University libraries as active agents for change. The BitViews Project : how University librarians can turn all journals green and clear the path to open science

There can be no open science without Open Access (OA). This paper is a call to arms to individual University librarians to make a decisive move towards open access. The short-term objective of OA is defined as the immediate, cost-free, online access to the content of all peer reviewed scientific, medical, and scholarly articles. This amounts to unrestricted access to the author’s approved manuscripts (AAMs) deposited in institutional and other repositories. Even in the current academic publishing ecosystem, largely directed and managed by a few oligopolistic commercial publishers, 80% of peer reviewed articles can be deposited as AAMs, but only a small minority of researchers choose to do so. The reason for this failure is that currently there are no individual incentives for researchers to promote their AAMs, as the main currency of academic recognition and esteem (the citation count) resides with published articles. The author has described elsewhere how an open-source blockchain application (BitViews) can collect, validate, and disseminate at minimal cost online usage data of all AAMs available on institutional repositories. The resulting public ledger of usage data can be used to arrange discipline-specific non-citation research impact measures thereby providing the incentive for more authors to deposit their AAMs in a virtuous circle. The green OA thus achieved allows researchers in the global South to enter scholarly communication not only as consumers but also as producers of peer-reviewed knowledge. BitViews Project allows individual university libraries to be catalysts for change. The paper explains how a novel application of game theory (conditional crowdfunding) will empower individual libraries to spread the relatively miniscule costs of setting up BitViews using a two-stage mechanism that minimises free-riding and offers a no-risk opportunity to libraries to deploy their institutional repositories not just as stores of information, but as active tools to achieve open access.Publisher PD

Performance evaluation of Attribute-Based Encryption on constrained IoT devices

The Internet of Things (IoT) is enabling a new generation of innovative services based on the seamless integration of smart objects into information systems. This raises new security and privacy challenges that require novel cryptographic methods. Attribute-Based Encryption (ABE) is a type of public-key encryption that enforces a fine-grained access control on encrypted data based on flexible access policies. The feasibility of ABE adoption in fully-fledged computing systems, i.e., smartphones or embedded systems, has been demonstrated in recent works. In this paper, we consider IoT devices characterized by strong limitations in terms of computing, storage, and power. Specifically, we assess the performance of ABE in typical IoT constrained devices. We evaluate the performance of three representative ABE schemes configured considering the worst-case scenario on two popular IoT platforms, namely ESP32 and RE-Mote. Our results show that, if we assume to employ up to 10 attributes in ciphertexts and to leverage hardware cryptographic acceleration, then ABE can indeed be adopted on devices with very limited memory and computing power, while obtaining a satisfactory battery lifetime. In our experiments, as also performed in other works in the literature, we consider only the worst-case configuration, which, however, might not be completely representative of the real working conditions of sensors employing ABE. For this reason, we complete our evaluation by proposing a novel benchmark method that we used to complement the experiments by evaluating the average performance. We show that by always considering the worst case, the current literature significantly overestimates the processing time and the energy consumption

Mycobacterium tuberculosis Drives Expansion of Low-Density Neutrophils Equipped With Regulatory Activities

In human tuberculosis (TB) neutrophils represent the most commonly infected phagocyte but their role in protection and pathology is highly contradictory. Moreover, a subset of low-density neutrophils (LDNs) has been identified in TB, but their functions remain unclear. Here, we have analyzed total neutrophils and their low-density and normal-density (NDNs) subsets in patients with active TB disease, in terms of frequency, phenotype, functional features, and gene expression signature. Full-blood counts from Healthy Donors (H.D.), Latent TB infected, active TB, and cured TB patients were performed. Frequency, phenotype, burst activity, and suppressor T cell activity of the two different subsets were assessed by flow cytometry while NETosis and phagocytosis were evaluated by confocal microscopy. Expression analysis was performed by using the semi-quantitative RT-PCR array technology. Elevated numbers of total neutrophils and a high neutrophil/lymphocyte ratio distinguished patients with active TB from all the other groups. PBMCs of patients with active TB disease contained elevated percentages of LDNs compared with those of H.D., with an increased expression of CD66b, CD33, CD15, and CD16 compared to NDNs. Transcriptomic analysis of LDNs and NDNs purified from the peripheral blood of TB patients identified 12 genes differentially expressed: CCL5, CCR5, CD4, IL10, LYZ, and STAT4 were upregulated, while CXCL8, IFNAR1, NFKB1A, STAT1, TICAM1, and TNF were downregulated in LDNs, as compared to NDNs. Differently than NDNs, LDNs failed to phagocyte live Mycobacterium tuberculosis (M. tuberculosis) bacilli, to make oxidative burst and NETosis, but caused significant suppression of antigen-specific and polyclonal T cell proliferation which was partially mediated by IL-10. These insights add a little dowel of knowledge in understanding the pathogenesis of human TB

Renal Toxicities in Cancer Patients Receiving Immune-Checkpoint Inhibitors: A Meta-Analysis

Aim: We performed a meta-analysis of the available clinical trials of immune-checkpoint inhibitors to assess risk differences and relative risks of renal toxicity. Methods: 17 randomized phase III studies were selected, including 10,252 patients. Results: The administration of immune-checkpoint inhibitors resulted in an overall low-grade, high-grade and all-grade renal toxicity Risk Difference of: 0.746% (95% CI 0.629% to 1.15%, p < 0.001—random), 0.61% (95% CI, 0.292–0.929%, p < 0.001—fixed) and 1.2% (95% CI, 0.601–1.85%—random), respectively. The pooled Relative Risk of low-grade, high-grade and all-grade renal toxicity was: 2.185 (95% CI 1.515–3.152—fixed), 2.610 (95% CI, 1.409–4.833, p = 0.002—fixed) and 2.473 (95% CI, 1.782–3.431, p < 0.001—fixed), respectively. An increased risk of renal toxicity was evident in some subgroups more than others. Conclusion: Immune-checkpoint inhibitors are associated with an increased risk of renal toxicity

Kidney transplantation with presymptomatic COVID-19–positive surgeon

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Study of a high spatial resolution 10B-based thermal neutron detector for application in neutron reflectometry: the Multi-Blade prototype

Although for large area detectors it is crucial to find an alternative to detect thermal neutrons because of the 3He shortage, this is not the case for small area detectors. Neutron scattering science is still growing its instruments' power and the neutron flux a detector must tolerate is increasing. For small area detectors the main effort is to expand the detectors' performances. At Institut Laue-Langevin (ILL) we developed the Multi-Blade detector which wants to increase the spatial resolution of 3He-based detectors for high flux applications. We developed a high spatial resolution prototype suitable for neutron reflectometry instruments. It exploits solid 10B-films employed in a proportional gas chamber. Two prototypes have been constructed at ILL and the results obtained on our monochromatic test beam line are presented here

The fundamental problem blocking open access and how to overcome it : the BitViews project

In our view the fundamental obstacle to open access (OA) is the lack of any incentive-based mechanism that unbundles authors’ accepted manuscripts (AMs) from articles (VoRs). The former can be seen as the public good that ought to be openly accessible, whereas the latter is owned by publishers and rightly paywall-restricted. We propose one such mechanism to overcome this obstacle: BitViews. BitViews is a blockchain-based application that aims to revolutionize the OA publishing ecosystem. Currently, the main academic currency of value is the citation. There have been attempts in the past to create a second currency whose measure is the online usage of research materials (e.g., PIRUS). However, these have failed due to two problems. Firstly, it has been impossible to find a single agency willing to co-ordinate and fund the validation and collation of global online usage data. Secondly, online usage metrics have lacked transparency in how they filter non-human online activity. BitViews is a novel solution which uses blockchain technology to bypass both problems: online AM usage will be recorded on a public, distributed ledger, obviating the need for a central responsible agency, and the rules governing activity-filtering will be part of the open-source BitViews blockchain application, creating complete transparency. Once online AM usage has measurable value, researchers will be incentivized to promote and disseminate AMs. This will fundamentally re-orient the academic publishing ecosystem. A key feature of BitViews is that its success (or failure) is wholly and exclusively in the hands of the worldwide community of university and research libraries, as we suggest that it ought to be financed by conditional crowdfunding, whereby the actual financial commitment of each contributing library depends on the total amount raised. If the financing target is not reached, then all contributions are returned in full and if the target is over-fulfilled, then the surplus is returned pro rata.Publisher PDFPeer reviewe

Monitoring the habitat use of common Bottlenose Dolphins (Tursiops truncatus) using passive acoustics in a Mediterranean marine protected area

The Mediterranean Tursiops truncatus subpopulation has been classified as Vulnerable on the IUCN Red List because of its decline. This species in coastal areas is exposed to a wide variety of threats: directed kills, bycatch, reduced prey availability caused by environmental degradation and overfishing, habitat degradation including disturbances from boat traffic and noise. Despite the increase in boat traffic in the Mediterranean Sea, the effect on T. truncatus' habitat use has been studied in little detail and few data have been published. This study represents the first attempt to characterise spatial and temporal habitat use by T. truncatus and its relation to boat traffic in the Isole Pelagie Marine Protected Area (Italy) on the basis of an originally developed passive acoustic monitoring system (PAM). The devices were deployed in 2 areas in the southern waters of Lampedusa, during 2 separate years (2006 and 2009), each time for 3 months (from July to September) and in 6 time slots (3 diurnal and 3 nocturnal). Acoustic analysis showed that T. truncatus used the Southern coastal area of Lampedusa independently of the year, primarily during the early summer, a period coinciding with the peak of calving season. Dolphin occurrences appeared independent of boat traffic, with the exception of the smallest temporal scale (time slots): dolphin occurrences were more prevalent during the night when the level of boat traffic was lower. This study provides evidence on T. truncatus habitat use in the Mediterranean Sea and reveals that boat traffic could be one of the factors influencing it, thus stressing the need for further detailed investigation regarding this topic