Effect of oxygen fugacity on the storage of water in wadsleyite and olivine in H and H–C fluids and implications for melting atop the transition zone

This study aims to experimentally constrain the water storage capacities of olivine and wadsleyite at a depth near 410 km (12–14 GPa) under water-saturated conditions, as a function of temperature, oxygen fugacity, and the presence of carbon (molar H / C of 2). Experiments have been conducted in the multi-anvil press, with sealed double capsules to preserve fluids, at 1200 to 1400 ∘C and three different oxygen fugacities fixed at the rhenium–rhenium oxide buffer (RRO), nickel–nickel oxide buffer (NNO), and iron-wüstite (IW) for oxidizing, intermediate, and reducing conditions, respectively. The water contents of minerals were measured by Raman spectroscopy that allows a very small beam size to be used and were cross-checked on a few samples with NanoSIMS analyses. We observe an effect, although slight, of fO2 on the water storage capacity of both wadsleyite and olivine and also on their solidus temperatures. At 1200 ∘C, the storage capacity of the nominally anhydrous minerals (NAMS) increases with increasing oxygen fugacity (from the IW to the RRO buffer) from 1 wt % to 1.5 wt % H2O in wadsleyite and from 0.1 wt % to 0.2 wt % in olivine, owing to the increase in H2O / H2 speciation in the fluid, whereas at 1400 ∘C the storage capacity decreases from 1 wt % to 0.75 wt % H2O in wadsleyite and down to 0.03 wt % for olivine. At high temperature, the water storage capacity is lowered due to melting, and the more oxidized the conditions are the more the solidus is depressed. Still, at 1400 ∘C and IW, wadsleyite can store substantial amounts of water: 0.8 wt % to 1 wt % H2O. The effect of carbon is to decrease water storage capacity in both wadsleyite and olivine by an average factor 2 at 1300–1400 ∘C. The trends in water storage as a function of fO2 and C presence are confirmed by NanoSIMS measurements. The solidus at IW without C is located between 1300 and 1400 ∘C in the wadsleyite stability field and drops to temperatures below 1300 ∘C in the olivine stability field. With the addition of C, the solidus is found between 1200 and 1300 ∘C in both olivine and wadsleyite stability fields.</p

An overview of activity-based probes for glycosidases

As the scope of modern genomics technologies increases, so does the need for informative chemical tools to study functional biology. Activity-based probes (ABPs) provide a powerful suite of reagents to probe the biochemistry of living organisms. These probes, featuring a specificity motif, a reactive chemical group and a reporter tag, are opening-up large swathes of protein chemistry to investigation in vitro, as well as in cellular extracts, cells and living organisms in vivo. Glycoside hydrolases, by virtue of their prominent biological and applied roles, provide a broad canvas on which ABPs may illustrate their functions. Here we provide an overview of glycosidase ABP mechanisms, and review recent ABP work in the glycoside hydrolase field, encompassing their use in medical diagnosis, their application for generating chemical genetic disease models, their fine-tuning through conformational and reactivity insight, their use for high-throughput inhibitor discovery, and their deployment for enzyme discovery and dynamic characterization.Medical BiochemistryBio-organic Synthesi

Environmental chemicals impact dog semen quality in vitro and may be associated with a temporal decline in sperm motility and increased cryptorchidism

Adverse temporal trends in human semen quality and cryptorchidism in infants have been associated with exposure to environmental chemicals (ECs) during development. Here we report that a population of breeding dogs exhibit a 26 year (1988–2014) decline in sperm quality and a concurrent increased incidence of cryptorchidism in male offspring (1995–2014). A decline in the number of males born relative to the number of females was also observed. ECs, including diethylhexyl phthalate (DEHP) and polychlorinated biphenyl 153 (PCB153), were detected in adult dog testes and commercial dog foods at concentrations reported to perturb reproductive function in other species. Testicular concentrations of DEHP and PCB153 perturbed sperm viability, motility and DNA integrity in vitro but did not affect LH stimulated testosterone secretion from adult testis explants. The direct effects of chemicals on sperm may therefore contribute to the decline in canine semen quality that parallels that reported in the human

Proposed Role for COUP-TFII in Regulating Fetal Leydig Cell Steroidogenesis, Perturbation of Which Leads to Masculinization Disorders in Rodents

Reproductive disorders that are common/increasing in prevalence in human males may arise because of deficient androgen production/action during a fetal ‘masculinization programming window’. We identify a potentially important role for Chicken Ovalbumin Upstream Promoter-Transcription Factor II (COUP-TFII) in Leydig cell (LC) steroidogenesis that may partly explain this. In rats, fetal LC size and intratesticular testosterone (ITT) increased ∼3-fold between e15.5-e21.5 which associated with a progressive decrease in the percentage of LC expressing COUP-TFII. Exposure of fetuses to dibutyl phthalate (DBP), which induces masculinization disorders, dose-dependently prevented the age-related decrease in LC COUP-TFII expression and the normal increases in LC size and ITT. We show that nuclear COUP-TFII expression in fetal rat LC relates inversely to LC expression of steroidogenic factor-1 (SF-1)-dependent genes (StAR, Cyp11a1, Cyp17a1) with overlapping binding sites for SF-1 and COUP-TFII in their promoter regions, but does not affect an SF-1 dependent LC gene (3β-HSD) without overlapping sites. We also show that once COUP-TFII expression in LC has switched off, it is re-induced by DBP exposure, coincident with suppression of ITT. Furthermore, other treatments that reduce fetal ITT in rats (dexamethasone, diethylstilbestrol (DES)) also maintain/induce LC nuclear expression of COUP-TFII. In contrast to rats, in mice DBP neither causes persistence of fetal LC COUP-TFII nor reduces ITT, whereas DES-exposure of mice maintains COUP-TFII expression in fetal LC and decreases ITT, as in rats. These findings suggest that lifting of repression by COUP-TFII may be an important mechanism that promotes increased testosterone production by fetal LC to drive masculinization. As we also show an age-related decline in expression of COUP-TFII in human fetal LC, this mechanism may also be functional in humans, and its susceptibility to disruption by environmental chemicals, stress and pregnancy hormones could explain the origin of some human male reproductive disorders

Cloning and expression analysis of insulin-like growth factor I and II in liver and muscle of sea bass (Dicentrarchus labrax, L) during long-term fasting and refeeding.

The exceptionally fast growth that fish experience after periods of fasting has been called 'compensatory growth' or 'catch-up' growth. This phenomenon, reported in a wide range of fish species, has been studied in intensive aquaculture as a means of enhancing feed conversion efficiency, but the mechanisms implicated are complex and not yet fully understood. In the present study, the authors describe the cloning and sequencing of the complete coding sequences of sea bass (Dicentrarchus labrax) insulin-like growth factor-I (IGF-I) and insulin-like growth factor-II (IGF-II), which are potent mitogens known to play important roles in growth and development. Sea bass IGF-I has an open reading frame (ORF) of 561 bp that encodes a mature protein of 187 amino acids, whereas IGF-II has an ORF of 648 bp encoding a mature protein of 216 amino acids. At the amino acid level, sea bass IGF-I shares a 30% similarity with IGF-II. The authors then report the pattern of IGF-I and IGF-II gene expression in liver and myotomal muscle in response to prolonged fasting and refeeding. Nutritional status significantly influenced IGF-I messenger RNA copy number in both liver and muscle, inducing a down-regulation during fasting and an up-regulation during the recovery from fasting. The trend of IGF-II response was similar, but different feeding regimens did not affect the amounts of transcript as sharply as in IGF-I. Taken together these data indicate that IGF-I and IGF-II participate in promoting sea bass muscle compensatory growth induced by refeeding