclosión. Se sabe poco sobre los efectos fisiológicos del comportamiento de desalojo en el balance oxidativo de los polluelos de C. canorus o sobre la variación en el estatus oxidativo del plasma y el nivel de testosterona relacionado con la edad de las aves en desarrollo. Examinamos si el estatus oxidativo del plasma de los polluelos de C. canorus se relacionaba con un esfuerzo previo de desalojo y cuantificamos la variación en el nivel de metabolitos reactivos de oxígeno, la capacidad antioxidante no enzimática y la concentración de testosterona en el plasma en varias fases del desarrollo de C. canorus. Tanto los niveles de metabolitos reactivos de oxígeno como la capacidad antioxidante fueron superiores en los polluelos de mayor edad que en los más jóvenes, lo que sugiere que los polluelos de menor edad contrarrestan eficazmente el aumento de la producción de radicales libres, mientras que, cuando se apróximan al abandono del nido, los niveles de metabolitos reactivos de oxígeno aumentan a pesar de una mejora en la capacidad antioxidante. Posiblemente, el gasto total de energía se incrementa con la edad, elevándose la producción de formas reactivas de oxígeno a una tasa mayor de la que el sistema antioxidante puede eliminar. El nivel de testosterona en el plasma fue máximo en la fase intermedia del crecimiento de los polluelos. Pueden requerirse altos niveles de testosterona durante el período de mayor crecimiento y, cuando la tasa de crecimiento se estabiliza cerca del abandono del nido, los niveles de testosterona también podrián disminuir. Los polluelos de C. canorus que desalojaron más huevos del hospedador en nidos con una estructura más empinada tuvieron niveles de plasma de metabolitos reactivos de oxígeno en plasma más altos poco después del período de desalojo, sugiriendo que el desalojo es costoso en términos de un incremento en el nivel de estrés oxidativo

BoostingTree: parallel selection of weak learners in boosting, with application to ranking

Boosting algorithms have been found successful in many areas of machine learning and, in particular, in ranking. For typical classes of weak learners used in boosting (such as decision stumps or trees), a large feature space can slow down the training, while a long sequence of weak hypotheses combined by boosting can result in a computationally expensive model. In this paper we propose a strategy that builds several sequences of weak hypotheses in parallel, and extends the ones that are likely to yield a good model. The weak hypothesis sequences are arranged in a boosting tree, and new weak hypotheses are added to promising nodes (both leaves and inner nodes) of the tree using some randomized method. Theoretical results show that the proposed algorithm asymptotically achieves the performance of the base boosting algorithm applied. Experiments are provided in ranking web documents and move ordering in chess, and the results indicate that the new strategy yields better performance when the length of the sequence is limited, and converges to similar performance as the original boosting algorithms otherwise. © 2013 The Author(s)

Hadron Production in Diffractive Deep-Inelastic Scattering

Characteristics of hadron production in diffractive deep-inelastic positron-proton scattering are studied using data collected in 1994 by the H1 experiment at HERA. The following distributions are measured in the centre-of-mass frame of the photon dissociation system: the hadronic energy flow, the Feynman-x (x_F) variable for charged particles, the squared transverse momentum of charged particles (p_T^{*2}), and the mean p_T^{*2} as a function of x_F. These distributions are compared with results in the gamma^* p centre-of-mass frame from inclusive deep-inelastic scattering in the fixed-target experiment EMC, and also with the predictions of several Monte Carlo calculations. The data are consistent with a picture in which the partonic structure of the diffractive exchange is dominated at low Q^2 by hard gluons.Comment: 16 pages, 6 figures, submitted to Phys. Lett.

A Search for Selectrons and Squarks at HERA

Data from electron-proton collisions at a center-of-mass energy of 300 GeV are used for a search for selectrons and squarks within the framework of the minimal supersymmetric model. The decays of selectrons and squarks into the lightest supersymmetric particle lead to final states with an electron and hadrons accompanied by large missing energy and transverse momentum. No signal is found and new bounds on the existence of these particles are derived. At 95% confidence level the excluded region extends to 65 GeV for selectron and squark masses, and to 40 GeV for the mass of the lightest supersymmetric particle.Comment: 13 pages, latex, 6 Figure