180 research outputs found
Puukohola Heiau National Historic Site plant survey
Reports were scanned in black and white at a resolution of 600 dots per inch and were converted to text using Adobe Paper Capture Plug-in.A checklist of all plant species located within the Puukohola Heiau National Historic Site was compiled for the dry season during May 1975, and for the wet season in March 1976. A total of 50 species from 21 Angiosperm families were recorded along with 2 ferns and 1 Basidiomycete. Of the total number of species collected, 38 were introductions, 10 were indigenous, and 5 were endemic. Among the species present are Ophioglossum concinnum, a fern proposed for rare and endangered status, and an unknown
species of Atriplex, provisionally identified as A. johnstonii. Four distinct communities were recognized: a xerophytic
scrub savannah, a closed kiawe forest, a halophytic scrub, and a disturbed roadside community. Recommendations are made concerning a potential fire hazard, the control of two noxious weeds, and the preservation of the rare fern.National Park Service Contract No. CX 8000 6 003
A Limousin Specific Myostatin Allele Affects Longissimus Muscle Area and Fatty Acid Profiles in a Wagyu-Limousin F2 Population
A microsatellite-based genome scan of a Wagyu x Limousin F(2) cross population previously demonstrated QTL affecting LM area and fatty acid composition were present in regions near the centromere of BTA2. In this study, we used 70 SNP markers to examine the centromeric 24 megabases (Mb) of BTA2, including the Limousin-specific F94L myostatin allele (AB076403.1; 415C \u3e A) located at approximately 6 Mb on the draft genome sequence of BTA2. A significant effect of the F94L marker was observed (F = 60.17) for LM area, which indicated that myostatin is most likely responsible for the effect. This is consistent with previous reports that the substitution of Leu for Phe at AA 94 of myostatin (caused by the 415C \u3e A transversion) is associated with increased muscle growth. Surprisingly, several fatty acid trait QTL, which affected the amount of unsaturated fats, also mapped to or very near the myostatin marker, including the ratio of C16:1 MUFA to C16:0 saturated fat (F = 16.72), C18:1 to C18:0 (F = 18.88), and total content of MUFA (F = 17.12). In addition, QTL for extent of marbling (F = 14.73) approached significance (P = 0.05), and CLA concentration (F = 9.22) was marginally significant (P = 0.18). We also observed associations of SNP located at 16.3 Mb with KPH (F = 15.00) and for the amount of SFA (F = 12.01). These results provide insight into genetic differences between the Wagyu and Limousin breeds and may lead to a better tasting and healthier product for consumers through improved selection for lipid content of beef
Single Nucleotide Polymorphism Effects on Lamb Fecal Egg Count Estimated Breeding Values in Progeny-Tested Katahdin Sires
Publication history: Accepted - 14 April 2022; Published - 3 May 2022.Estimated breeding values (EBV) for fecal egg counts (FEC) at 42–90 days of age (WFEC) and
91–150 days of age (PFEC) for 84 progeny-tested Katahdin sires were used to identify
associations of deregressed EBV with single-nucleotide polymorphisms (SNP) using 388,000
SNP with minor-allele frequencies ≥0.10 on an Illumina high-density ovine array. Associations
betweenmarkers and FEC EBVwere initially quantified by single-SNP linear regression. Effects
of linkage disequilibrium (LD) were minimized by assigning SNP to 2,535 consecutive 1-Mb
bins and focusing on the effect of the most significant SNP in each bin. Bonferroni correction
was used to define bin-based (BB) genome- and chromosome-wide significance. Six bins on
chromosome 5 achieved BB genome-wide significance for PFEC EBV, and three of those
SNP achieved chromosome-wide significance after Bonferroni correction based on the
14,530 total SNP on chromosome 5. These bins were nested within 12 consecutive bins
between 59 and 71 Mb on chromosome 5 that reached BB chromosome-wide significance.
The largest SNP effects were at 63, 67, and 70Mb, with LD among these SNP of r2 ≤ 0.2.
Regional heritability mapping (RHM) was then used to evaluate the ability of different genomic
regions to account for additive variance in FEC EBV. Chromosome-level RHM indicated that
one 500-SNP window between 65.9 and 69.9Mb accounted for significant variation in PFEC
EBV. Five additional 500-SNP windows between 59.3 and 71.6 Mb reached suggestive (p <
0.10) significance for PFEC EBV. Although previous studies rarely identified markers for
parasite resistance on chromosome 5, the IL12B gene at 68.5 Mbcodes for the p40 subunit of
both interleukins 12 and 23. Other immunoregulatory genes are also located in this region of
chromosome 5, providing opportunity for additive or associative effects.This research was funded by the USDA NIFA Organic
Agriculture Research and Extension Initiative grants no. 2016-
51300-25723 and 2010-51300-21641, and USDA Southern SARE
grant no. LS08-204
Bringing 'place' back in: regional clusters, project governance, and new product outcomes
We examine new product outcomes in the context of regional clusters. Based on past research on marketing relationships, clusters, and social networks, we propose that the overall configuration of a cluster helps promote particular governance practices among its members. These practices have distinct value-creating properties, and when they are brought to bear on a specific new product development project within a cluster, they promote performance outcomes like product novelty and speed to market. Ultimately, these performance effects are reinforced by the configuration of the cluster itself. In general, we propose that new product outcomes follow from complex interactions between a cluster's macro-level configuration and its micro-level governance processes. More broadly, our framework points to the importance of geographical variables and to the role of “place” in marketing decision-making
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Time-resolved Soft X-Ray Imaging (SXRI) diagnostic for use at the NIF and OMEGA lasers
The soft x-ray imager (SXRI) built for the first experiments at the National Ignition Facility (NIF) has four soft x-ray channels and one hard x-ray channel. The SXRI is a snout that mounts to a four strip gated imager. This produces four soft x-ray images per strip, which can be separated in time by {approx}60psec. Each soft x-ray channel consists of a mirror plus a filter. The diagnostic was used to study x-ray burnthrough of hot hohlraum targets at the NIF and OMEGA lasers. The SXRI snout design and issues involved in selecting the desired soft x-ray channels are discussed
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Time-resolved Soft X-Ray Imaging (SXRI) diagnostic for use at the NIF and OMEGA lasers (version 2)
The soft x-ray imager (SXRI) built for the first experiments at the National Ignition Facility (NIF) has four soft x-ray channels and one hard x-ray channel. The SXRI is a snout that mounts to a four strip gated imager. This produces four soft x-ray images per strip, which can be separated in time by {approx}60psec. Each soft x-ray channel consists of a mirror plus a filter. The diagnostic was used to study x-ray burnthrough of hot hohlraum targets at the NIF and OMEGA lasers. The SXRI snout design and issues involved in selecting the desired soft x-ray channels are discussed
The Genomic and Evolutionary Landscapes of Anaplastic Thyroid Carcinoma
Anaplastic thyroid carcinoma is arguably the most lethal human malignancy. It often co-occurs with differentiated thyroid cancers, yet the molecular origins of its aggressivity are unknown. We sequenced tumor DNA from 329 regions of thyroid cancer, including 213 from patients with primary anaplastic thyroid carcinomas. We also whole genome sequenced 9 patients using multi-region sequencing of both differentiated and anaplastic thyroid cancer components. Using these data, we demonstrate thatanaplastic thyroid carcinomas have a higher burden of mutations than other thyroid cancers, with distinct mutational signatures and molecular subtypes. Further, different cancer driver genes are mutated in anaplastic and differentiated thyroid carcinomas, even those arising in a single patient. Finally, we unambiguously demonstrate that anaplastic thyroid carcinomas share a genomic origin with co-occurring differentiated carcinomas and emerge from a common malignant field through acquisition of characteristic clonal driver mutations
Global wealth disparities drive adherence to COVID-safe pathways in head and neck cancer surgery
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