6,072 research outputs found
Highly Excited Core Resonances in Photoionization of Fe XVII : Implications for Plasma Opacities
A comprehensive study of high-accuracy photoionization cross sections is
carried out using the relativistic Breit-Pauli R-matrix (BPRM) method for (hnu
+ Fe XVII --> Fe XVIII + e). Owing to its importance in high-temperature
plasmas the calculations cover a large energy range, particularly the myriad
photoexciation-of-core (PEC) resonances including the n = 3 levels not
heretofore considered. The calculations employ a close coupling wave function
expansion of 60 levels of the core ion Fe XVIII ranging over a wide energy
range of nearly 900 eV between the n = 2 and n = 3 levels. Strong coupling
effects due to dipole transition arrays 2p^5 --> 2p^4 (3s,3d) manifest
themselves as large PEC resonances throughout this range, and enhance the
effective photoionization cross sections orders of magnitude above the
background. Comparisons with the erstwhile Opacity Project (OP) and other
previous calculations shows that the currently available cross sections
considerably underestimate the bound-free cross sections. A
level-identification scheme is used for spectroscopic designation of the 454
bound fine structure levels of Fe XVII. Level-specific photoionization cross
sections are computed for all levels. In addition, partial cross sections for
leaving the core ion Fe XVII in the ground state are also obtained. These
results should be relevant to modeling of astrophysical and laboratory plasma
sources requiring (i) photoionization rates, (ii) extensive
non-local-thermodynamic-equilibrium models, (iii) total unified electron-ion
recombination rates including radiative and dielectronic recombination, and
(iv) plasma opacities. We particularly examine PEC and non-PEC resonance
strengths and emphasize their expanded role to incorporate inner-shell
excitations for improved opacities, as shown by the computed monochromatic
opacity of Fe XVII.Comment: 12 pages, 5 figures, Physical Review A (in press
Magnetic Order Beyond RKKY in the Classical Kondo Lattice
We study the Kondo lattice model of band electrons coupled to classical
spins, in three dimensions, using a combination of variational calculation and
Monte Carlo. We use the weak coupling `RKKY' window and the strong coupling
regime as benchmarks, but focus on the physically relevant intermediate
coupling regime. Even for modest electron-spin coupling the phase boundaries
move away from the RKKY results, the non interacting Fermi surface no longer
dictates magnetic order, and weak coupling `spiral' phases give way to
collinear order. We use these results to revisit the classic problem of 4f
magnetism and demonstrate how both electronic structure and coupling effects
beyond RKKY control the magnetism in these materials.Comment: 6 pages, 4 figs. Improved figures, expanded captions. To appear in
Europhys. Let
Sampling rare fluctuations of height in the Oslo ricepile model
We have studied large deviations of the height of the pile from its mean
value in the Oslo ricepile model. We sampled these very rare events with
probabilities of order by Monte Carlo simulations using importance
sampling. These simulations check our qualitative arguement [Phys. Rev. E, {\bf
73}, 021303, 2006] that in steady state of the Oslo ricepile model, the
probability of large negative height fluctuations about
the mean varies as as with
held fixed, and .Comment: 7 pages, 8 figure
Probability distribution of residence-times of grains in sandpile models
We show that the probability distribution of the residence-times of sand
grains in sandpile models, in the scaling limit, can be expressed in terms of
the survival probability of a single diffusing particle in a medium with
absorbing boundaries and space-dependent jump rates. The scaling function for
the probability distribution of residence times is non-universal, and depends
on the probability distribution according to which grains are added at
different sites. We determine this function exactly for the 1-dimensional
sandpile when grains are added randomly only at the ends. For sandpiles with
grains are added everywhere with equal probability, in any dimension and of
arbitrary shape, we prove that, in the scaling limit, the probability that the
residence time greater than t is exp(-t/M), where M is the average mass of the
pile in the steady state. We also study finite-size corrections to this
function.Comment: 8 pages, 5 figures, extra file delete
Geometric phase for a dimerized disordered continuum: Topological shot noise
Geometric phase shift associated with an electron propagating through a
dimerized-disordered continuum is shown to be 0, or (modulo 2),
according as the associated circuit traversed in the two-dimensional parameter
space excludes, or encircles a certain singularity. This phase-shift is a
topological invariant. Its discontinuous dependence on the electron energy and
disorder implies a statistical spectral and conductance fluctuation in a
corresponding mesoscopic system. Inasmuch as the fluctuation derives from the
discreteness of the phase shift, it may aptly be called a topological
shot-noise.Comment: 10 pages(LATEX) + 1 figure, (revised version). Will appear in
Europhys. Let
CLIQUES FOR IDENTIFICATION OF GENE SIGNATURES FOR COLORECTAL CANCER ACROSS POPULATION
poster abstractIntroduction: Colorectal cancer (CRC) is one of the most common cancers diagnosed worldwide. Studies have correlated CRC with dietary habits and environmental conditions. We developed a novel network based approach where cliques and their connectivity profiles explained the variation and similarity in CRC across four populations- China, Germany, Saudi Arabia and USA.
Methods: Networks generated after data preprocessing were analyzed individually based on topological and biological features. Using greedy algorithm, cliques of various sizes were identified in each network and size 7 cliques were further analyzed based on their clique connectivity profile (CCP). Our algorithm considered the interaction of cliques based on two parameters: (i) Identification of common (links) genes; (ii) CliqueStrength. The cliques were evaluated by two conditions (a) Maximum number of common genes across cliques and highest CliqueStrength and (b) Minimum number of common genes across cliques and highest CliqueStrength.
Results: Large numbers of genes are found to be common between USA, China and Germany. Highly scored nodes based on topological parameters are TP53, SRC, ESR1, SMAD3, GRB2, CREBBP, EGFR, SMAD2, and CSN2KA1. Signal transduction, protein phosphorylation etc., were found to be important GO biological processes. Number of unique size 7 cliques identified in all the population is 650. 49 common cliques identified included genes- EGFR, GRB2, PIK3R1, PTPN6, BRCA1, SMAD2, TP53, CSN2 etc. We found 20 cliques that are uniquely identified for USA, 10 for Germany and one for China. Cliques include genes that are both well studied, less-studied in CRC; but are targets in other cancers.
Conclusion: With CCP, we were able to identify commonality, uniqueness and divergence among the populations. Furthermore, comparing all cliques (their CCP) as gene-signatures across populations can help to identify efficient drug targets. Results were consistent with other studies and demonstrate the power of cliques to study CRC across populations
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