Predicting habitat suitability for basking sharks (Cetorhinus maximus) in UK waters using ensemble ecological niche modelling

This is the author accepted manuscript. The final version is available from Elsevier via the DOI in this record.The basking shark (Cetorhinus maximus) is an endangered species in the north-east Atlantic, having been historically over exploited. Whilst near-shore aggregation hotspots in the UK have been identified, robust knowledge on species distribution and abundance outside these areas remains limited. Research techniques, such as habitat modelling, could however be used to gain a greater knowledge of the species distribution to inform management plans to aid population recovery. For large mobile species gathering wide-scale distribution data can be financially and logistically challenging. In lieu of conducting a UK-wide expensive strategic survey for basking sharks, we use data from two regional-scale surveys, which were conducted in southwest England and western Scotland, and use an Ensemble Ecological Niche Model (EENM) to produce a spatially explicit map of habitat suitability. When compared against a ~20-year database of public sightings of basking sharks across UK coastal seas (to 6 nautical miles offshore), patterns of habitat suitability yielded a statistically significant agreement with areas known to support basking shark sightings. EENMs could be used to advise Marine Protected Area (MPA) selection, as well as to inform environmental impact assessments for offshore developments. The application of EENM outputs could be wide-reaching and benefit not only basking sharks but other large mobile marine species in the north-east Atlantic

Using Cumulative Impact Mapping to Prioritize Marine Conservation Efforts in Equatorial Guinea

This is the final version. Available on open access from Frontiers Media via the DOI in this recordData Availability Statement Ensemble ecological niche models (EENMs) and threat maps (anthropogenic footprint, cumulative impact, and cumulative utilization and impact) for each species (Atlantic humpback dolphin Sousa teuszii; bottlenose dolphin Tursiops truncatus; humpback whale Megaptera novaeangliae; leatherback Dermochelys coriacea; and olive ridley sea turtle Lepidochelys olivacea) are available from the Dryad Digital Repository doi: 10.5061/dryad.v6wwpzgr9 (Trew et al., 2019).Marine biodiversity is under extreme pressure from anthropogenic activity globally, leading to calls to protect at least 10% of the world’s oceans within marine protected areas (MPAs) and other effective area-based conservation measures. Fulfilling such commitments, however, requires a detailed understanding of the distribution of potentially detrimental human activities, and their predicted impacts. One such approach that is being increasingly used to strengthen our understanding of human impacts is cumulative impact mapping; as it can help identify economic sectors with the greatest potential impact on species and ecosystems in order to prioritize conservation management strategies, providing clear direction for intervention. In this paper, we present the first local cumulative utilization impact mapping exercise for the Bioko-Corisco-Continental area of Equatorial Guinea’s Exclusive Economic Zone – situated in the Gulf of Guinea, one of the most important and least studied marine regions in the Eastern Central Atlantic. This study examines the potential impact of ten direct anthropogenic activities on a suite of key marine megafauna species and reveals that the most suitable habitats for these species, located on the continental shelf, are subject to the highest threat scores. However, in some coastal areas, the persistence of highly suitable habitat subject to lower threat scores suggests that there are still several strategic areas that are less impacted by human activity that may be suitable sites for protected area expansion. Highlighting both the areas with potentially the highest impact, and those with lower impact levels, as well as particularly damaging activities can inform the direction of future conservation initiatives in the region.Waitt FoundationWildlife Conservation SocietyDarwin InitiativeDepartment for Environment, Food and Rural Affairs (Defra)Waterloo FoundationNatural Environment Research Council (NERC)Marine Turtle Conservation Fund (United States Fish and Wildlife Service, United States Department of the Interior)Vaalco EnergyHarvest Natural ResourcesSea World and Busch Gardens Conservation FundTullow OilOld Dominion UniversityWWFWildlife Conservation SocietyUniversity of Exete

SCUBA divers as oceanographic samplers: The potential of dive computers to augment aquatic temperature monitoring

Monitoring temperature of aquatic waters is of great importance, with modelled, satellite and in-situ data providing invaluable insights into long-term environmental change. However, there is often a lack of depth-resolved temperature measurements. Recreational dive computers routinely record temperature and depth, so could provide an alternate and highly novel source of oceanographic information to fill this data gap. In this study, a citizen science approach was used to obtain over 7,000 scuba diver temperature profiles. The accuracy, offset and lag of temperature records was assessed by comparing dive computers with scientific conductivity-temperature-depth instruments and existing surface temperature data. Our results show that, with processing, dive computers can provide a useful and novel tool with which to augment existing monitoring systems all over the globe, but especially in under-sampled or highly changeable coastal environments

A novel approach to estimate the distribution, density and at-sea risks of a centrally-placed mobile marine vertebrate

This is the author accepted manuscript. The final version is available from Elsevier via the DOI in this record.Formulating management strategies for mobile marine species is challenging, as knowledge is required of distribution, density, and overlap with putative threats. As a step towards assimilating knowledge, ecological niche models may identify likely suitable habitats for species, but lack the ability to enumerate species densities. Traditionally, this has been catered for by sightings-based distance sampling methods that may have practical and logistical limitations. Here we describe a novel method to estimate at-sea distribution and densities of a marine vertebrate, using historic aerial surveys of Gabonese leatherback turtle (Dermochelys coriacea) nesting beaches and satellite telemetry data of females at sea. We contextualise modelled patterns of distribution with putative threat layers of boat traffic, including fishing vessels and large ship movements, using Vessel Monitoring System (VMS) and Automatic Identification System (AIS) data. We identify key at-sea areas in which protection for inter-nesting leatherback turtles could be considered within the coastal zone of Gabonese Exclusive Economic Zone (EEZ). Our approach offers a holistic technique that merges multiple datasets and methodologies to build a deeper and insightful knowledge base with which to manage known activities at sea. As such, the methodologies presented in this study could be applied to other species of sea turtles for cumulative assessments; and with adaptation, may have utility in defining critical habitats for other central-place foragers such as pinnipeds, or sea bird species. Although our analysis focuses on a single species, we suggest that putative threats identified within this study (fisheries, seismic activity, general shipping) likely apply to other mobile marine vertebrates of conservation concern within Gabonese and central African coastal waters, such as olive ridley sea turtles (Lepidochelys olivacea), humpback dolphins (Sousa teuszii) and humpback whales (Megaptera novaeangliae).We thank the following for support and funding: CARPE (Central African Regional Program for the Environment, Darwin Initiative, EAZA ShellShock Campaign, Gabon Sea Turtle Partnership with funding from the Marine Turtle Conservation Fund (United States Fish and Wildlife Service, U.S. Department of the Interior), Harvest Energy, Large Pelagics Research Centre at the University of Massachusetts (Boston), NERC, Vaalco Energy and the Wildlife Conservation Society. We are sincerely grateful to the field teams and logistics staff who assisted in the aerial and ground surveys and with field-site assistance. BJG and MJW receive funding from the Natural Environment Research Council (NE/J012319/1), the European Union and the Darwin Initiative

Factors driving patterns and trends in strandings of small cetaceans

The incidence of cetacean strandings is expected to depend on a combination of factors, including the dis- tribution and abundance of the cetaceans, their prey, and causes of mortality (e.g. natural, fishery bycatch), as well as currents and winds which affect whether carcasses reach the shore. We investigated spatiotemporal patterns and trends in the numbers of strandings of three species of small cetacean in Galicia (NW Spain) and their relationships with meteoro- logical, oceanographic, prey abundance and fishing-related variables, aiming to disentangle the relationship that may exist between these factors, cetacean abundance and mor- tality off the coast. Strandings of 1166 common dolphins (Delphinus delphis), 118 bottlenose dolphins (Tursiops truncatus) and 90 harbour porpoises (Phocoena phocoena) during 2000–2013 were analysed. Generalised additive and generalised additive-mixed model results showed that the variables which best explained the pattern of strandings of the three cetacean species were those related with local ocean meteorology (strength and direction of the North– South component of the winds and the number of days with South-West winds) and the winter North Atlantic Oscil- lation Index. There were no significant relationships with indices of fishing effort or landings. Only bottlenose dolphin showed possible fluctuations in local abundance over the study period. There was no evidence of long-term trends in number of strandings in any of the species and their abun- dances were, therefore, considered to have been relatively stable during the study period.Versión del editor2,01

Contrasting patterns of population structure and gene flow facilitate exploration of connectivity in two widely distributed temperate octocorals

This is the final version of the article. Available from Springer Nature via the DOI in this record.Connectivity is an important component of metapopulation dynamics in marine systems and can influence population persistence, migration rates and conservation decisions associated with Marine Protected Areas (MPAs). In this study, we compared the genetic diversity, gene flow and population structure of two octocoral species, Eunicella verrucosa and Alcyonium digitatum, in the northeast Atlantic (ranging from the northwest of Ireland and the southern North Sea, to southern Portugal), using two panels of thirteen and eight microsatellite loci, respectively. Our results identified regional genetic structure in E. verrucosa partitioned between populations from southern Portugal, northwest Ireland, and Britain/France; subsequent hierarchical analysis of population structure also indicated reduced gene flow between southwest Britain and northwest France. However, over a similar geographical area, A. digitatum showed little evidence of population structure, suggesting high gene flow and/or a large effective population size; indeed, the only significant genetic differentiation detected in A. digitatum occurred between North Sea samples and those from the English Channel/northeast Atlantic. In both species the vast majority of gene flow originated from sample sites within regions, with populations in southwest Britain being the predominant source of contemporary exogenous genetic variants for the populations studied. Unsurprisingly, historical patterns of gene flow appeared more complex, though again southwest Britain appeared an important source of genetic variation for both species. Our findings have major conservation implications, particularly for E. verrucosa, a protected species in UK waters and listed by the IUCN as ‘Vulnerable’, and for the designation and management of European MPAs.We thank Natural England (project No. RP0286, contract No. SAE 03-02-146), the NERC (grant No. NE/L002434/1) and the University of Exeter for funding this research. Additional funding for sample collection, travel and microsatellite development was provided by the EU Framework 7 ASSEMBLE programme, agreement no. 227799, and NERC grant No. NBAF-362

Revisiting UK Marine Protected Areas governance: A case study of a collaborative approach to management of an English MPA

This is the author accepted manuscript. The final version is available from Wiley via the DOI in this recordCase studies of Marine Protected Area (MPA) upscaling were solicited from participants of a workshop at the International Marine Protected Areas Conference held in Autumn 2013 in Marseille. One such case study was Solandt, Jones, Duval‐Diop, Kleiven, and Frangoudes (2014; Governance challenges in scaling up from individual MPAs to MPA networks. Aquatic Conservation: Marine and Freshwater Ecosystems, 24, 145–152) which illustrated the role of science, non‐governmental organizations, government and local regulators in applying systemic management measures for local MPAs based on risk, highlighting the importance of balancing top‐down and bottom‐up drivers. Here we follow up on the UK example, illustrating the incentives and actors involved in developing centralized and subsequent fisheries management measures in UK waters. Forty local laws were created to protect features in 143 inshore MPAs between 2013 and 2019. We illustrate best practice in delivering management, focusing on multiple practitioner involvement in a single MPA and the monitoring put in place after trawling and dredging were banned. We reflect on how the governance mechanisms in place in English inshore waters can be used as a template to allow for progressive MPA management in other coastal states.Marine Conservation SocietyPigShed TrustPrincess Yacht

Pink sea fans (Eunicella verrucosa) as indicators of the spatial efficacy of Marine Protected Areas in southwest UK coastal waters

This is a freely-available open access publication. Please cite the published version which is available via the DOI link in this record.Globally, the need to identify and establish integrated and connected systems of Marine Protected Areas (MPAs) is becoming increasingly recognised. For best practice, these networks need to be planned and assessed against multiple criteria. However, building a sound evidence base to support decision-making processes is complex, as well as fiscally and logistically challenging. Recent studies have demonstrated the utility of integrating ‘citizen science’ data into mainstream scientific analysis, particularly where broad-scale spatial patterns of distribution are required. In UK waters, the pink sea fan (Eunicella verrucosa) is a nationally protected slow growing, cold-water coral, and is a representative species of reef features that provide habitat for many other sessile species. However, this species is vulnerable to physical impact and loss of suitable substratum, and is likely highly vulnerable to bottom-towed fishing gears. In this study, data from a volunteer-based marine survey programme (‘Seasearch’) are analysed with the aim of describing the spatial distribution and relative abundance of pink sea fan colonies throughout southwest UK coastal waters. The congruence between pink sea fans and the extant southern UK MPA network is reported, and the current threat from Bottom-Towed Gear (BTG) to pink sea fan dominated reefs, that have historically lacked protection, is quantitatively assessed. This analysis reveals that protection of this and other benthic species has been increased by management of previously ‘open access’ MPAs. Nonetheless, areas of pink sea fan habitat and their host reef systems exist outside extant protected areas in southwest UK seas, and as such are potentially at risk from bottom-towed fisheries. This analysis demonstrates the utility of well-organised citizen science data collection and highlights how such efforts can help inform knowledge on broad scale patterns of biodiversity.Natural Environment Research CouncilEuropean UnionDarwin InitiativePig Shed Trus

The true depth of the Mediterranean plastic problem: Extreme microplastic pollution on marine turtle nesting beaches in Cyprus

We sampled 17 nesting sites for loggerhead (Caretta caretta) and green turtles (Chelonia mydas) in Cyprus. Microplastics (<5 mm) were found at all locations and depths, with particularly high abundance in superficial sand. The top 2 cm of sand presented grand mean ± SD particle counts of 45,497 ± 11,456 particles m−3 (range 637–131,939 particles m−3). The most polluted beaches were among the worst thus far recorded, presenting levels approaching those previously recorded in Guangdong, South China. Microplastics decreased with increasing sand depth but were present down to turtle nest depths of 60 cm (mean 5,325 ± 3,663 particles m−3. Composition varied among beaches but hard fragments (46.5 ± 3.5%) and pre-production nurdles (47.8 ± 4.5%) comprised most categorised pieces. Particle drifter analysis hindcast for 365 days indicated that most plastic likely originated from the eastern Mediterranean basin. Worsening microplastic abundance could result in anthropogenically altered life history parameters such as hatching success and sex ratios in marine turtles