Accretion, Outflows, and Winds of Magnetized Stars

Many types of stars have strong magnetic fields that can dynamically influence the flow of circumstellar matter. In stars with accretion disks, the stellar magnetic field can truncate the inner disk and determine the paths that matter can take to flow onto the star. These paths are different in stars with different magnetospheres and periods of rotation. External field lines of the magnetosphere may inflate and produce favorable conditions for outflows from the disk-magnetosphere boundary. Outflows can be particularly strong in the propeller regime, wherein a star rotates more rapidly than the inner disk. Outflows may also form at the disk-magnetosphere boundary of slowly rotating stars, if the magnetosphere is compressed by the accreting matter. In isolated, strongly magnetized stars, the magnetic field can influence formation and/or propagation of stellar wind outflows. Winds from low-mass, solar-type stars may be either thermally or magnetically driven, while winds from massive, luminous O and B type stars are radiatively driven. In all of these cases, the magnetic field influences matter flow from the stars and determines many observational properties. In this chapter we review recent studies of accretion, outflows, and winds of magnetized stars with a focus on three main topics: (1) accretion onto magnetized stars; (2) outflows from the disk-magnetosphere boundary; and (3) winds from isolated massive magnetized stars. We show results obtained from global magnetohydrodynamic simulations and, in a number of cases compare global simulations with observations.Comment: 60 pages, 44 figure

A constant daylength during the precambrian era?

The semidiurnal atmospheric thermal tide would have been resonant with free oscillations of the atmosphere when the day was ~ 21 h long, c. 600 Ma ago. Very large atmospheric tides would have resulted, with associated surface pressure oscillations in excess of 10 mbar in the tropics. Near resonance the Sun's gravitational torque on the atmospheric tide - accelerating Earth's rotation - would have been comparable in magnitude to the decelerating lunar torque upon the oceanic tides. The balance of the opposing torques may have long maintained a resonant ~ 21 h day, perhaps for much of the Precambrian. Because the timescale of lunar orbital evolution is not directly affected, a constant daylength would result in fewer days/month. The hypothesis is shown not to conflict with the available (stromatolitic) evidence. Escape from the resonance could have followed a relatively abrupt global warming, such as that occurring at the end of the Precambrian. Alternatively, escape may simply have followed a major increase in the rate of oceanic tidal dissipation, brought about by the changing topography of the world's oceans. We integrate the history of the lunar orbit with and without a sustained resonance, finding that the impact of a sustained resonance on the other orbital parameters of the Earth-Moon system would not have been large.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/26582/1/0000123.pd

Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins

Single-molecule Förster-resonance energy transfer (smFRET) experiments allow the study of biomolecular structure and dynamics in vitro and in vivo. We performed an international blind study involving 19 laboratories to assess the uncertainty of FRET experiments for proteins with respect to the measured FRET efficiency histograms, determination of distances, and the detection and quantification of structural dynamics. Using two protein systems with distinct conformational changes and dynamics, we obtained an uncertainty of the FRET efficiency ≤0.06, corresponding to an interdye distance precision of ≤2 Å and accuracy of ≤5 Å. We further discuss the limits for detecting fluctuations in this distance range and how to identify dye perturbations. Our work demonstrates the ability of smFRET experiments to simultaneously measure distances and avoid the averaging of conformational dynamics for realistic protein systems, highlighting its importance in the expanding toolbox of integrative structural biology

TRY plant trait database – enhanced coverage and open access

Plant traits—the morphological, anatomical, physiological, biochemical and phenological characteristics of plants—determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait‐based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits—almost complete coverage for ‘plant growth form’. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait–environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives

Two Cases of Mis-diagnosed Popliteal Artery Entrapment Syndrome

AbstractWe present two young patients with persistent lower leg pains on exercise. Both had previously been investigated and treated with bilateral, 4-compartment fasciotomies for presumed chronic compartment syndrome with no effect on their symptoms. Vascular imaging in both relaxed and resisted plantar-flexed positions revealed a diagnosis of popliteal artery entrapment syndrome (PAES) and both patients underwent bilateral release of the popliteal arteries to curative effect.These cases highlight the importance of appropriate investigation of young patients with claudicant symptoms, as the diagnosis of PAES is easily missed with conventional vascular imaging and can lead to irreversible arterial damage