Classical Radiation Reaction in Particle-In-Cell Simulations

Under the presence of ultra high intensity lasers or other intense electromagnetic fields the motion of particles in the ultrarelativistic regime can be severely affected by radiation reaction. The standard particle-in-cell (PIC) algorithms do not include radiation reaction effects. Even though this is a well known mechanism, there is not yet a definite algorithm nor a standard technique to include radiation reaction in PIC codes. We have compared several models for the calculation of the radiation reaction force, with the goal of implementing an algorithm for classical radiation reaction in the Osiris framework, a state-of-the-art PIC code. The results of the different models are compared with standard analytical results, and the relevance/advantages of each model are discussed. Numerical issues relevant to PIC codes such as resolution requirements, application of radiation reaction to macro particles and computational cost are also addressed. The Landau and Lifshitz reduced model is chosen for implementation.Comment: 12 pages, 8 figure

Full-scale ab initio 3D PIC simulations of an all-optical radiation reaction configuration at 1021W/cm210^{21}\mathrm{W/cm^2}

Using full-scale 3D particle-in-cell simulations we show that the radiation reaction dominated regime can be reached in an all optical configuration through the collision of a $\sim$1 GeV laser wakefield accelerated (LWFA) electron bunch with a counter propagating laser pulse. In this configuration radiation reaction significantly reduces the energy of the particle bunch, thus providing clear experimental signatures for the process with currently available lasers. We also show that the transition between classical and quantum radiation reaction could be investigated in the same configuration with laser intensities of $10^{24}\mathrm{W/cm^2}$

Particle Merging Algorithm for PIC Codes

Particle-in-cell merging algorithms aim to resample dynamically the six-dimensional phase space occupied by particles without distorting substantially the physical description of the system. Whereas various approaches have been proposed in previous works, none of them seemed to be able to conserve fully charge, momentum, energy and their associated distributions. We describe here an alternative algorithm based on the coalescence of N massive or massless particles, considered to be close enough in phase space, into two new macro-particles. The local conservation of charge, momentum and energy are ensured by the resolution of a system of scalar equations. Various simulation comparisons have been carried out with and without the merging algorithm, from classical plasma physics problems to extreme scenarios where quantum electrodynamics is taken into account, showing in addition to the conservation of local quantities, the good reproducibility of the particle distributions. In case where the number of particles ought to increase exponentially in the simulation box, the dynamical merging permits a considerable speedup, and significant memory savings that otherwise would make the simulations impossible to perform

Molecular gas and a new young stellar cluster in the far outer Galaxy

We investigate the star-formation ocurring in the region towards IRAS07527-3446 in the molecular cloud [MAB97]250.63-3.63, in the far outer Galaxy. We report the discovery of a new young stellar cluster, and describe its properties and those of its parent molecular cloud. Near-infrared JHKS images were obtained with VLT/ISAAC, and millimetre line CO spectra were obtained with the SEST telescope. VLA archive date were also used. The cloud and cluster are located at a distance of 10.3 kpc and a Galactocentric distance of 15.4 kpc, in the far outer Galaxy. Morphologically, IRAS 07527-3446 appears as a young embedded cluster of a few hundred stars seen towards the position of the IRAS source, extending for about 2-4 pc and exhibiting sub-clustering. The cluster contains low and intermediate-mass young reddened stars, a large fraction having cleared the inner regions of their circumstellar discs responsible for (H-Ks) colour excess. The observations are compatible with a < 5 Myr cluster with variable spatial extinction of between Av = 5 and Av = 11. Decomposition of CO emission in clumps, reveals a clump clearly associated with the cluster position, of mass 3.3 x 10^3 M(solar). Estimates of the slopes of the Ks-band luminosity function and of the star-formation efficiency yield values similar to those seen in nearby star-formation sites. These findings reinforce previous results that the distant outer Galaxy continues to be active in the production of new and rich stellar clusters, with the physical conditions required for the formation of rich clusters continuing to be met in the very distant environment of the outer Galactic disc.Comment: 11 pages, 13 figure

Improving positive and negative bias illumination stress stability in parylene passivated IGZO transistors

The impact of a parylene top-coating layer on the illumination and bias stress instabilities of indium-gallium-zinc oxide thin-film transistors (TFTs) is presented and discussed. The parylene coating substantially reduces the threshold voltage shift caused by continuous application of a gate bias and light exposure. The operational stability improves by 75%, and the light induced instability is reduced by 35%. The operational stability is quantified by fitting the threshold voltage shift with a stretched exponential model. Storage time as long as 7 months does not cause any measurable degradation on the electrical performance. It is proposed that parylene plays not only the role of an encapsulation layer but also of a defect passivation on the top semiconductor surface. It is also reported that depletion-mode TFTs are less sensitive to light induced instabilities. This is attributed to a defect neutralization process in the presence of free electrons. Published by AIP Publishing

Structural characterization and release profile of omega-3 fatty-acids encapsulated in nanoemulsions

Omega-3 (-3) fatty-acids are functional compounds with various benefits such as reduction of cardiovascular diseases. However, these fatty acids degrade quickly, present low water solubility and an unpleasant aroma, which make essential their encapsulation. The encapsulation (e.g. nanoemulsion production) process can change structural properties, which can affect the behavior of the system when applied to food matrices and within the gastrointestinal tract. The objective of this work was to characterize oil-in-water bio-based nanoemulsions with -3 using lactoferrin as a natural emulsifier, when submitted to different drying processes. Nanoemulsions were produced using high-pressure homogenization (5 cycles, 20,000 psi) using 2 % (w/w) lactoferrin and 5 % (w/w) -3. Nanoemulsions were dried by nanospray-drying (Nano Spray dryer B-90HP, Buchi) and freeze-drying methods. Physical and morphological properties were evaluated using dynamic light scattering (DLS) and transmission electron microscopy (TEM), respectively. Circular dichroism (CD) and FTIR-ATR were used to assess possible structural and chemical changes after dry treatments. Moreover, -3 release profile was studied in ethanol (20 % and 50 % (v/v)) at 25 ºC (simulation of food matrices) and at pH 7.4 and pH 2 at 37 ºC (simulation of different gastrointestinal phases). DLS results showed that original size (170 nm) and zeta-potential (+30 mV) of nanoemulsions was not achieved after nanospray-drying process probably caused by protein agglomeration. CD and FTIR-ATR results revealed lactoferrin structural modifications after drying processes as well as a reduction of -helix and -sheet content, being this effect more evident on nanospray-drying samples. FTIR-ATR results showed shifts of the amide I and amide II bands in both drying processes samples. At 20 % ethanol, -3 began to release after 48h which could allow nanoemulsions incorporation in food products such as ice cream and mayonnaise. This work provides useful information to design nanoemulsions aiming lipophilic compound encapsulation for food applications.info:eu-repo/semantics/publishedVersio

β-lactoglobulin micro- and nanostructures as bioactive compounds vehicle: In vitro studies

β-Lactoglobulin (β-Lg) is known to be capable to bind hydrophilic and hydrophobic bioactive compounds. This research aimed to assess the in vitro performance of β-Lg micro- (diameter ranging from 200 to 300 nm) and nano (diameter < 100 nm) structures associated to hydrophilic and hydrophobic model compounds on Caco-2 cells and under simulated gastrointestinal (GI) conditions. Riboflavin and quercetin were studied as hydrophilic and hydrophobic model compounds, respectively. Cytotoxicity experiment was conducted using in vitro cellular model based on human colon carcinoma Caco-2 cells. Moreover, the digestion process was simulated using the harmonized INFOGEST in vitro digestion model, where samples were taken at each phase of digestion process - oral, gastric and intestinal - and characterized in terms of particle size, polydispersity index (PDI), surface charge by dynamic light scattering (DLS); protein hydrolysis degree by 2,4,6-trinitrobenzene sulfonic acid (TNBSA) assay and native polyacrylamide gel electrophoresis; and bioactive compound concentration. Caco-2 cell viability was not affected up to 21 × 10−3 mg mL−1 of riboflavin and 16 × 10−3 mg mL−1 quercetin on β-Lg micro- and nanostructures. In the oral phase, β-Lg structures’ particle size, PDI and surface charge values were not changed comparing to the initial β-Lg structures (i.e., before being subjected to in vitro GI digestion). During gastric digestion, β-Lg structures were resistant to proteolytic enzymes and to acid environment of the stomach – confirmed by TNBSA and native gel electrophoresis. In vitro digestion results indicated that β-Lg micro- and nanostructures protected both hydrophilic and hydrophobic compounds from gastric conditions and deliver them to target site (i.e., intestinal phase). In addition, β-Lg structures were capable to enhance riboflavin and quercetin bioaccessibility and bioavailability potential compared to bioactive compounds in their free form. This study indicated that β-Lg micro- and nanostructures were capable to enhance hydrophilic and hydrophobic compounds bioavailability potential and they can be used as oral delivery systems.Livia de Souza Simoes gratefully acknowledges her grant to CNPq (Conselho Nacional de Desenvolvimento Cientifico e Tecnologico, Brasil) from Brazil. The authors also would like to acknowledge Luis Abrunhosa, from Centre of Biological Engineering, for assistance in High Pressure Liquid Chromatography -Fluorescence detection. This study was supported by FCT under the scope of the strategic funding of UID/BIO/04469/2013 unit and COMPETE 2020 (POCI-01-0145-FEDER-006684) and BioTecNorte operation (NORTE-01-0145-FEDER-000004) funded by the European Regional Development Fund under the scope of Norte2020 - Programa Operacional Regional do Norte. This study was also supported by FCT under the scope of the Project RECI/BBB-EBI/0179/2012 (FCOMP-01-0124-FEDER-027462).info:eu-repo/semantics/publishedVersio

The social network analysis of Switzerland football team on FIFA World Cup 2014

The aim of this study was to apply the social network analysis approach to the football match analysis case. For such, it was analyzed the Switzerland national football team during the FIFA World Cup 2014 tournament. Two general network metrics (total links and network density) and two centrality metrics (degree centrality and degree prestige) were computed. Four matches from Switzerland in FIFA World Cup 2014 were analysed in this study. A total of 334 adjacency matrices corresponding to 334 units of attack were generated based on the teammates’ interactions and then converted in 4 network graphs. A total of 1129 passes were analysed. The greatest value of total links and network density was achieved in the first match (88 total links and 0.80 of density value). Degree centrality revealed that the defenders and midfielders were the players with greatest prominent values in the attacking building. Degree prestige showed that midfielders were the main targets of the team to pass the ball in the attacking process. In summary, this study showed that centrality metrics can be an important tool in match analysis to identify the style of play of football teams, revealing the most prominent tactical roles in the attacking process.info:eu-repo/semantics/publishedVersio

Distribution patterns of benthic bacteria and nematode communities in estuarine sediments

Benthic organisms are crucial in the regulation of the ecosystem functions. The interactions between benthic nematodes and sediment bacteria across divergent environmental conditions are poorly understood. The main goal of this study was to understand the spatial distribution patterns and diversity of benthic bacterial com- munities and nematode assemblages of the intertidal sediments in three sampling sites (Navigator, Tro ́ia and Moinho) along Sado Estuary (SW, Portugal). Bacterial communities were described using a 16S metagenomic approach, while nematode assemblages were characterized using morphological identification. Overall, bacterial and nematode communities presented significant diversity between sites (p < 0.05), which is primarily related with the environmental variables (e.g., organic matter and percentage of gravel). The spatial distribution of bacterial communities was in accordance with the ecological conditions of three selected sites at a larger scale than nematode assemblages. Previously described as good ecological indicators, nematode assemblages were separated at sampling site level, suggesting that their response is driven by within site specific factors at a smaller scale. Hence, the present study set a fundamental ground for future research on functional interactions between bacteria and nematodes