Novel functionalised Troger's bases: synthesis of a new class of Troger's base analogues containing dicarboxyl functionality

The synthesis of three new Troger's base analogues, each functionalized with two carboxyl groups, is described

A new bile acid-based ditopic adenine/biotin receptor with convergent carboxyl groups

Careful molecular modeling has been done to design receptor 4 which was synthesized in three simple steps from methyl deoxycholate and showed high association constants for the binding with 9-butyladenine (1) and biotin methyl ester (2) in deutero-chloroform

Binding of 9-N-Butyladenine by Carboxylic Acids: Evidence that Hoogsteen Binding Can Dominate in Solution

H-1 NMR titration of 9-N-butyladenine (1) with a series of 1 1 rt presentative carboxylic acids has been carried out in CDCl3 by following the chemical shifts of delta(H-2) and delta(H-8) of 1 to determine the association constants for the Watson-Crick and the Hoogsteen modes of binding. Compound 1 has been found to bind carboxylic acids through the Watson-Crick (WC) site or the Hoogsteen (I-IG) site. The binding of carboxylic acids from the WC site shifts the delta(H-2) signal upfield, whereas the binding from the HG site shifts the delta(H-8) Signal downfield. Analyses of binding-induced shifts of delta(H-2) and delta(H-8) of 1 in the presence of the carboxylic acids have indicated a distinct preference Sor the HG site by aromatic carboxylic acids, such as benzoic acid and monobenzyl isophthalate. On the other hand, aliphatic acids such as 4-nitrophenylacetic acid and propanoic acid are found to prefer the WC site for complexing 1. Binding affinities of a few alkenoic and alkynoic acids were also determined. In addition to the complexes (1/acid) of I:I stoichiometry, the possibility of a 1:2 complexation between 1 and the carboxylic acids is addressed. A possible rationale for the upfield shift of H-2 (of 1) upon binding by a carboxylic acid is discussed. The K-a's were found to increase in general with enhanced acidity of the carboxylic acids. However, the pK(a) values of the acids do not appear to determine the site-specificity of the binding of 1

Novel Functionalised Troger's Bases: Synthesis of a New Class of Troger's Base Analogues Containing Dicarboxyl Functionality

The synthesis of three new Troger's base analogues, each functionalized with two carboxyl groups, is described. Copyright