Evolutionary Effects of Irradiation in Cataclysmic Variables

The orbital evolution of cataclysmic variables in which the companion is illuminated by a fraction of the accretion luminosity consists of irradiation-driven limit cycles on thermal timescales, superimposed on a secular evolution toward shorter periods due to systemic angular momentum losses. We show that positive orbital period derivatives during bright phases are a natural consequence of the expansion of the companion during high mass transfer phases in the limit cycle. The irradiation instability may be enhanced by consequential angular momentum losses, CAML, accompanying the limit cycle. We investigate the secular evolution of cataclysmic binaries under the combined effects of irradiation and CAML and show that faster than secular transfer fluctuations that occur during these cycles can account for the observed dispersion in disk luminosities or estimated accretion rates at a given orbital period. If indeed irradiation-driven and CAML--assisted mass transfer fluctuations on timescales faster than secular occur, as discussed in this paper, then we may be able to predict the relative abundances of the different types of cataclysmic variable at a given orbital period. For example this mechanism may explain the relative paucity of dwarf novae with respect to nova-like variables between 3 and 4 hours.Comment: 35 pages, AAS LATEX macros v4.0, 16 postscript figures, Accepted for publication in the Astrophysical Journal; [email protected], [email protected]

Comment on: Diffusion through a slab

Mahan [J. Math. Phys. 36, 6758 (1995)] has calculated the transmission coefficient and angular distribution of particles which enter a thick slab at normal incidence and which diffuse in the slab with linear anisotropic, non-absorbing, scattering. Using orthogonality relations derived by McCormick & Kuscer [J. Math. Phys. 6, 1939 (1965); 7, 2036 (1966)] for the eigenfunctions of the problem, this calculation is generalised to a boundary condition with particle input at arbitrary angles. It is also shown how to use the orthogonality relations to relax in a simple way the restriction to a thick slab.Comment: 3 pages, LaTeX, uses RevTe

Tellipsoid: Exploiting inter-gene correlation for improved detection of differential gene expression

Motivation: Algorithms for differential analysis of microarray data are vital to modern biomedical research. Their accuracy strongly depends on effective treatment of inter-gene correlation. Correlation is ordinarily accounted for in terms of its effect on significance cut-offs. In this paper it is shown that correlation can, in fact, be exploited {to share information across tests}, which, in turn, can increase statistical power. Results: Vastly and demonstrably improved differential analysis approaches are the result of combining identifiability (the fact that in most microarray data sets, a large proportion of genes can be identified a priori as non-differential) with optimization criteria that incorporate correlation. As a special case, we develop a method which builds upon the widely used two-sample t-statistic based approach and uses the Mahalanobis distance as an optimality criterion. Results on the prostate cancer data of Singh et al. (2002) suggest that the proposed method outperforms all published approaches in terms of statistical power. Availability: The proposed algorithm is implemented in MATLAB and in R. The software, called Tellipsoid, and relevant data sets are available at http://www.egr.msu.edu/~desaikeyComment: 19 pages, Submitted to Bioinformatic

Hydrodynamic air lubricated compliant surface bearing for an automotive gas turbine engine. 1: Journal bearing performance

A 38.1 mm (1.5 inch) diameter Hydresil Compliant Surface Air Lubricated Journal Bearing was designed and tested to obtain bearing performance characteristics at both room temperature and 315 C (600 F). Testing was performed at various speeds up to 60,000 rpm with varying loads. Rotating sensors provided an opportunity to examine the film characteristics of the compliant surface bearing. In addition to providing minimum film thickness values and profiles, many other insights into bearing operation were gained such as the influence of bearing fabrication accuracy and the influence of smooth foil deflection between the bumps

Antarctic measurements of ozone, water vapor, and aerosol extinction by Sage 2 in the spring of 1987

Recent measurements of ozone, water vapor, and aerosol extinction from the spring of 1987 are presented and compared to 1985 and 1986. The observed changes to variations in meteorological conditions in the vortex for these three years are noted. March ozone data at similar latitudes for these three years will be used to investigate coupling between severity of the springtime depletion and early fall values. Researchers also investigate correlations between the measured species of water vapor, ozone, and aerosols throughout the vortex region

Current knowledge and recent advances in understanding metabolism of the model cyanobacterium Synechocystis sp. PCC 6803

Cyanobacteria are key organisms in the global ecosystem, useful models for studying metabolic and physiological processes conserved in photosynthetic organisms, and potential renewable platforms for production of chemicals. Characterising cyanobacterial metabolism and physiology is key to understanding their role in the environment and unlocking their potential for biotechnology applications. Many aspects of cyanobacterial biology differ from heterotrophic bacteria. For example, most cyanobacteria incorporate a series of internal thylakoid membranes where both oxygenic photosynthesis and respiration occur, while CO2 fixation takes place in specialised compartments termed carboxysomes. In this review, we provide a comprehensive summary of our knowledge on cyanobacterial physiology and the pathways in Synechocystis sp. PCC 6803 (Synechocystis) involved in biosynthesis of sugar-based metabolites, amino acids, nucleotides, lipids, cofactors, vitamins, isoprenoids, pigments and cell wall components, in addition to the proteins involved in metabolite transport. While some pathways are conserved between model cyanobacteria, such as Synechocystis, and model heterotrophic bacteria like Escherichia coli, many enzymes and/or pathways involved in the biosynthesis of key metabolites in cyanobacteria have not been completely characterised. These include pathways required for biosynthesis of chorismate and membrane lipids, nucleotides, several amino acids, vitamins and cofactors, and isoprenoids such as plastoquinone, carotenoids, and tocopherols. Moreover, our understanding of photorespiration, lipopolysaccharide assembly and transport, and degradation of lipids, sucrose, most vitamins and amino acids, and heme, is incomplete. We discuss tools that may aid characterisation of cyanobacterial metabolism, notably CyanoSource, a barcoded library of targeted Synechocystis mutants, which will significantly accelerate characterisation of individual proteins