Better Implementation of Calculators in the Classroom Through Parental Involvement

This study examined the changes in parental attitudes towards calculator use in the classroom during their involvement in calculator activities with students. The study also investigated the effectiveness of involving parents in mathematics activities as a support mechanism for calculator implementation in the school as a whole. A class of year 6 students and their parents were chosen for the study. Parents were first given a questionnaire to evaluate their attitudes towards the use of calculators in schools. Interested parents were consequently invited to participate in one fifty-minute lesson per week for eight weeks. During these lessons, calculators were used for a variety of purposes. The changes in parent attitudes were analysed based on the initial questionnaire, initial interview, journal entries during the eight weeks, and the final interview at the conclusion of the study. The researcher\u27s journal was used to identify the researcher\u27s attitude towards calculator use and the effectiveness of parent involvement in the activities. It was concluded that the attitudes of the parents changed over the course of the study. They discovered the potential of calculators as tools and teaching aids and were able to identify more benefits following the study compared with their comments before the study. The benefits that they perceived during the study had a direct effect on their reservations about the use of calculators in the primary classroom. These were significantly reduced by the conclusion of the study and primarily related to the way in which calculators could be used rather than if they should be used. The study revealed that involving the parents in the calculator activities gave them a clearer idea of how they could be used, and that their misconceptions and reservations were minimised as they discovered the potential of calculators for their child\u27s learning

Development and application of an agent based model for glass eel selective tidal stream transport

Temperate eel populations have been in severe decline due to anthropogenic influences. In Europe, acts of regulation are in place for the sustainable management of the European eel (A. anguilla) population, through annual assessment of commercial landings and recruitment trends. Recruitment of juvenile eels into estuaries and subsequent rivers is thought to occur through usage of the flood, ebb and slack tides (Selective Tidal Stream Transport, STST) and other environmental variables. However, instalment of estuarine barriers is known to affect upstream migration with adverse consequences for the population. To evaluate anthropogenic impact (e.g. estuarine barriers) on recruitment and aid in the improvement of population assessment, we present an Agent-Based Model (ABM) for the upstream migration of glass eels/ elvers through estuaries. A systematic review of the impacts of environmental factors based on a meta-analysis of the literature provided the behavioural parameters of the agents. The ABM is coupled to a hydrodynamic model of the Thames Estuary (UK) and simulations are validated with catchment data from different sampling sites along this waterway. Results from the meta-analysis show that the predominant mechanisms for upstream migration include drifting with the flood tide and remaining in the substratum during ebb tide, whereas exploitation of the slack tide is debatable. Water temperature, the salinity gradient, and the moon phase are the most reported environmental variables affecting STST/ migration. Based on this, the ABM proved to be successful in predicting upstream migration along the Thames while explaining the efficiency of STST. Finally, the ABM is applied The Milford Haven Waterway (UK), which is heavily exploited by human activities, to provide information on possible recruitment success here and illustrate its functionality in the context of estuarine barrier management

Early Holocene decadal-scale ocean variability recorded in Gulf of California laminated sediments

Scanning electron microscope examination of Holocene laminated sediment from Guaymas Basin, Gulf of California, resolves up to five depositional events per year. Each lamina/sublamina of an early Holocene section of continuously laminated sediment was recorded from backscattered electron imagery photomosaic analysis. Diatom mat laminae, composed predominantly of Thalassiothrix longissima, are associated with early winter mixed diatom flora laminae. Mats are probably brought into the Gulf with Pacific water during the summer, concentrated at the surface or at the pycnocline, and then rapidly deposited in the early winter as water column stratification breaks down. Time series analysis of one ∼300-year section from piston core JPC56 revealed significant periodicities in the deposition of mat laminae at ∼50 years, ∼11 years, and 22–24 years. An ∼50-year cycle in fish populations has been related to changing North Pacific ocean/atmosphere circulation. These Pacific-wide changes in circulation affect the currents dominant at the mouth of the Gulf. When the California Current is dominant, fewer diatom mats are imported into the Gulf, and when the north equatorial Pacific gyre is dominant, more are imported. The ∼11-year, 22- to 24-year, and ∼50-year cycles are all suggested to be influenced by solar cycles

Stimulated grip strength measurement: Validation of a novel method for functional assessment

BackgroundReliable measurement of functional recovery is critical in translational peripheral nerve regeneration research. Behavioral functional assessments such as volitional grip strength testing (vGST) are limited by inherent behavioral variability. Isometric tetanic force testing (ITFT) is highly reliable but precludes serial measurements. Combining elements of vGST and ITFT, stimulated grip strength testing (sGST) involves percutaneous median nerve stimulation to elicit maximal tetanic contraction of digital flexors, thereby allowing for consistent measurement of maximal grip strength.MethodsWe measured side‐to‐side equivalence of force using sGST, vGST, and ITFT to determine relative reliability and repeatability. We also performed weekly force measurements following median nerve repair.ResultssGST demonstrated greater reliability and inter‐trial repeatability than vGST and similar reliability to ITFT, with the added benefit of serial measurements.ConclusionssGST is a valid method for assessing functional recovery that addresses the limitations of the currently available modalities used in translational peripheral nerve regeneration research.Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/151883/1/mus26646.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/151883/2/mus26646_am.pd

Involvement of a specificity proteins-binding element in regulation of basal and estrogen-induced transcription activity of the BRCA1 gene

INTRODUCTION:Increased estrogen level has been regarded to be a risk factor for breast cancer. However, estrogen has also been shown to induce the expression of the tumor suppressor gene, BRCA1. Upregulation of BRCA1 is thought to be a feedback mechanism for controlling DNA repair in proliferating cells. Estrogens enhance transcription of target genes by stimulating the association of the estrogen receptor (ER) and related coactivators to estrogen response elements or to transcription complexes formed at activator protein (AP)-1 or specificity protein (Sp)-binding sites. Interestingly, the BRCA1 gene lacks a consensus estrogen response element. We previously reported that estrogen stimulated BRCA1 transcription through the recruitment of a p300/ER-alpha complex to an AP-1 site harbored in the proximal BRCA1 promoter. The purpose of the study was to analyze the contribution of cis-acting sites flanking the AP-1 element to basal and estrogen-dependent regulation of BRCA1 transcription.METHODS:Using transfection studies with wild-type and mutated BRCA1 promoter constructs, electromobility binding and shift assays, and DNA-protein interaction and chromatin immunoprecipitation assays, we investigated the role of Sp-binding sites and cAMP response element (CRE)-binding sites harbored in the proximal BRCA1 promoter.RESULTS:We report that in the BRCA1 promoter the AP-1 site is flanked upstream by an element (5'-GGGGCGGAA-3') that recruits Sp1, Sp3, and Sp4 factors, and downstream by a half CRE-binding motif (5'-CGTAA-3') that binds CRE-binding protein. In ER-alpha-positive MCF-7 cells and ER-alpha-negative Hela cells expressing exogenous ER-alpha, mutation of the Sp-binding site interfered with basal and estrogen-induced BRCA1 transcription. Conversely, mutation of the CRE-binding element reduced basal BRCA1 promoter activity but did not prevent estrogen activation. In combination with the AP-1/CRE sites, the Sp-binding domain enhanced the recruitment of nuclear proteins to the BRCA1 promoter. Finally, we report that the MEK1 (mitogen-activated protein kinase kinase-1) inhibitor PD98059 attenuated the recruitment of Sp1 and phosphorylated ER-alpha, respectively, to the Sp and AP-1 binding element.CONCLUSION:These cumulative findings suggest that the proximal BRCA1 promoter segment comprises cis-acting elements that are targeted by Sp-binding and CRE-binding proteins that contribute to regulation of BRCA1 transcription.This item is part of the UA Faculty Publications collection. For more information this item or other items in the UA Campus Repository, contact the University of Arizona Libraries at [email protected]

Evolution of the Toarcian (Early Jurassic) carbon-cycle and global climatic controls on local sedimentary processes (Cardigan Bay Basin, UK)

The late Early Jurassic Toarcian Stage represents the warmest interval of the Jurassic Period, with an abrupt rise in global temperatures of up to ∼7 °C in mid-latitudes at the onset of the early Toarcian Oceanic Anoxic Event (T-OAE; ∼183 Ma). The T-OAE, which has been extensively studied in marine and continental successions from both hemispheres, was marked by the widespread expansion of anoxic and euxinic waters, geographically extensive deposition of organic-rich black shales, and climatic and environmental perturbations. Climatic and environmental processes following the T-OAE are, however, poorly known, largely due to a lack of study of stratigraphically well-constrained and complete sedimentary archives. Here, we present integrated geochemical and physical proxy data (high-resolution carbon-isotope data (δ13C), bulk and molecular organic geochemistry, inorganic petrology, mineral characterisation, and major- and trace-element concentrations) from the biostratigraphically complete and expanded entire Toarcian succession in the Llanbedr (Mochras Farm) Borehole, Cardigan Bay Basin, Wales, UK. With these data, we (1) construct the first high-resolution biostratigraphically calibrated chemostratigraphic reference record for nearly the complete Toarcian Stage, (2) establish palaeoceanographic and depositional conditions in the Cardigan Bay Basin, (3) show that the T-OAE in the hemipelagic Cardigan Bay Basin was marked by the occurrence of gravity-flow deposits that were likely linked to globally enhanced sediment fluxes to continental margins and deeper marine (shelf) basins, and (4) explore how early Toarcian (tenuicostatum and serpentinum zones) siderite formation in the Cardigan Bay Basin may have been linked to low global oceanic sulphate concentrations and elevated supply of iron (Fe) from the hinterland, in response to climatically induced changes in hydrological cycling, global weathering rates and large-scale sulphide and evaporite deposition

Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context

Long noncoding RNAs (lncRNAs) are commonly dys-regulated in tumors, but only a handful are known toplay pathophysiological roles in cancer. We inferredlncRNAs that dysregulate cancer pathways, onco-genes, and tumor suppressors (cancer genes) bymodeling their effects on the activity of transcriptionfactors, RNA-binding proteins, and microRNAs in5,185 TCGA tumors and 1,019 ENCODE assays.Our predictions included hundreds of candidateonco- and tumor-suppressor lncRNAs (cancerlncRNAs) whose somatic alterations account for thedysregulation of dozens of cancer genes and path-ways in each of 14 tumor contexts. To demonstrateproof of concept, we showed that perturbations tar-geting OIP5-AS1 (an inferred tumor suppressor) andTUG1 and WT1-AS (inferred onco-lncRNAs) dysre-gulated cancer genes and altered proliferation ofbreast and gynecologic cancer cells. Our analysis in-dicates that, although most lncRNAs are dysregu-lated in a tumor-specific manner, some, includingOIP5-AS1, TUG1, NEAT1, MEG3, and TSIX, synergis-tically dysregulate cancer pathways in multiple tumorcontexts

Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas

This integrated, multiplatform PanCancer Atlas study co-mapped and identified distinguishing molecular features of squamous cell carcinomas (SCCs) from five sites associated with smokin

Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas

Although theMYConcogene has been implicated incancer, a systematic assessment of alterations ofMYC, related transcription factors, and co-regulatoryproteins, forming the proximal MYC network (PMN),across human cancers is lacking. Using computa-tional approaches, we define genomic and proteo-mic features associated with MYC and the PMNacross the 33 cancers of The Cancer Genome Atlas.Pan-cancer, 28% of all samples had at least one ofthe MYC paralogs amplified. In contrast, the MYCantagonists MGA and MNT were the most frequentlymutated or deleted members, proposing a roleas tumor suppressors.MYCalterations were mutu-ally exclusive withPIK3CA,PTEN,APC,orBRAFalterations, suggesting that MYC is a distinct onco-genic driver. Expression analysis revealed MYC-associated pathways in tumor subtypes, such asimmune response and growth factor signaling; chro-matin, translation, and DNA replication/repair wereconserved pan-cancer. This analysis reveals insightsinto MYC biology and is a reference for biomarkersand therapeutics for cancers with alterations ofMYC or the PMN

Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images

Beyond sample curation and basic pathologic characterization, the digitized H&E-stained images of TCGA samples remain underutilized. To highlight this resource, we present mappings of tumorinfiltrating lymphocytes (TILs) based on H&E images from 13 TCGA tumor types. These TIL maps are derived through computational staining using a convolutional neural network trained to classify patches of images. Affinity propagation revealed local spatial structure in TIL patterns and correlation with overall survival. TIL map structural patterns were grouped using standard histopathological parameters. These patterns are enriched in particular T cell subpopulations derived from molecular measures. TIL densities and spatial structure were differentially enriched among tumor types, immune subtypes, and tumor molecular subtypes, implying that spatial infiltrate state could reflect particular tumor cell aberration states. Obtaining spatial lymphocytic patterns linked to the rich genomic characterization of TCGA samples demonstrates one use for the TCGA image archives with insights into the tumor-immune microenvironment