100 research outputs found

    Fractality and topology of optical singularities

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    Optical singularities are points in complex scalar and vector fields where a property of the field becomes undefined (singular). In complex scalar fields these are phase singularities and in vector fields they are polarisation singularities. In the former the phase of the field is singular and in the latter it is the polarisation ellipse axes. In three dimensions these singularities are lines and natural light fields are threaded by these lines. The interference between three, four and five waves is investigated and inequalities are given which establish the topology of the singularity lines in fields composed of four plane waves. Beyond several waves, numerical simulations are used, supported by experiments, to establish that optical singularties in speckle fields have the fractal properties of a Brownian random walk. Approximately 73% of singularity lines percolate random optical fields, the remainder forming closed loops. The statistical results are found to be similar to those of vortices in random discrete lattice models of cosmic strings, implying that the statistics of singularities in random optical fields exhibit universal behavior. It is also established that a random superposition of plane-waves, such as optical speckle, form singularities which not only map out fractal lines, but create topological features within them. These topological features are rare and include vortex loops which are threaded by infinitely long lines and pairs of loops that form links. Such structures should be not only limited to optical fields but will be present in all systems that can be modeled as random wave superpositions such as those found in cosmic strings and Bose-Einstein condensates. Also reported are results from experiments that generated compact vortex knots and links in real Gaussian beams. These results were achieved through the use of algebraic knot theory and random search optimisation algorithms. Finally, polarisation singularity densities are measured experimentally which confirm analytic predictions

    Maximizing the field of view and accuracy in 3D Single Molecule Localization Microscopy.

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    Super-resolution techniques that localize single molecules in three dimensions through point spread function (PSF) engineering are very sensitive to aberrations and optical alignment. Here we show how double-helix point spread function is affected by such mis-alignment and aberration. Specifically, we demonstrate through simulation and experiment how misplacement of phase masks in infinity corrected systems is a common source of significant loss of accuracy. We also describe an optimal alignment and calibration procedure to correct for these errors. In combination, these optimizations allow for a maximal field of view with high accuracy and precision. Though discussed with reference to double-helix point spread function (DHPSF), the optimization techniques are equally applicable to other engineered PSFs

    Reference Alloy Waste Form Fabrication and Initiation of Reducing Atmosphere and Reductive Additives Study on Alloy Waste Form Fabrication

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    This report describes the fabrication of two reference alloy waste forms, RAW-1(Re) and RAW-(Tc) using an optimized loading and heating method. The composition of the alloy materials was based on a generalized formulation to process various proposed feed streams resulting from the processing of used fuel. Waste elements are introduced into molten steel during alloy fabrication and, upon solidification, become incorporated into durable iron-based intermetallic phases of the alloy waste form. The first alloy ingot contained surrogate (non-radioactive), transition-metal fission products with rhenium acting as a surrogate for technetium. The second alloy ingot contained the same components as the first ingot, but included radioactive Tc-99 instead of rhenium. Understanding technetium behavior in the waste form is of particular importance due the longevity of Tc-99 and its mobility in the biosphere in the oxide form. RAW-1(Re) and RAW-1(Tc) are currently being used as test specimens in the comprehensive testing program investigating the corrosion and radionuclide release mechanisms of the representative alloy waste form. Also described in this report is the experimental plan to study the effects of reducing atmospheres and reducing additives to the alloy material during fabrication in an attempt to maximize the oxide content of waste streams that can be accommodated in the alloy waste form. Activities described in the experimental plan will be performed in FY12. The first aspect of the experimental plan is to study oxide formation on the alloy by introducing O2 impurities in the melt cover gas or from added oxide impurities in the feed materials. Reducing atmospheres will then be introduced to the melt cover gas in an attempt to minimize oxide formation during alloy fabrication. The second phase of the experimental plan is to investigate melting parameters associated with alloy fabrication to allow the separation of slag and alloy components of the melt

    Activation of the Notch Signaling Pathway In Vivo Elicits Changes in CSL Nuclear Dynamics.

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    A key feature of Notch signaling is that it directs immediate changes in transcription via the DNA-binding factor CSL, switching it from repression to activation. How Notch generates both a sensitive and accurate response-in the absence of any amplification step-remains to be elucidated. To address this question, we developed real-time analysis of CSL dynamics including single-molecule tracking in vivo. In Notch-OFF nuclei, a small proportion of CSL molecules transiently binds DNA, while in Notch-ON conditions CSL recruitment increases dramatically at target loci, where complexes have longer dwell times conferred by the Notch co-activator Mastermind. Surprisingly, recruitment of CSL-related corepressors also increases in Notch-ON conditions, revealing that Notch induces cooperative or "assisted" loading by promoting local increase in chromatin accessibility. Thus, in vivo Notch activity triggers changes in CSL dwell times and chromatin accessibility, which we propose confer sensitivity to small input changes and facilitate timely shut-down

    Accelerated Alpha Radiation Damage in a Ceramic Waste Form, Interim Results

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    Interim results are presented on the alpha-decay damage study of a {sup 238}Pu-loaded ceramic waste form (CWF). The waste form was developed to immobilize fission products and transuranic species accumulated from the electrometallurgical treatment of spent nuclear fuel. To evaluate the effects of {alpha}-decay damage on the waste form the {sup 238}Pu-loaded material was analyzed by (1) x-ray diffraction (XRD), (2) microstructure characterization by scanning electron microscopy (SEM) and transmission electron microscopy (TEM) with energy and wavelength dispersive spectroscopy (EDS/WDS) and electron diffraction, (3) bulk density measurements and (4) waste form durability, performed by the product consistency test (PCT). While the predominate phase of plutonium in the CWF, PuO{sub 2}, shows the expected unit cell expansion due to {alpha}-decay damage, currently no significant change has occurred to the macro- or microstructure of the material. The major phase of the waste form is sodalite and contains very little Pu, although the exact amount is unknown. Interestingly, measurement of the sodalite phase unit cell is also showing very slight expansion; again, presumably from {alpha}-decay damage

    ThX - a next-generation probe for the early detection of amyloid aggregates.

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    Neurodegenerative diseases such as Alzheimer's and Parkinson's are associated with protein misfolding and aggregation. Recent studies suggest that the small, rare and heterogeneous oligomeric species, formed early on in the aggregation process, may be a source of cytotoxicity. Thioflavin T (ThT) is currently the gold-standard fluorescent probe for the study of amyloid proteins and aggregation processes. However, the poor photophysical and binding properties of ThT impairs the study of oligomers. To overcome this challenge, we have designed Thioflavin X, (ThX), a next-generation fluorescent probe which displays superior properties; including a 5-fold increase in brightness and 7-fold increase in binding affinity to amyloidogenic proteins. As an extrinsic dye, this can be used to study unique structural amyloid features both in bulk and on a single-aggregate level. Furthermore, ThX can be used as a super-resolution imaging probe in single-molecule localisation microscopy. Finally, the improved optical properties (extinction coefficient, quantum yield and brightness) of ThX can be used to monitor structural differences in oligomeric species, not observed via traditional ThT imaging
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