Charakterisierung der transkriptionellen Regulation des humanen Period 1-Gens (hPER1) in vitro

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Increased APOBEC3G and APOBEC3F expression is associated with low viral load and prolonged survival in simian immunodeficiency virus infected rhesus monkeys

<p>Abstract</p> <p>Background</p> <p>The cytidine deaminases APOBEC3G (A3G) and APOBEC3F (A3F) are innate cellular factors that inhibit replication of a number of viruses, including HIV-1. Since antiviral activity of APOBEC3 has been mainly confirmed by <it>in vitro </it>data, we examined their role for disease progression in the SIV/macaque model for AIDS.</p> <p>Results</p> <p>We quantified A3G and A3F mRNA in PBMC and leukocyte subsets of uninfected and SIVmac-infected rhesus macaques. Compared with uninfected animals, we found increased A3G and A3F mRNA levels in PBMC, purified CD4+ T-cells and CD14+ monocytes as well as lymph node cells from asymptomatic SIV-infected macaques. APOBEC3 mRNA levels correlated negatively with plasma viral load, and highest amounts of APOBEC3 mRNA were detected in long term non-progressors (LTNPs). During acute viremia, A3G mRNA increased in parallel with MxA, a prototype interferon-stimulated gene indicating a common regulation by the initial interferon response. This association disappeared during the asymptomatic stage.</p> <p>Conclusion</p> <p>Our findings suggest a protective effect of APOBEC3 for HIV and SIV <it>in vivo </it>and indicate regulation of APOBEC3 by interferon during early infection and by contribution of other, hitherto undefined factors at later disease stages. Elucidating the regulatory mechanisms leading to increased APOBEC3 mRNA levels in LTNPs could help to develop new therapies against HIV.</p

Upregulation of miRNA hsa-miR-342-3p in experimental and idiopathic prion disease

The aim of our study was to analyze the differential expression of miRNAs in the brains of BSE-infected cynomolgus macaques as a model for Creutzfeldt-Jakob disease (CJD). MicroRNAs (miRNAs) are small noncoding RNAs regulating gene expression by mRNA targeting. Among other functions they contribute to neuronal development and survival. Recently, the lack of miRNA processing has been shown to promote neurodegeneration and deregulation of several miRNAs has been reported to be associated with Scrapie in mice. Therefore, we hypothesized that miRNAs are also regulated in response to human prion disease. We have applied miRNA-microarrays to identify deregulated miRNA candidates in brains of BSE-infected macaques. Shock-frozen brain sections of six BSE-infected and five non-infected macaques were used to validate regulated miRNA candidates by two independent qRT-PCR-based methods. Our study revealed significant upregulation of hsa-miR-342-3p and hsa-miR-494 in the brains of BSE-infected macaques compared to non-infected animals. In a pilot study we could show that hsa-miR-342-3p was also upregulated in brain samples of human type 1 and type 2 sporadic CJD. With respect to the reported regulation of this miRNA in Scrapie-infected mice, we propose that upregulation of hsa-miR-342-3p may be a general phenomenon in late stage prion disease and might be used as a novel marker for animal and human TSEs

Bovine spongiform encephalopathy infection alters endogenous retrovirus expression in distinct brain regions of cynomolgus macaques (Macaca fascicularis)

<p>Abstract</p> <p>Background</p> <p>Prion diseases such as bovine spongiform encephalopathies (BSE) are transmissible neurodegenerative diseases which are presumably caused by an infectious conformational isoform of the cellular prion protein. Previous work has provided evidence that in murine prion disease the endogenous retrovirus (ERV) expression is altered in the brain. To determine if prion-induced changes in ERV expression are a general phenomenon we used a non-human primate model for prion disease.</p> <p>Results</p> <p>Cynomolgus macaques (<it>Macaca fasicularis</it>) were infected intracerebrally with BSE-positive brain stem material from cattle and allowed to develop prion disease. Brain tissue from the <it>basis pontis </it>and <it>vermis cerebelli </it>of the six animals and the same regions from four healthy controls were subjected to ERV expression profiling using a retrovirus-specific microarray and quantitative real-time PCR. We could show that Class I gammaretroviruses HERV-E4-1, ERV-9, and MacERV-4 increase expression in BSE-infected macaques. In a second approach, we analysed ERV-K-(HML-2) RNA and protein expression in extracts from the same cynomolgus macaques. Here we found a significant downregulation of both, the macaque ERV-K-(HML-2) Gag protein and RNA in the frontal/parietal cortex of BSE-infected macaques.</p> <p>Conclusions</p> <p>We provide evidence that dysregulation of ERVs in response to BSE-infection can be detected on both, the RNA and the protein level. To our knowledge, this is the first report on the differential expression of ERV-derived structural proteins in prion disorders. Our findings suggest that endogenous retroviruses may induce or exacerbate the pathological consequences of prion-associated neurodegeneration.</p

Optimal coherent control of the molecular FWM response by arbitrarily shaped femtosecond pulses

Coherent control of quantum phenomena can be achieved by using phase- and amplitude modulated laser pulses. With a self-learning loop, which combines a femtosecond pulse shaper, an optimization algorithm and an experimental feedback signal, it is possible to automatically steer the interaction between system and electric field. This approach allows control even without any knowledge of the Hamiltonian. We have successfully implement this learning loop for the coherent control of the nonresonant two-photon excitation in sodium. New solutions for 'bright' and 'dark' pulses could be designed for this two-photon resonance without previous knowledge of the resonances. In a further experiment we combined the self-learning loop with degenerate four-wave-mixing spectroscopy in order to study the influence of phase and amplitude modulated pulses on the molecular FWM response of the prototype system K2. The obtained control pulses typically show a complex structure which hides the responsible physical mechanism. In order to extract the applied mechanism the concept of parameterization has been introduced which allows the learning algorithm to optimize already known control processes. Therefore the control of vibrational wavepacket motion in the electronic ground and excited state could be attributed to chirped pulse excitation, impulsive Raman excitation by pulse trains and phase-related double pulses representing the well-known Tannor-Rice-Kosloff control scheme

Asynchronous Onset of Clinical Disease in BSE-Infected Macaques

To estimate the effect of the variability of prion disease onset on primary bovine spongiform encephalopathy transmission to humans, we studied 6 cynomolgus macaques. The preclinical incubation period was significantly prolonged in 2 animals, implying that onset of variant Creutzfeldt-Jacob disease in humans could be more diverse than previously expected

Programmable amplitude- and phase-modulated femtosecond laser pulses in the mid-infrared

We present a scheme to produce programmable phase- and amplitude-modulated femtosecond laser pulses in the mid- infrared regime of 3-10 μm by difference frequency mixing. The 80-fs signal output of an optical parametric amplifier is shaped with a liquid-crystal mask and mixed in an AgGaS2 crystal with a temporally stretched idler pulse. Without changing the mechanical alignment, we produce programmable amplitude modulations and chirped pulses at λ = 3 μm with energy as high has thas 1 μJ. This scheme, further, allows the generation of controllable pulse sequences. The results are in good agreement with theoretical simulations. (C) 2002 Optical Society of America