Thermodynamic Geometry of Nambu -- Jona Lasinio model

The formalism of Riemannian geometry is applied to study the phase transitions in Nambu -Jona Lasinio (NJL) model. Thermodynamic geometry reliably describes the phase diagram, both in the chiral limit and for finite quark masses. The comparison between the geometrical study of NJL model and of (2+1) Quantum Chromodynamics at high temperature and small baryon density shows a clear connection between chiral symmetry restoration/breaking and deconfinement/confinement regimes

Stabilization in relation to wavenumber in HDG methods

Simulation of wave propagation through complex media relies on proper understanding of the properties of numerical methods when the wavenumber is real and complex. Numerical methods of the Hybrid Discontinuous Galerkin (HDG) type are considered for simulating waves that satisfy the Helmholtz and Maxwell equations. It is shown that these methods, when wrongly used, give rise to singular systems for complex wavenumbers. A sufficient condition on the HDG stabilization parameter for guaranteeing unique solvability of the numerical HDG system, both for Helmholtz and Maxwell systems, is obtained for complex wavenumbers. For real wavenumbers, results from a dispersion analysis are presented. An asymptotic expansion of the dispersion relation, as the number of mesh elements per wave increase, reveal that some choices of the stabilization parameter are better than others. To summarize the findings, there are values of the HDG stabilization parameter that will cause the HDG method to fail for complex wavenumbers. However, this failure is remedied if the real part of the stabilization parameter has the opposite sign of the imaginary part of the wavenumber. When the wavenumber is real, values of the stabilization parameter that asymptotically minimize the HDG wavenumber errors are found on the imaginary axis. Finally, a dispersion analysis of the mixed hybrid Raviart-Thomas method showed that its wavenumber errors are an order smaller than those of the HDG method

Hybrid MIMD/SIMD High Order DGTD Solver for the Numerical Modeling of Light/Matter Interaction on the Nanoscale

This paper is concerned with the development of a scalable high order finite element type solver for the numerical modeling of light interaction with nanometer scale structures. From the mathematical modeling point of view, one has to deal with the differential system of Maxwell equations in the time domain, coupled to an appropriate differential model of the behavior of the underlying material (which can be a dielectric and/or a metal) at optical frequencies. For the numerical solution of the resulting system of differential equations, we have designed a high order DGTD (Discontinuous Galerkin Time-Domain) solver that has been adapted to hybrid MIMD/SIMD computing. Here we discuss about this later aspect and report on preliminary performance results on the Curie system of the PRACE research infrastructure

Deconfinement transition effects on cosmological parameters and primordial gravitational waves spectrum

The cosmological evolution can be described in terms of directly measurable cosmological scalar parameters (deceleration q, jerk j, snap s, etc⋯) constructed out of high order derivatives of the scale factor. Their behavior at the critical temperature of the quantum chromodynamics (QCD) phase transition in early universe could be a specific tool to study the transition, analogously to the fluctuations of conserved charges in QCD. We analyze the effect of the crossover transition from quarks and gluons to hadrons in early universe on the cosmological scalars and on the gravitational wave spectrum, by using the recent lattice QCD equation of state and including the electroweak degrees of freedom. Near the transition the cosmological parameters follow the behavior of QCD trace anomaly and of the speed of sound of the entire system. The effects of deconfinement turn out to be more relevant for the modification of the primordial spectrum of gravitational waves rather than for the evolution of the cosmological parameters. Our complete analysis, based on lattice QCD simulations and on the hadron resonance gas below the critical temperature, refines previous results

Isolation and mapping of a C3'H gene (CYP98A49) from globe artichoke, and its expression upon UV-C stress

Globe artichoke represents a natural source of phenolic compounds with dicaffeoylquinic acids along with their biosynthetic precursor chlorogenic acid (5-caffeoylquinic acid) as the predominant molecules. We report the isolation and characterization of a full-length cDNA and promoter of a globe artichoke p-coumaroyl ester 3¿-hydroxylase (CYP98A49), which is involved in both chlorogenic acid and lignin biosynthesis. Phylogenetic analyses demonstrated that this gene belongs to the CYP98 family. CYP98A49 was also heterologously expressed in yeast, in order to perform an enzymatic assay with p-coumaroylshikimate and p-coumaroylquinate as substrates. Real Time quantitative PCR analysis revealed that CYP98A49 expression is induced upon exposure to UV-C radiation. A single nucleotide polymorphism in the CYP98A49 gene sequence of two globe artichoke varieties used for genetic mapping allowed the localization of this gene to linkage group 10 within the previously developed map

Optical variability of the BL Lacertae object GC 0109+224. Multiband behaviour and time scales from a 7-years monitoring campaign

We present the most continuous data base of optical $BVR_{c}I_{c}$ observations ever published on the BL Lacertae object GC 0109+224, collected mainly by the robotic telescope of the Perugia University Observatory in the period November 1994-February 2002. These observations have been complemented by data from the Torino Observatory, collected in the period July 1995-January 1999, and Mt. Maidanak Observatory (December 2000). GC 0109+224 showed rapid optical variations and six major outbursts were observed at the beginning and end of 1996, in fall 1998, at the beginning and at the end of 2000, and at the beginning of 2002. Fast and large-amplitude drops characterized its flux behaviour. The $R_c$ magnitude ranged from 13.3 (16.16 mJy) to 16.46 (0.8 mJy), with a mean value of 14.9 (3.38 mJy). In the periods where we collected multi-filter observations, we analyzed colour and spectral indexes, and the variability patterns during some flares. The long-term behaviour seems approximatively achromatic, but during some isolated outbursts we found evidence of the typical loop-like hysteresis behaviour, suggesting that rapid optical variability is dominated by non-thermal cooling of a single emitting particle population. We performed also a statistical analysis of the data, through the discrete correlation function (DCF), the structure function (SF), and the Lomb-Scargle periodogram, to identify characteristic times scales, from days to months, in the light curves, and to quantify the mode of variability. We also include the reconstruction of the historical light curve and a photometric calibration of comparison stars, to favour further extensive optical monitoring of this interesting blazar.Comment: 13 pages, 11 PS figures, 1 EPS figure, 3 tables, accepted by Astronomy and Astrophysics. Uses A&A documentclass aa.cls, and the package graphicx.st

A postprocessing technique for a discontinuous Galerkin discretization of time-dependent Maxwell's equations

We present a novel postprocessing technique for a discontinuous Galerkin (DG) discretization of time-dependent Maxwell's equations that we couple with an explicit Runge-Kutta time-marching scheme. The postprocessed electromagnetic field converges one order faster than the unprocessed solution in the H(curl)-norm. The proposed approach is local, in the sense that the enhanced solution is computed independently in each cell of the computational mesh, and at each time step of interest. As a result, it is inexpensive to compute, especially if the region of interest is localized, either in time or space. The key ideas behind this postprocessing technique stem from hybridizable discontinuous Galerkin (HDG) methods, which are equivalent to the analyzed DG scheme for specific choices of penalization parameters. We present several numerical experiments that highlight the superconvergence properties of the postprocessed electromagnetic field approximation

Mito-nuclear genetic comparison in a Wolbachia infected weevil: insights on reproductive mode, infection age and evolutionary forces shaping genetic variation

<p>Abstract</p> <p>Background</p> <p>Maternally inherited endosymbionts like <it>Wolbachia pipientis </it>are in linkage disequilibrium with the mtDNA of their hosts. Therefore, they can induce selective sweeps, decreasing genetic diversity over many generations. This sex ratio distorter, that is involved in the origin of parthenogenesis and other reproductive alterations, infects the parthenogenetic weevil <it>Naupactus cervinus</it>, a serious pest of ornamental and fruit plants.</p> <p>Results</p> <p>Molecular evolution analyses of mitochondrial (<it>COI</it>) and nuclear (<it>ITS1</it>) sequences from 309 individuals of <it>Naupactus cervinus </it>sampled over a broad range of its geographical distribution were carried out. Our results demonstrate lack of recombination in the nuclear fragment, non-random association between nuclear and mitochondrial genomes and the consequent coevolution of both genomes, being an indirect evidence of apomixis. This weevil is infected by a single <it>Wolbachia </it>strain, which could have caused a moderate bottleneck in the invaded population which survived the initial infection.</p> <p>Conclusions</p> <p>Clonal reproduction and <it>Wolbachia </it>infection induce the coevolution of bacterial, mitochondrial and nuclear genomes. The time elapsed since the <it>Wolbachia </it>invasion would have erased the traces of the demographic crash in the mtDNA, being the nuclear genome the only one that retained the signal of the bottleneck. The amount of genetic change accumulated in the mtDNA and the high prevalence of <it>Wolbachia </it>in all populations of <it>N. cervinus </it>agree with the hypothesis of an ancient infection. <it>Wolbachia </it>probably had great influence in shaping the genetic diversity of <it>N. cervinus</it>. However, it would have not caused the extinction of males, since sexual and asexual infected lineages coexisted until recent times.</p