Influence of diagenetic processes and terrestrial/anthropogenic sources in the REE contents of the Cascais submarine canyon (Iberian western coast)

ABSTRACT: Temporal variations of rare earth elements (REE) and their fractionation patterns, major elements, Pb and Hg were determined in two multicores collected at 445 and 2100 m water depth (mwd) in the Cascais submarine canyon (CSC). The PAAS-normalized REE patterns suggest mixing of Tagus estuarine and marine sediments, marked by MREE (Nd‐Dy series) enrichment and by positive Eu-anomaly, with marine sediments. The positive Eu/Eu* implies incorporation of detrital feldspar minerals derived from the estuary. Ce/Ce*, (La/Yb)PAAS and (Nd/Yb)PAAS show differences between the two cores. Core 252-35 from the shallower site is enriched in HREE (Ho‐Lu series) over LREE (La‐Pr series), a pattern also found in the Tagus estuary in the vicinity of an abandoned chemical complex, where the environment is affected by the legacy of massive-sulfide ores processing. There seems to be only limited down-canyon sediment transport to the deeper reaches where core 252-32 was collected. This deeper site shows Ce/Ce* peaks coinciding with low (La/Yb)PAAS values suggesting preferential diagenetic remobilization of LREE relative to HREE. Upcore Pb/Al and Hg/Corg trends observed in both cores indicate dispersion of the anthropogenic component from the estuary through the CSC, which is less obvious from the ∑REE/Al trends particularly in the deeper site. This may suggest the influence of diagenetic processes in the REE signal, associated with relatively low sediment accumulation rates.info:eu-repo/semantics/publishedVersio

Historical trends in Hg, Pb and Zn sedimentation in the central shelf area of Portugal

Temporal records of excess 210Pb, and the determination of major (Al and Ca) and trace elements (Zn, Cr, Ni, Pb, Cu and Hg) in two sediment box-cores, collected in the central area of the Portuguese shelf of North of the Nazaré canyon (offshore from the Lis River), allow evaluation of the deposition of various chemical elements normally associated with anthropogenic activities. In order to compensate for the natural sediment variability, heavy metal contents were normalised to Al. Temporal variations of Hg, Pb and Zn (Al-normalised) show an increasing trend since the beginning of the 1920’s, recording the development of industrial activities. Enrichment factors (EF) were calculated to estimate the level of contamination in these sediments. Mercury is the element with the highest average EF values (EF = 3), followed by Pb (EF = 1.5) and Zn (EF = 1.2). The results indicate that since 1991 64% of total Hg, 44% of total Pb and 24% of total Zn are derived from anthropogenic sources. The average anthropogenic fluxes of Hg, Pb and Zn (0.008, 3, 6 μg cm-2yr-1, respectively) for the last 40 years in a ca. 400 km2 deposition area represent a total accumulation of approximately 30, 12000 and 24400 kg per year of Hg, Pb and Zn, respectively. These results indicate that despite the high-energy conditions and the generally sandy nature of the Portuguese shelf sediments, it is possible to identify significant anthropogenic enrichments in some areas of sediment accumulation. These contaminants are not necessarily related to immediate sources but may instead indicate atmospheric and or marine transport from more distant sources.Los registros temporales del 210Pb en exceso, elementos mayores (Al y Ca), y elementos traza (Zn, Cr, Ni, Pb, Cu y Hg) de 2 box-cores procedentes de la plataforma continental al norte del cañón de Nazaré han permitido caracterizar depósitos de elementos químicos asociados a actividades antropogénicas. Los contenidos de metales pesados han sido normalizados con Al para compensar la variabilidad natural. La variación temporal de Hg, Pb y Zn, normalizados con Al, muestran un incremento desde el inicio de la década de 1920 reflejando el desarrollo de la actividad humana. El nivel de contaminación de los sedimentos ha sido calculado en base a Factores de Enriquecimiento (EF). Los valores medios más altos de FE son de mercurio (EF = 3), seguidos de plomo (EF = 1.5) y zinc (EF = 1.2). Los resultados obtenidos indican que a partir de 1991 el 64% del total de Hg, 44% del total de Pb y 24% del total de Zn son de origen antropogénico. La media para los últimos 40 años de los flujos de Hg, Pb y Zn (0.008, 3, 6 μg cm-2 año-1, respectivamente), en un área de deposición de aproximadamente 400 km2, se traduce en la acumulación de 30, 12000 y 24400 kg por año de Hg, Pb y Zn. Sin embargo, a pesar de las condiciones de alta energía y el carácter arenoso de los sedimentos de la plataforma continental portuguesa, se pueden identificar importantes enriquecimientos antropogénicos en depocentros de sedimentos, no relacionados con fuentes antropogénicas próximas pero que pueden indicar transporte marino y atmosférico de fuentes de contaminación distantes

Antisense locked nucleic acid gapmers to control Candida albicans filamentation

Whereas locked nucleic acid (LNA) has been extensively used to control gene expression, it has never been exploited to control Candida virulence genes. Thus, the main goal of this work was to compare the efficacy of five different LNA-based antisense oligonucleotides (ASO) with respect to the ability to control EFG1 gene expression, to modulate filamentation and to reduce C. albicans virulence. In vitro, all LNA-ASOs were able to significantly reduce C. albicans filamentation and to control EFG1 gene expression. Using the in vivo Galleria mellonella model, important differences among the five LNA-ASOs were revealed in terms of C. albicans virulence reduction. The inclusion of PS-linkage and palmitoyl-2-amino-LNA chemical modification in these five LNA gapmers proved to be the most promising combination, increasing the survival of G. mellonella by 40%. Our work confirms that LNA-ASOs are useful tools for research and therapeutic development in the candidiasis field.This study was supported by the Portuguese Foundation forScience and Technology (FCT) under the strategic funding of UIDB/04469/2020 unit and BioTecNorte operation (NORTE-01-0145-FEDER-000004) funded by the European RegionalDevelopment Fund under the scope of Norte2020-ProgramaOperacional Regional do Norte and Daniela Eira Araújo [SFRH/BD/121417/2016] PhD grant. The authors also acknowledge theproject funding by the“02/SAICT/2017–Projetos de Investiga-ção Científica e Desenvolvimento Tecnológico (IC&DT)–POCI-01-0145-FEDER-028893”. VILLUM Fonden is acknowledgedfor funding the Biomolecular Nano-scale Engineering Center(BioNEC), a Villum center of excellence, grant numberVKR18333. Funding received by iBB-Institute for Bioengineer-ing and Biosciences from FCT (UID/BIO/04565/2020) andPrograma Operacional Regional de Lisboa 2020 (Project No.007317) is also acknowledged. We acknowledge Dr. LucíliaGoreti Pinto, Life and Health Sciences Research Institute(ICVS), School of Medicine, University of Minho, forprocessing and sectioningG. mellonellatissue samples.The authors declare no conflict of interest.info:eu-repo/semantics/publishedVersio

Novel capsular depolymerases-based strategy to kill multidrug-resistant pathogenic bacteria

Multidrug resistant pathogens represent one of the greatest threats to human health of the new millennium. ESKAPE bacterial pathogens (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa and other Enterobacteriaceae species) are the leading group among these socalled superbugs, which rapidly acquire resistances to several (and sometimes all) available antibiotics and cause a variety of nosocomial infections (e.g. bacteraemia and wound infections). Our research has been leading an innovative approach based on bacteriophage-derived enzymes (called capsular depolymerases) against A. baumannii (see video at ref 1). Previously, we found that some bacteriophages (i.e. viruses that specifically infect bacteria) acquired the ability to infect different Acinetobacter hosts through acquisition of different capsular depolymerases (2). These enzymes located at the bacteriophage tails bind and degrade specific bacterial capsules types (2). Recently, recombinantly expressed capsular depolymerases showed to be active in several environment conditions, non-nontoxic to mammalian cells and able to make A. baumannii fully susceptible to host complement effect, namely in i) Galleria mellonella caterpillar, ii) murine and iii) human serum models (3, 4). A single intraperitoneal injection of depolymerase protect 60% of mice from dead, with significant reduction of proinflammatory cytokine profile (4). We show that capsular depolymerases fit the new trend of antimicrobials needed, as they are highly specific, stable and refractory to resistance as they do not kill bacteria per se, instead they remove bacterial surface polysaccharides, diminishing bacterial virulence and exposing them to the host immune system. This innovative antimicrobial approach can be applied to other pathogenic bacteria.info:eu-repo/semantics/publishedVersio

Do Klebsiella pneumoniae environmental strains maintain clinically relevant genomic and phenotypic traits?

info:eu-repo/semantics/publishedVersio

Submarine Cascais Canyon as a sediment conduit to the deep sea : comparison with adjacent slopes

Submarine canyons are known to be important conduits that trap, accumulate and deliver both natural and anthropogenic sediments from the shelf to the deep sea. Ten multi-cores from the Cascais Canyon and from the neighbour slopes (off Estremadura and Sines) were dated by 21Opb methodologies and analyzed for texture, major and trace metals to evaluate the role of submarine canyons in the transport of anthropogenic metals to the abyssal plains. Higher accumulation mass rates were determined in the upper Cascais Canyon than in the lower canyon and slopes. Enrichment factors (EF) were used to evaluate the level of metal enrichment in the studied areas. EF values exceeding natural background concentrations were obtained for Pb suggesting an anthropogenic and/or diagenetic source for Pb enrichment in the Cascais Canyon, but also, to a lesser extent, in the Estremadura and Sines slopes. Studies of provenance based on the ratio of different stable Pb isotopes can help to determinethe origin of such metal in the sediments

Alterações recentes nas razões isotópicas de Pb em sedimentos do Canhão Submarino de Cascais, Portugal

Temporal variations in lead concentrations and stable lead isotopic ratios in two sediment cores from the Cascais Canyon shows changes in sources of Pb during the last two centuries. The increase of total Pb contents wIth the evolution of Pb ratio recorded in both cores reveals the Increase of Pb from industrial sources. Nevertheless, this increase is lower in deeper core location (252-32) due to dilution and mixing with uncontaminated marine materials. An isotopic shift towards lower Pb/Pb in the shallower core (252-35) during the 1970s may reflect the increasing number of vehicles in the Lisboa area during that time

Erratum for Oliveira et al., "K2 Capsule Depolymerase Is Highly Stable, Is Refractory to Resistance, and Protects Larvae and Mice from Acinetobacter baumannii Sepsis"

Volume 85, no. 17, e00934-19, 2019, https://doi.org/10.1128/AEM.00934-19. Page 10, Acknowledgments, lines 4 and 5: POCI-01-0145-FEDER-016678 should read POCI-01-0145-FEDER-016643.info:eu-repo/semantics/publishedVersio

Controlling ETEC colonization on cultures of an intestinal pig cell line with a T4-like phage

Enterotoxigenic Escherichia coli (ETEC) colonizes the intestine of young pigs causing severe diarrhoea and consequently bringing high producing costs. The rise of antibiotic selective pressure together with on-going limitation on their use demands news strategies to tackle this pathology. The pertinence of using phages to tackle this problematic is being explored, and in this work, the efficacy of a T4-like phage vB_EcoM_FJ1 (FJ1) in reducing the load of ETEC O9:H9 (Sta, F5/F41) was assessed. FJ1 has a 170,053 bp genome, and of the 270 coding sequences none corresponds to identified undesirable proteins, such as integrases or transposases. Envisaging the oral application to piglets, FJ1 was previously encapsulated on CaCO3/alginate. Assays were performed on 15-day cultures of the intestinal pig cell line IPEC-1 seeded in transwell inserts. Phage treatment occurred 2 hours after ETEC infection, when, in average, 5x105 CFU.cm-2 were adhered to cultured cells. Encapsulated phage provided reductions of, approximately, 2.3 Log CFU.cm-2 and 2.8 Log CFU.cm-2 on adhered bacteria, respectively 3 and 6 hours after administration. The repeated exposure of the host to FJ1 led to the emergence of phage-insensitive mutants, phenotype that brought fitness costs to the host strain: they were 70% more vulnerable to the pig complement system and less efficient in adhering to cultured cells (in about 90%). Overall, FJ1 is presented here as promising to fight against ETEC infections through oral administration to piglets.info:eu-repo/semantics/publishedVersio

Cluster temporal de metales en un testigo corto de sedimento del Cañón Submarino de Cascais (Margen de Portugal)

The Cascais Canyon delivers contaminated sediments from the shelf to the deep marine environment. Multi-core PE252-32, located at 2100 m water depth in the canyon, records the latest 300 years of sedimentation. It was dated by 210Pb and analyzed texturally and geochemically for major elements and selected trace metals (Cu, Cr, Hg, Li, Ni, Pb and Zn). Cluster analysis performed on the down-core geochemical data identified four groups of variables related by grain-size, geochemical source and composition. Mercury, Pb and Zn were grouped in a cluster representing the anthropogenic component. Cluster analysis was applied again particularly to the latter cluster relatively to depth, in order to constrain the onset and temporal evolution of anthropogenic contamination. A second clustering, made on the basis of Hg, Pb and Zn, grouped samples by age and degree of anthropogenic contamination. One cluster contained relatively uncontaminated samples older than 1900 AD, and another cluster samples younger than 1900 AD with distinct metal enrichment. Maximum enrichments occurred during the early 1980s, followed by a slight recovery from the mid-1980s to the present. Mercury was the element with the highest enrichment factor (EFHg=5). Despite relatively low accumulation rates at this core location, our results show the importance of the Cascais Canyon as a transport route for contaminated sediments from the Tagus prodelta into the deep regions of the Portuguese Margin.El Cañón submarino de Cascais distribuye sedimentos contaminados de la plataforma continental al medio marino profundo. El testigo PE252-32, situado a 2100 metros de profundidad dentro del cañón, registra los últimos 300 años de su sedimentación. Se ha datado con 210Pb y ha sido analizada su granulometría, elementos mayoritarios y traza (cobre, cromo, mercurio, litio, níquel, plomo y zinc). Se ha llevado a cabo un análisis estadístico clúster, inicialmente aplicado a las series de datos geoquímicos en función de la profundidad, identificándose 4 grupos de variables, relacionados por la granulometría, procedencia y composición geoquímica. Los metales mercurio, plomo y zinc aparecen agrupados en un clúster que representa la componente antropogénica. A continuación el mismo análisis estadístico se aplicó específicamente a este grupo, en función de la profundidad, organizando las muestras según la edad de contaminación antropogénica. Como resultado las muestras quedan agrupadas en dos clústers principales, el de las muestras no contaminadas y más antiguas de 1900 AC, y el de las muestras más recientes de 1900 AC, marcando esta fecha el inicio de la contaminación por impacto de la actividad humana. Los máximos enriquecimientos ocurren durante el inicio de la década de los años ochenta, seguidos de un ligero descenso a partir de mediados de la misma década hasta la actualidad. De entre los demás, el mercurio es el elemento con el mayor grado de enriquecimiento (EFHg=5). Aunque la tasa de acumulación de sedimentos en este lugar es relativamente baja, los resultados obtenidos ponen en evidencia la importancia del Cañón submarino de Cascais como vía de transporte de sedimentos contaminados depositados en el pro-delta del Tajo a las regiones profundas del margen de Portugal