33 research outputs found
Surface Roughness and Streptococcus mutans Adhesion on Metallic and Ceramic Fixed Prosthodontic Materials after Scaling
The aim of this study was to evaluate the surface roughness of fixed prosthodontic materials after polishing or roughening with a stainless steel curette or ultrasonic scaler and to examine the effect of these on Streptococcus mutans adhesion and biofilm accumulation. Thirty specimens (10 x 10 x 3 mm(3)) of zirconia (Zr), pressed lithium disilicate (LDS-Press), milled lithium disilicate glazed (LDS-Glaze), titanium grade V (Ti) and cobalt-chromium (CoCr) were divided into three groups (n = 10) according to surface treatment: polished (C), roughened with stainless steel curette (SC), roughened with ultrasonic scaler (US). Surface roughness values (Sa, Sq) were measured with a spinning disc confocal microscope, and contact angles and surface free energy (SFE) were measured with a contact angle meter. The specimens were covered with sterilized human saliva and immersed into Streptococcus mutans suspensions for bacterial adhesion. The biofilm was allowed to form for 24 h. Sa values were in the range of 0.008-0.139 mu m depending on the material and surface treatment. Curette and ultrasonic scaling increased the surface roughness in LDS-Glaze (p <0.05), Ti (p <0.01) and CoCr (p <0.001), however, surface roughness did not affect bacterial adhesion. Zr C and US had a higher bacterial adhesion percentage compared to LDS-Glaze C and US (p = 0.03). There were no differences between study materials in terms of biofilm accumulation.Peer reviewe
MicroRNA and protein profiles in invasive versus non-invasive oral tongue squamous cell carcinoma cells in vitro
Complex molecular pathways regulate cancer invasion. This study overviewed proteins and microRNAs (miRNAs) involved in oral tongue squamous cell carcinoma (OTSCC) invasion. The human highly aggressive OTSCC cell line HSC-3 was examined in a 3D organotypic human leiomyoma model. Non-invasive and invasive cells were laser-captured and protein expression was analyzed using mass spectrometry-based proteomics and miRNA expression by microarray. In functional studies the 3D invasion assay was replicated after silencing candidate miRNAs, miR-498 and miR-940, in invasive OTSCC cell lines (HSC-3 and SCC-15). Cell migration, proliferation and viability were also studied in the silenced cells. In HSC-3 cells, 67 proteins and 53 miRNAs showed significant fold-changes between non-invasive vs. invasive cells. Pathway enrichment analyses allocated "Focal adhesion" and "ECM-receptor interaction" as most important for invasion. Significantly, in HSC-3 cells, miR-498 silencing decreased the invasion area and miR-940 silencing reduced invasion area and depth. Viability, proliferation and migration weren't significantly affected. In SCC-15 cells, down-regulation of miR-498 significantly reduced invasion and migration. This study shows HSC-3 specific miRNA and protein expression in invasion, and suggests that miR-498 and miR-940 affect invasion in vitro, the process being more influenced by mir-940 silencing in aggressive HSC-3 cells than in the less invasive SCC-15.Peer reviewe
Integrated proteomics identified up-regulated focal adhesion-mediated proteins in human squamous cell carcinoma in an orthotopic murine model
Understanding the molecular mechanisms of oral carcinogenesis will yield important advances in diagnostics, prognostics, effective treatment, and outcome of oral cancer. Hence, in this study we have investigated the proteomic and peptidomic profiles by combining an orthotopic murine model of oral squamous cell carcinoma (OSCC), mass spectrometry-based proteomics and biological network analysis. Our results indicated the up-regulation of proteins involved in actin cytoskeleton organization and cell-cell junction assembly events and their expression was validated in human OSCC tissues. In addition, the functional relevance of talin-1 in OSCC adhesion, migration and invasion was demonstrated. Taken together, this study identified specific processes deregulated in oral cancer and provided novel refined OSCC-targeting molecules.Understanding the molecular mechanisms of oral carcinogenesis will yield important advances in diagnostics, prognostics, effective treatment, and outcome of oral cancer. Hence, in this study we have investigated the proteomic and peptidomic profiles by co95e98208FAPESP - FUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULOCNPQ - CONSELHO NACIONAL DE DESENVOLVIMENTO CIENTÍFICO E TECNOLÓGICO2009/54067-3; 2010/19278-0; 2011/22421-2; 2009/53839-2; 2011/02267-9470567/2009-0; 470549/2011-4; 301702/2011-0; 470268/2013-1; 505413/2013-
Extracellular vesicles derived from cancer-associated fibroblasts induce the migration and invasion of oral squamous cell carcinoma
As one of the most abundant constituents of the tumour microenvironment (TME), cancer-associated fibroblasts (CAF) display critical roles during tumour progression and metastasis. Multiple classes of molecules including growth factors, cytokines, proteases and extracellular matrix proteins, are produced by CAF to act as mediators of the stroma-tumour interactions. One of the main channels for this communication is associated with extracellular vesicles (EV), which are secreted particles loaded with protein and genetic information. In this study, we evaluated the effects of EV derived from CAF primary human cell lines (n = 5) on proliferation, survival, migration, and invasion of oral squamous cell carcinoma (OSCC) cells. As controls, EV from human primary-established normal oral fibroblasts (NOF, n = 5) were used. Our in vitro assays showed that CAF-EV significantly induces migration and invasion of OSCC cells and promote a disseminated pattern of HSC-3 cell invasion in the 3D organotypic assay. Furthermore, gene expression analysis of EV-treated cancer cells revealed changes in the pathways associated with tumour metabolism and up-regulation of tumour invasion genes. Our findings suggest a significant role of CAF-EV in promoting the migration and invasion of OSCC cells, which are related to the activation of cancer-related pathways.Peer reviewe
Genetic predisposition for femoral neck stress fractures in military conscripts
Stress fractures are a significant problem among athletes and soldiers and may result in devastating complications or even permanent handicap. Genetic factors may increase the risk, but no major susceptibility genes have been identified. The purpose of this study was to search for possible genetic factors predisposing military conscripts to femoral neck stress fractures. Eight genes involved in bone metabolism or pathology (COL1A1, COL1A2, OPG, ESR1, VDR, CTR, LRP5, IL-6) were examined in 72 military conscripts with a femoral neck stress fracture and 120 controls. The risk of femoral neck stress fracture was significantly higher in subjects with low weight and body mass index (BMI). An interaction between the CTR (rs1801197) minor allele C and the VDR C-A haplotype was observed, and subjects lacking the C allele in CTR and/or the C-A haplotype in VDR had a 3-fold higher risk of stress fracture than subjects carrying both (OR = 3.22, 95% CI 1.38-7.49, p = 0.007). In addition, the LRP5 haplotype A-G-G-C alone and in combination with the VDR haplotype C-A was associated with stress fractures through reduced body weight and BMI. Our findings suggest that genetic factors play a role in the development of stress fractures in individuals subjected to heavy exercise and mechanical loading. The present results can be applied to the design of future studies that will further elucidate the genetics of stress fractures
Mutations in LRP5 cause primary osteoporosis without features of OI by reducing Wnt signaling activity
Peer reviewe
A novel human leiomyoma tissue derived matrix for cell culture studies
Background: The composition of the matrix molecules is important in in vitro cell culture experiments of e.g. human cancer invasion and vessel formation. Currently, the mouse Engelbreth-Holm-Swarm (EHS) sarcoma -derived products, such as Matrigel (R), are the most commonly used tumor microenvironment (TME) mimicking matrices for experimental studies. However, since Matrigel (R) is non-human in origin, its molecular composition does not accurately simulate human TME. We have previously described a solid 3D organotypic myoma disc invasion assay, which is derived from human uterus benign leiomyoma tumor. Here, we describe the preparation and analyses of a processed, gelatinous leiomyoma matrix, named Myogel. Methods: A total protein extract, Myogel, was formulated from myoma. The protein contents of Myogel were characterized and its composition and properties compared with a commercial mouse Matrigel (R). Myogel was tested and compared to Matrigel (R) in human cell adhesion, migration, invasion, colony formation, spheroid culture and vessel formation experiments, as well as in a 3D hanging drop video image analysis. Results: We demonstrated that only 34 % of Myogel's molecular content was similar to Matrigel (R). All test results showed that Myogel was comparable with Matrigel (R), and when mixed with low-melting agarose (Myogel-LMA) it was superior to Matrigel (R) in in vitro Transwell (R) invasion and capillary formation assays. Conclusions: In conclusion, we have developed a novel Myogel TME matrix, which is recommended for in vitro human cell culture experiments since it closely mimics the human tumor microenvironment of solid cancers.Peer reviewe
In quest of genetic susceptibility to disorders manifesting in fractures:assessing the significance of genetic factors in femoral neck stress fractures and childhood non-OI primary osteoporosis
Abstract
Osteoporosis is a bone disorder that leads to a reduction in bone volume, deterioration of bone microarchitecture and therefore increased fracture risk. Bone disorders such as osteoporosis commonly have both genetic and environmental components. Family and twin studies have shown the importance of genetics in bone formation and health, but most of the genetic factors contributing to bone formation are still largely unknown.
The aim of this thesis was to search for and identify genetic factors that predispose to two different bone disorders manifesting in fractures, namely femoral neck stress fractures and childhood primary osteoporosis without features of OI (i.e. non-OI primary osteoporosis). Furthermore, in vitro studies were performed to elucidate the importance and mechanism of action of identified genetic factors in non-OI primary osteoporosis.
By using candidate gene analyses we identified predisposing alleles, haplotypes and their interactions that increased the risk for femoral neck stress fractures in young male military conscripts. The conscripts lacking the CTR C allele and/or VDR C-A haplotype had a three-fold increased risk for femoral neck stress fractures compared to the carriers of both. Furthermore, conscripts carrying the LRP5 A-G-G-C haplotype had a three-fold increased risk for femoral neck stress fractures and in combination with VDR C-A haplotype a four-fold increased risk for stress fractures. These associations were mediated by low body weight and BMI.
In the search for genetic factors of non-OI primary osteoporosis in children and adolescent, two novel mutations in LRP5 and two more variants in WNT3A and DKK1 were found in patients. The variants were also observed in the affected family members, but not in the control group. The effects of these variants were examined in in vitro studies and the results showed that some LRP5 mutations and the WNT3A variant might reduce bone formation by decreasing the canonical Wnt signalling activity.Tiivistelmä
Osteoporoosi on luustosairaus, joka alentaa luuntiheyttä ja heikentää luun rakennetta ja siten lisää murtumien riskiä. Osteoporoosin kaltaiset luusairaudet ovat usein monitekijäisiä tauteja, joiden syntyyn vaikuttavat sekä perinnölliset että ympäristölliset tekijät. Perhe- ja kaksostutkimukset ovat osoittaneet perinnöllisten tekijöiden olevan tärkeitä luun muodostuksessa ja terveydessä, mutta nämä tekijät ovat kuitenkin vielä suurelta osin tuntemattomia.
Tutkimustyön tavoitteena oli etsiä ja tunnistaa perinnöllisiä tekijöitä, jotka altistavat kahdelle luunmurtumina ilmenevälle sairaudelle: reisiluunkaulan rasitusmurtumille ja lasten primaariselle osteoporoosille. Lisäksi primaariselle osteoporoosille altistavien perinnöllisten tekijöiden merkitystä ja vaikutusmekanismeja tutkittiin in vitro- kokeilla.
Reisiluunkaulan rasitusmurtumille altistavien alleelien, haplotyyppien ja näiden vuorovaikutusten tunnistamiseen käytettiin ehdokasgeenianalyysiä nuorten alokkaiden aineistossa. Potilailla, joilta CTR-geenin C-alleeli ja/tai VDR-geenin C-A haplotyyppi puuttuivat, oli kolminkertainen riski rasitusmurtumien syntyyn molempien geenimuotojen kantajiin verrattuna. Myös LRP5-geenin A-G-G-C haplotyypin kantajilla oli kolminkertainen riski rasitusmurtumiin ja VDR-geenin C-A haplotyyppi ja A-G-G-C yhdessä lähes nelinkertaistivat rasitusmurtumien riskin alokkailla. Näiden assosiaatioiden todettiin välittyvän alhaisen painon ja painoindeksin välityksellä.
Lapsuudessa tai varhaisnuoruudessa puhkeavan primaarisen osteoporoosin perinnöllisten tekijöiden etsinnässä löydettiin kaksi uutta mutaatiota LRP5-geenistä ja yhteensä kaksi uutta muutosta WNT3A- ja DKK1-geeneistä. Uusien ehdokasgeenilöydösten osuutta primaarisen osteoporoosin syntyyn tukee se, että muutokset löydettiin potilaiden lisäksi heidän sairailta sukulaisiltaan eikä muutoksia havaittu kontrolliaineistoissa. Uusien mutaatioiden mahdollisia vaikutuksia tutkittiin in vitro-kokein, jotka osoittivat, että eräät LRP5-geenin mutaatiot ja WNT3A-geenin muutos alentavat kanonisen Wnt-signalointireitin aktiivisuutta ja voivat siten vähentää luunmuodostusta
New SDC function prediction based on protein-protein interaction using bioinformatics tools
The precise roles for SDC have been complex to specify. Assigning and reanalyzing protein and peptide identification to novel protein functions is one of the most important challenges in postgenomic era. Here, we provide SDC molecular description to support, contextualize and reanalyze the corresponding protein-protein interaction (PPI). From SDC-1 data mining, we discuss the potential of bioinformatics tools to predict new biological rules of SDC. Using these methods, we have assembled new possibilities for SDC biology from PPI data, once, the understanding of biology complexity cannot be capture from one simple question83CONSELHO NACIONAL DE DESENVOLVIMENTO CIENTÍFICO E TECNOLÓGICO - CNPQCOORDENAÇÃO DE APERFEIÇOAMENTO DE PESSOAL DE NÍVEL SUPERIOR - CAPESFUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULO - FAPESP141439/2016-588882.305841/2018-012013/02257-
New Genetic Variants in CYP2B6 and SLC6A Support the Role of Oxidative Stress in Familial Ménière’s Disease
The objective was to study the genetic etiology of Ménière’s disease (MD) using next-generation sequencing in three families with three cases of MD. Whole exome sequencing was used to identify rare genetic variants co-segregating with MD in Finnish families. In silico estimations and population databases were used to estimate the frequency and pathogenicity of the variants. Variants were validated and genotyped from additional family members using capillary sequencing. A geneMANIA analysis was conducted to investigate the functional pathways and protein interactions of candidate genes. Seven rare variants were identified to co-segregate with MD in the three families: one variant in the CYP2B6 gene in family I, one variant in GUSB and EPB42 in family II, and one variant in each of the SLC6A, ASPM, KNTC1, and OVCH1 genes in family III. Four of these genes were linked to the same co-expression network with previous familial MD candidate genes. Dysfunction of CYP2B6 and SLC6A could predispose to MD via the oxidative stress pathway. Identification of ASPM and KNTC1 as candidate genes for MD suggests dysregulation of mitotic spindle formation in familial MD. The genetic etiology of familial MD is heterogenic. Our findings suggest a role for genes acting on oxidative stress and mitotic spindle formation in MD but also highlight the genetic complexity of MD