731 research outputs found
Review of the initial validation and characterization of a chicken 3K SNP array.
In 2004 the chicken genome sequence and more than 2.8 million single nucleotide polymorphisms (SNPs) were reported. This information greatly enhanced the ability of poultry scientists to understand chicken biology, especially with respect to identification of quantitative trait loci (QTL) and genes that control simple and complex traits. To validate and address the quality of the reported SNPs, assays for 3072 SNPS were developed and used to genotype 2576 DNAs isolated from commercial and experimental birds. Over 90% of the SNPs were valid based on the criterion used for segregating, and over 88% had a minor allele frequency of 2% or greater. As the East Lansing (EL) and Wageningen University (WAU) reference panels were genotyped, 1933 SNPs were added to the chicken genetic map, which was used in the second chicken genome sequence assembly. It was also discovered that linkage disequilibrium varied considerably between commercial layers and broilers; with the latter having haplotype blocks averaging 10 to 50 kb in size. Finally, it was estimated that commercial lines have lost 70% or more of their genetic diversity, with the majority of allele loss attributable to the limited number of chicken breeds used
Ultrafast Photoinduced Formation of Metallic State in a Perovskite-type Manganite with Short Range Charge and Orbital Order
Femtosecond reflection spectroscopy was performed on a perovskite-type
manganite, Gd0.55Sr0.45MnO3, with the short-range charge and orbital order
(CO/OO). Immediately after the photoirradiation, a large increase of the
reflectivity was detected in the mid-infrared region. The optical conductivity
spectrum under photoirradiation obtained from the Kramers-Kronig analyses of
the reflectivity changes demonstrates a formation of a metallic state. This
suggests that ferromagnetic spin arrangements occur within the time resolution
(ca. 200 fs) through the double exchange interaction, resulting in an ultrafast
CO/OO to FM switching.Comment: 4 figure
Optical conductivity in doped manganites with planar x-y orbital order
We investigate a planar model for the ferromagnetic (FM) phase of manganites,
which develops orbital order of electrons with x-y-symmetry at
low temperature. The dynamic structure factor of orbital excitations and the
optical conductivity are studied with help of a
finite-temperature diagonalization method. Our calculations provide a
theoretical prediction for for the 2D FM state and are of
possible relevance for the recently found A-type phase of manganites at high
doping which consists of FM layers coupled antiferromagnetically. In the
x-y ordered regime shows both a Drude peak and a
gapped incoherent absorption due to a gap in the orbital excitations.Comment: 5 pages, 5 figures, to appear in Phys. Rev. Let
Dynamic Kerr Effect and Spectral Weight Transfer in the Manganites
We perform pump-probe Kerr spectroscopy in the colossally magnetoresistive
manganite Pr0.67Ca0.33MnO3. Kerr effects uncover surface magnetic dynamics
undetected by established methods based on reflectivity and optical spectral
weight transfer. Our findings indicate the connection between spin and charge
dynamics in the manganites may be weaker than previously thought. Additionally,
important differences between this system and conventional ferromagnetic metals
manifest as long-lived, magneto-optical coupling transients, which may be
generic to all manganites.Comment: 12 text pages, 4 figure
Colossal magnetooptical conductivity in doped manganites
We show that the current carrier density collapse in doped manganites, which
results from bipolaron formation in the paramagnetic phase, leads to a colossal
change of the optical conductivity in an external magnetic field at
temperatures close to the ferromagnetic transition. As with the colossal
magnetoresistance (CMR) itself, the corresponding magnetooptical effect is
explained by the dissociation of localized bipolarons into mobile polarons
owing to the exchange interaction with the localized Mn spins in the
ferromagnetic phase. The effect is positive at low frequencies and negative in
the high-frequency region. The present results agree with available
experimental observations.Comment: 4 pages, REVTeX 3.0, two eps-figures included in the tex
Magnetic Field resulting from non-linear electrical transport in single crystals of charge-ordered Pr Ca MnO}
In this letter we report that the current induced destabilization of the
charge ordered (CO) state in a rare-earth manganite gives rise to regions with
ferromagnetic correlation. We did this experiment by measurement of the I-V
curves in single crystal of the CO system
PrCaMnO and simultanously measuring the magnetization
of the current carrying conductor using a high T SQUID working at T = 77K.
We have found that the current induced destabilization of the CO state leads to
a regime of negative differential resistance which leads to a small enhancement
of the magnetization of the sample, indicating ferromagnetically aligned
moments.Comment: 4 pages LateX, 4 eps figure
Effect of disorder on the magnetic and transport properties of La_{1-x}Sr_{x}MnO_{3}
We study a simplified model of the electronic structure of compounds of the
type of LaSrMnO. The model represents each Mn ion by a
spin S=1/2, on which an electron can be added to produce Mn. We include
two strong intratomic interactions in the Hamiltonian: exchange (% ) and
Coulomb (). Finally, to represent the effect of Sr substitution by La in a
simple way, we include a distribution of diagonal energies at the Mn sites.
Then we use Green function techniques to calculate a mobility edge and the
average density of states. We find that according to the amount of disorder and
to the concentration of electrons in the system, the Fermi level can cross the
mobility edge to produce a metal to insulator transition as the magnetization
decreases (increase of temperature). If the disorder is large, the system
remains insulating for all concentrations. Concentrations near zero or one
favor the insulating state while intermediate values of concentration favor the
metallic state.Comment: 11 pages, 4 figures available upon request, accepted for publication
in Solid State Communication
Incoherent Charge Dynamics in Perovskite Manganese Oxides
A minimal model is proposed for the perovskite manganese oxides showing the
strongly incoherent charge dynamics with a suppressed Drude weight in the
ferromagnetic and metallic phase near the insulator. We investigate a
generalized double-exchange model including three elements; the orbital
degeneracy of conduction bands, the Coulomb interaction and fluctuating
Jahn-Teller distortions. We demonstrate that Lanczs
diagonalization calculations combined with Monte Carlo sampling of the largely
fluctuating lattice distortions result in the optical conductivity which
quantitatively accounts for the experimental indications. It is found that all
the three elements are indispensable to understand the charge dynamics in these
compounds.Comment: 4 pages with 1 page of figures. To appear in J. Phys. Soc. Jp
Electronic Raman scattering and photoluminescence from LaSrMnO exhibiting giant magnetoresistance
Raman and Photoluminescence (PL) experiments on correlated metallic
LaSrMnO have been carried out using different excitation
wavelengths as a function of temperature from 15 K to 300 K. Our data suggest a
Raman mode centered at 1800 cm and a PL band at 2.2 eV. The intensities
of the two peaks decrease with increasing temperature. The Raman mode can be
attributed to a plasmon excitation whose frequency and linewidths are
consistent with the measured resistivities. The PL involves intersite
electronic transitions of the manganese ions.Comment: 10 pages + 4 eps figures, Revtex 3.0, figures available on reques
Static and Dynamical Properties of the Ferromagnetic Kondo Model with Direct Antiferromagnetic Coupling Between the localized Electrons
The phase diagram of the Kondo lattice Hamiltonian with ferromagnetic Hund's
coupling in the limit where the spin of the localized electrons is
classical is analyzed in one dimension as a function of temperature, electronic
density, and a direct antiferromagnetic coupling between the localized
spins. Studying static and dynamical properties, a behavior that qualitatively
resembles experimental results for manganites occurs for smaller than 0.11
in units of the hopping amplitude. In particular a coexistence of
ferromagnetic and antiferromagnetic excitations is observed at low-hole density
in agreement with neutron scattering experiments on
with. This effect is caused by the
recently reported tendency to phase separation between hole-rich ferromagnetic
and hole-undoped antiferromagnetic domains in electronic models for manganites.
As increases metal-insulator transitions are detected by monitoring the
optical conductivity and the density of states. The magnetic correlations
reveal the existence of spiral phases without long-range order but with fairly
large correlation lengths. Indications of charge ordering effects appear in the
analysis of charge correlations.Comment: 14 pages with 25 eps figures embeded in the tex
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