221 research outputs found

    Phosphorylation-facilitated sumoylation of MEF2C negatively regulates its transcriptional activity

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    BACKGROUND: Sumoylation has emerged as an important posttranslational regulatory mechanism for transcription factors and cofactors. Sumoylation of many transcription factors represses their transcriptional activities. The myocyte enhancer factor 2 (MEF2) family of transcription factors plays an important role in regulating gene expression during myogenesis and has been recently shown to be sumoylated. RESULTS: Consistent with earlier reports, we show that sumoylation of MEF2C at K391 inhibits its transcriptional activity. Sumoylation of MEF2C does not block its DNA-binding activity. A small C-terminal fragment of MEF2C containing K391, referred to as delta-N2-MEF2C, is efficiently sumoylated and, when targeted to DNA, represses transcription at neighbouring promoters. Because delta-N2-MEF2C lacks the binding site for class II histone deacetylases (HDACs), this result suggests that sumoylation of MEF2C may help to recruit transcriptional repressors other than these HDACs. Intriguingly, we show that phosphorylation of S396 in MEF2C, a residue in close proximity to the major sumoylation site (K391) and known to be phosphorylated in vivo, enhances sumoylation of delta- N2-MEF2C in vitro. The S396A mutation reduces sumoylation of MEF2C in vivo and enhances the transcription activity of MEF2C in reporter assays. CONCLUSION: We propose that phosphorylation of MEF2C at S396 facilitates its sumoylation at K391, which in turn recruits yet unidentified co-repressors to inhibit transcription. Our studies further suggest that sumoylation motifs containing a phosphorylated serine or an acidic residue at the +5 position might be more efficiently sumoylated

    Cell Biomechanical Modeling Based on Membrane Theory with Considering Speed Effect of Microinjection

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    As an effective method to deliver external materials into biological cells, microinjection has been widely applied in the biomedical field. However, the cognition of cell mechanical property is still inadequate, which greatly limits the efficiency and success rate of injection. Thus, a new rate-dependent mechanical model based on membrane theory is proposed for the first time. In this model, an analytical equilibrium equation between the injection force and cell deformation is established by considering the speed effect of microinjection. Different from the traditional membrane-theory-based model, the elastic coefficient of the constitutive material in the proposed model is modified as a function of the injection velocity and acceleration, effectively simulating the influence of speeds on the mechanical responses and providing a more generalized and practical model. Using this model, other mechanical responses at different speeds can be also accurately predicted, including the distribution of membrane tension and stress and the deformed shape. To verify the validity of the model, numerical simulations and experiments are carried out. The results show that the proposed model can match the real mechanical responses well at different injection speeds.Comment: 10 pages, 12 figures, submitted to IEEE TMech

    An Integrative Remote Sensing Application of Stacked Autoencoder for Atmospheric Correction and Cyanobacteria Estimation Using Hyperspectral Imagery

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    Hyperspectral image sensing can be used to effectively detect the distribution of harmful cyanobacteria. To accomplish this, physical- and/or model-based simulations have been conducted to perform an atmospheric correction (AC) and an estimation of pigments, including phycocyanin (PC) and chlorophyll-a (Chl-a), in cyanobacteria. However, such simulations were undesirable in certain cases, due to the difficulty of representing dynamically changing aerosol and water vapor in the atmosphere and the optical complexity of inland water. Thus, this study was focused on the development of a deep neural network model for AC and cyanobacteria estimation, without considering the physical formulation. The stacked autoencoder (SAE) network was adopted for the feature extraction and dimensionality reduction of hyperspectral imagery. The artificial neural network (ANN) and support vector regression (SVR) were sequentially applied to achieve AC and estimate cyanobacteria concentrations (i.e., SAE-ANN and SAE-SVR). Further, the ANN and SVR models without SAE were compared with SAE-ANN and SAE-SVR models for the performance evaluations. In terms of AC performance, both SAE-ANN and SAE-SVR displayed reasonable accuracy with the Nash???Sutcliffe efficiency (NSE) > 0.7. For PC and Chl-a estimation, the SAE-ANN model showed the best performance, by yielding NSE values > 0.79 and > 0.77, respectively. SAE, with fine tuning operators, improved the accuracy of the original ANN and SVR estimations, in terms of both AC and cyanobacteria estimation. This is primarily attributed to the high-level feature extraction of SAE, which can represent the spatial features of cyanobacteria. Therefore, this study demonstrated that the deep neural network has a strong potential to realize an integrative remote sensing application

    Seasonal Variations in Hydrological Influences on Gravity Measurements Using gPhones

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    Hydrological influences on a local gravity field may reach amplitudes on the order of 10 microgals. Since 2007, fifteen Microg LaCoste gPhones have been successively installed in gravity stations in China. The outputs from gPhones include ten data channels with second sampling such as raw gravity, corrected gravity, long level data and cross level data, ambient and sensor temperature, ambient and sensor pressure, and others. In this study, we select six stations in northwest China (GaoTai, LaSa, LanZhou, ShiQuanHe, WuShi, XiAn) and one station in the northeast (HaiLaEr). We have modeled the major tides (earth solid tide, ocean tide and pole tide), corrected for atmospheric loading effects using local measurements, fitted instrumental drift using segmental fitting based on the distinct characteristics of gravimeter drift, and ultimately obtained the monthly residual gravity with amplitudes of 10 ~ 20 microgals. We find that the results obtained by the gravimeter for those stations with stable conditions and no large disturbances are obviously correlated with hydrologic loading as modeled by the Global Land Data Assimilation System and Climate Prediction Center. We also notice that at some stations there are obvious phase lags with a period of three months or more between the residual gravity and the influence of hydrological loading. These large discrepancies may be associated with local hydrologic effects, local topography or some other complex tectonic movement and geodynamical mechanism, which were not considered in this paper

    Using the water quality index (WQI), and the synthetic pollution index (SPI) to evaluate the groundwater quality for drinking purpose in Hailun, China

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    Due to the impact of human agricultural production, climate and environmental changes. The applicability of groundwater for drinking purposes has attracted widespread attention. In order to quantify the hydrochemical characteristics of groundwater in Hailun and evaluate its suitability for assessing water for drinking purposes, 77 shallow groundwater samples and 57 deep groundwater samples were collected and analyzed. The results show that deep groundwater in aquifers in the study area is weakly alkaline, while that in shallow is acidic. The abundance is in the order HCO3 - > Cl- > SO4 2- for anions, and Ca2+> Na+> Mg2+ for cations. Groundwater chemical type were dominated by HCO3 -Ca, HCO3 -Ca• Mg, and HCO3 -Ca• Na. Correlation analysis (CA) and Durov diagram showed that rock weathering and dissolution, human activities, and the hydraulic connection between shallow and deep water are the main reasons affecting the chemical composition of water in Helen. The analysis of water samples based on the WQI model showed that about 23.37, 23.37, 32.46, 12.98, and 7.79% of the shallow groundwater samples were excellent, good, poor, very poor, and unsuitable for drinking purposes, respectively, and that 61.40, 30.90, 5.26, 1.75, and 1.75% of the deep groundwater samples were excellent, good, poor, very poor, and unsuitable for drinking purposes, respectively. The analysis of groundwater samples based on the SPI model showed that 92.98% of the deep groundwater samples were suitable grade, while that 40.25% of the shallow groundwater samples were suitable grade. The spatial distribution maps of the WQI and SPI show that most of the deep groundwater resources in the study area are clean and suitable for drinking, despite the risks of the shallow groundwater in the north and southwest of the study area

    Clinical Study Intranasal Dexmedetomidine on Stress Hormones, Inflammatory Markers, and Postoperative Analgesia after Functional Endoscopic Sinus Surgery

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    Background. A strong ongoing intraoperative stress response can cause serious adverse reactions and affect the postoperative outcome. This study evaluated the effect of intranasally administered dexmedetomidine (DEX) in combination with local anesthesia (LA) on the relief of stress and the inflammatory response during functional endoscopic sinus surgery (FESS). Methods. Sixty patients undergoing FESS were randomly allocated to receive either intranasal DEX (DEX group) or intranasal saline (Placebo group) 1 h before surgery. Stress hormones, inflammatory markers, postoperative pain relief, hemodynamic variables, blood loss, surgical field quality, body movements, and satisfaction were assessed. Results. Plasma epinephrine, norepinephrine, and blood glucose levels were significantly lower in DEX group as were the plasma IL-6 and TNF-levels ( < 0.05). The weighted areas under the curve (AUCw) of the VAS scores were also significantly lower in DEX group at 2-12 h after surgery ( < 0.001). Furthermore, hemodynamic variables, blood loss, body movements, discomfort with hemostatic stuffing, surgical field quality, and satisfaction scores of patients and surgeons were significantly better ( < 0.05) in DEX group. Conclusions. Patients receiving intranasal DEX with LA for FESS exhibited less perioperative stress and inflammatory response as well as better postoperative comfort with hemostatic stuffing and analgesia
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