Quantum dynamics of the avian compass

The ability of migratory birds to orient relative to the Earth's magnetic field is believed to involve a coherent superposition of two spin states of a radical electron pair. However, the mechanism by which this coherence can be maintained in the face of strong interactions with the cellular environment has remained unclear. This Letter addresses the problem of decoherence between two electron spins due to hyperfine interaction with a bath of spin 1/2 nuclei. Dynamics of the radical pair density matrix are derived and shown to yield a simple mechanism for sensing magnetic field orientation. Rates of dephasing and decoherence are calculated ab initio and found to yield millisecond coherence times, consistent with behavioral experiments

Equilibrium distributions in thermodynamical traffic gas

We derive the exact formula for thermal-equilibrium spacing distribution of one-dimensional particle gas with repulsive potential V(r)=r^(-a) (a>0) depending on the distance r between the neighboring particles. The calculated distribution (for a=1) is successfully compared with the highway-traffic clearance distributions, which provides a detailed view of changes in microscopical structure of traffic sample depending on traffic density. In addition to that, the observed correspondence is a strong support of studies applying the equilibrium statistical physics to traffic modelling.Comment: 5 pages, 6 figures, changed content, added reference

Universal Wait-Free Memory Reclamation

In this paper, we present a universal memory reclamation scheme, Wait-Free Eras (WFE), for deleted memory blocks in wait-free concurrent data structures. WFE's key innovation is that it is completely wait-free. Although some prior techniques provide similar guarantees for certain data structures, they lack support for arbitrary wait-free data structures. Consequently, developers are typically forced to marry their wait-free data structures with lock-free Hazard Pointers or (potentially blocking) epoch-based memory reclamation. Since both these schemes provide weaker progress guarantees, they essentially forfeit the strong progress guarantee of wait-free data structures. Though making the original Hazard Pointers scheme or epoch-based reclamation completely wait-free seems infeasible, we achieved this goal with a more recent, (lock-free) Hazard Eras scheme, which we extend to guarantee wait-freedom. As this extension is non-trivial, we discuss all challenges pertaining to the construction of universal wait-free memory reclamation. WFE is implementable on ubiquitous x86_64 and AArch64 (ARM) architectures. Its API is mostly compatible with Hazard Pointers, which allows easy transitioning of existing data structures into WFE. Our experimental evaluations show that WFE's performance is close to epoch-based reclamation and almost matches the original Hazard Eras scheme, while providing the stronger wait-free progress guarantee

The statistical properties of the city transport in Cuernavaca (Mexico) and Random matrix ensembles

We analyze statistical properties of the city bus transport in Cuernavaca (Mexico) and show that the bus arrivals display probability distributions conforming those given by the Unitary Ensemble of random matrices.Comment: 4 pages, 3 figure

Calibrating Car-Following Models using Trajectory Data: Methodological Study

The car-following behavior of individual drivers in real city traffic is studied on the basis of (publicly available) trajectory datasets recorded by a vehicle equipped with an radar sensor. By means of a nonlinear optimization procedure based on a genetic algorithm, we calibrate the Intelligent Driver Model and the Velocity Difference Model by minimizing the deviations between the observed driving dynamics and the simulated trajectory when following the same leading vehicle. The reliability and robustness of the nonlinear fits are assessed by applying different optimization criteria, i.e., different measures for the deviations between two trajectories. The obtained errors are in the range between~11% and~29% which is consistent with typical error ranges obtained in previous studies. In addition, we found that the calibrated parameter values of the Velocity Difference Model strongly depend on the optimization criterion, while the Intelligent Driver Model is more robust in this respect. By applying an explicit delay to the model input, we investigated the influence of a reaction time. Remarkably, we found a negligible influence of the reaction time indicating that drivers compensate for their reaction time by anticipation. Furthermore, the parameter sets calibrated to a certain trajectory are applied to the other trajectories allowing for model validation. The results indicate that ``intra-driver variability'' rather than ``inter-driver variability'' accounts for a large part of the calibration errors. The results are used to suggest some criteria towards a benchmarking of car-following models

Mechanical unfolding of RNA hairpins

Mechanical unfolding trajectories, generated by applying constant force in optical tweezer experiments, show that RNA hairpins and the P5abc subdomain of the group I intron unfold reversibly. We use coarse-grained Go-like models for RNA hairpins to explore forced-unfolding over a broad range of temperatures. A number of predictions that are amenable to experimental tests are made. At the critical force the hairpin jumps between folded and unfolded conformations without populating any discernible intermediates. The phase diagram in the force-temperature (f,T) plane shows that the hairpin unfolds by an all-or-none process. The cooperativity of the unfolding transition increases dramatically at low temperatures. Free energy of stability, obtained from time averages of mechanical unfolding trajectories, coincide with ensemble averages which establishes ergodicity. The hopping time between the the native basin of attraction (NBA) and the unfolded basin increases dramatically along the phase boundary. Thermal unfolding is stochastic whereas mechanical unfolding occurs in "quantized steps" with great variations in the step lengths. Refolding times, upon force quench, from stretched states to the NBA is "at least an order of magnitude" greater than folding times by temperature quench. Upon force quench from stretched states the NBA is reached in at least three stages. In the initial stages the mean end-to-end distance decreases nearly continuously and only in the last stage there is a sudden transition to the NBA. Because of the generality of the results we propose that similar behavior should be observed in force quench refolding of proteins.Comment: 23 pages, 6 Figures. in press (Proc. Natl. Acad. Sci.

Congested Traffic States in Empirical Observations and Microscopic Simulations

We present data from several German freeways showing different kinds of congested traffic forming near road inhomogeneities, specifically lane closings, intersections, or uphill gradients. The states are localized or extended, homogeneous or oscillating. Combined states are observed as well, like the coexistence of moving localized clusters and clusters pinned at road inhomogeneities, or regions of oscillating congested traffic upstream of nearly homogeneous congested traffic. The experimental findings are consistent with a recently proposed theoretical phase diagram for traffic near on-ramps [D. Helbing, A. Hennecke, and M. Treiber, Phys. Rev. Lett. {\bf 82}, 4360 (1999)]. We simulate these situations with a novel continuous microscopic single-lane model, the ``intelligent driver model'' (IDM), using the empirical boundary conditions. All observations, including the coexistence of states, are qualitatively reproduced by describing inhomogeneities with local variations of one model parameter. We show that the results of the microscopic model can be understood by formulating the theoretical phase diagram for bottlenecks in a more general way. In particular, a local drop of the road capacity induced by parameter variations has practically the same effect as an on-ramp.Comment: Now published in Phys. Rev. E. Minor changes suggested by a referee are incorporated; full bibliographic info added. For related work see http://www.mtreiber.de/ and http://www.helbing.org

Estimating Acceleration and Lane-Changing Dynamics Based on NGSIM Trajectory Data

The NGSIM trajectory data sets provide longitudinal and lateral positional information for all vehicles in certain spatiotemporal regions. Velocity and acceleration information cannot be extracted directly since the noise in the NGSIM positional information is greatly increased by the necessary numerical differentiations. We propose a smoothing algorithm for positions, velocities and accelerations that can also be applied near the boundaries. The smoothing time interval is estimated based on velocity time series and the variance of the processed acceleration time series. The velocity information obtained in this way is then applied to calculate the density function of the two-dimensional distribution of velocity and inverse distance, and the density of the distribution corresponding to the ``microscopic'' fundamental diagram. Furthermore, it is used to calculate the distributions of time gaps and times-to-collision, conditioned to several ranges of velocities and velocity differences. By simulating virtual stationary detectors we show that the probability for critical values of the times-to-collision is greatly underestimated when estimated from single-vehicle data of stationary detectors. Finally, we investigate the lane-changing process and formulate a quantitative criterion for the duration of lane changes that is based on the trajectory density in normalized coordinates. Remarkably, there is a very noisy but significant velocity advantage in favor of the targeted lane that decreases immediately before the change due to anticipatory accelerations

Direct observation of twist mode in electroconvection in I52

I report on the direct observation of a uniform twist mode of the director field in electroconvection in I52. Recent theoretical work suggests that such a uniform twist mode of the director field is responsible for a number of secondary bifurcations in both electroconvection and thermal convection in nematics. I show here evidence that the proposed mechanisms are consistent with being the source of the previously reported SO2 state of electroconvection in I52. The same mechanisms also contribute to a tertiary Hopf bifurcation that I observe in electroconvection in I52. There are quantitative differences between the experiment and calculations that only include the twist mode. These differences suggest that a complete description must include effects described by the weak-electrolyte model of electroconvection