Three new diatom species from spring habitats in the northern apennines (Emilia-Romagna, Italy)

Using light (LM, including plastid characterization on fresh material) and scanning electron microscopy (SEM), as well as a thorough morphological, physical, chemical, and biological characterization of the habitats, the present study aims at describing three species new to science. They belong to the genera Eunotia Ehrenb., Planothidium Round and L. Bukht., and Delicatophycus M.J. Wynne, and were found in two contrasting spring types in the northern Apennines. The three new species described differ morphologically from the most similar species by: less dense striae and areolae, and the absence of a ridge at the valve face-mantle transition (SEM feature) [Eunotia crassiminor Lange-Bert. et Cantonati sp. nov.; closest established species: Eunotia minor (Kütz.) Grunow]; narrower and shorter cells [Planothidium angustilanceolatum Lange-Bert. et Cantonati sp. nov.; most similar species: Planothidium lanceolatum (Bréb. ex Kütz.) Lange-Bert.]; barely-dorsiventral symmetry, set off ends, and lower density of the central dorsal striae [Delicatophycus crassiminutus Lange-Bert. et Cantonati sp. nov.; most similar species: Delicatophycus minutus M.J.Wynne]. Two of the three species we described are separated from the closest species by dimensions. Their description improved knowledge on two taxa (Eunotia minor s.l. and Planothidium lanceolatum s.l.) likely to be only partially resolved species complexes. We could also refine knowledge on the ecological profiles of the three newly-described species. Eunotia crassiminor sp. nov., as compared to Eunotia minor, appears to occur in colder inland waters with a circumneutral pH and a strict oligotrophy as well with respect to nitrogen. The typical habitat of Planothidium angustilanceolatum sp. nov. appears to be oligotrophic mountain flowing springs with low conductivity. Delicatophycus crassiminutus sp. nov. was observed only in limestone-precipitating springs, and is therefore likely to be restricted to hard water springs and comparable habitats where CO2 degassing leads to carbonate precipitation. Springs are a unique but severely threatened wetland type. Therefore, the in-depth knowledge of the taxonomy and ecology of characteristic diatom species is important, because diatoms are excellent indicators of the quality and integrity of these peculiar ecosystems in the face of direct and indirect human impacts

Specific rank for several infraspecific taxa in the genus Pinnularia Ehrenb.

A new specific status for some taxa belonging to Pinnularia Ehrenb. is proposed, due to taxonomic inconsistencies concerning the ir current infraspecific rank. The morphological differences from their nominate varieties appear too conspicuous for assuming conspecifity.Предложены новые таксономические комбинации в роде Pinnularia Ehrenb. Проведена ревизия базионимов и возможных синонимов

Simonsenia aveniformis sp nov (Bacillariophyceae), molecular phylogeny and systematics of the genus, and a new type of canal raphe system

The genus Simonsenia is reviewed and S. aveniformis described as new for science by light and electron microscopy. The new species originated from estuarine environments in southern Iberia (Atlantic coast) and was isolated into culture. In LM, Simonsenia resembles Nitzschia, with bridges (fibulae) beneath the raphe, which is marginal. It is only electron microscope (EM) examination that reveals the true structure of the raphe system, which consists of a raphe canal raised on a keel (wing), supported by rib like braces (fenestral bars) and tube-like portulae; between the portulae the keel is perforated by open windows (fenestrae). Based on the presence of portulae and a fenestrated keel, Simonsenia has been proposed to be intermediate between Bacillariaceae and Surirellaceae. However, an rbcL phylogeny revealed that Simonsenia belongs firmly in the Bacillariaceae, with which it shares a similar chloroplast arrangement, rather than in the Surirellaceae. Lack of homology between the surirelloid and simonsenioid keels is reflected in subtle differences in the morphology and ontogeny of the portulae and fenestrae. The diversity of Simonsenia has probably been underestimated, particularly in the marine environment.Polish National Science Centre in Cracow within the Maestro program [N 2012/04/A/ST10/00544]; Sciences and Technologies Foundation-FCT (Portugal) [SFRH/BD/62405/2009]info:eu-repo/semantics/publishedVersio

Are drivers of microbial diatom distributions context dependent in human impacted and pristine environments?

Species occurrences are influenced by numerous factors whose effects may be context dependent. Thus, the magnitude of the effects and their relative importance to species distributions may vary among ecosystems due to anthropogenic stressors. To investigate context dependency in factors governing microbial bioindicators, we developed species distribution models (SDMs) for epilithic stream diatom species in human-impacted and pristine sites separately. We performed SDMs using boosted regression trees for 110 stream diatom species, which were common to both data sets, in 164 human-impacted and 164 pristine sites in Finland (covering similar to 1,000 km, 60 degrees to 68 degrees N). For each species and site group, two sets of models were conducted: climate model, comprising three climatic variables, and full model, comprising the climatic and six local environmental variables. No significant difference in model performance was found between the site groups. However, climatic variables had greater importance compared with local environmental variables in pristine sites, whereas local environmental variables had greater importance in human-impacted sites as hypothesized. Water balance and conductivity were the key variables in human-impacted sites. The relative importance of climatic and local environmental variables varied among individual species, but also between the site groups. We found a clear context dependency among the variables influencing stream diatom distributions as the most important factors varied both among species and between the site groups. In human-impacted streams, species distributions were mainly governed by water chemistry, whereas in pristine streams by climate. We suggest that climatic models may be suitable in pristine ecosystems, whereas the full models comprising both climatic and local environmental variables should be used in human-impacted ecosystems.Peer reviewe

A new cell primo-culture method for freshwater benthic diatom communities

A new cell primo-culture method was developed for the benthic diatom community isolated from biofilm sampled in rivers. The approach comprised three steps: (1) scraping biofilm from river pebbles, (2) diatom isolation from biofilm, and (3) diatom community culture. With a view to designing a method able to stimulate the growth of diatoms, to limit the development of other microorganisms, and to maintain in culture a community similar to the original natural one, different factors were tested in step 3: cell culture medium (Chu No 10 vs Freshwater “WC” medium modified), cell culture vessel, and time of culture. The results showed that using Chu No 10 medium in an Erlenmeyer flask for cell culture was the optimal method, producing enough biomass for ecotoxicological tests as well as minimising development of other microorganisms. After 96 h of culture, communities differed from the original communities sampled in the two rivers studied. Species tolerant of eutrophic or saprobic conditions were favoured during culture. This method of diatom community culture affords the opportunity to assess, in vitro, the effects of different chemicals or effluents (water samples andindustrial effluents) on diatom communities, as well as on diatom cells, from a wide range of perspectives

Kulikovskiyia gen. nov. (Bacillariophyceae) from the lateritic rock pools of the Western Ghats, India and from Hainan Province, China

A new triundulate naviculoid diatom genus is described from the Western Ghats of Peninsular India and Hainan Province, China. The new taxon, Kulikovskiyia gen. nov. has robust conical spines along its margin and at the apices and the external valve face has longitudinally‐oriented siliceous slat system extending the length of the valve. The external distal raphe ends bifurcate and terminates on the valve face. There appear to be superficial similarities between this Asian genus and species and Playaensis, a genus comprised of two species found only in the western USA. The systematic position of Kulikovskiyia is discussed, and other than noting its similarities to other biraphid naviculoid diatoms due to symmetry features and the position of the raphe, we are uncertain about its systematic placement at finer levels of classification.Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/153713/1/pre12400_am.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/153713/2/pre12400.pd