5,177 research outputs found

    A submillimeter interference spectrometer - Characteristics, performance and measurements

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    Performance characteristics of interference spectrometer using submillimeter wave

    Gene loss and lineage specific restriction-modification systems associated with niche differentiation in the Campylobacter jejuni Sequence Type 403 clonal complex

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    Campylobacter jejuni is a highly diverse species of bacteria commonly associated with infectious intestinal disease of humans and zoonotic carriage in poultry, cattle, pigs, and other animals. The species contains a large number of distinct clonal complexes that vary from host generalist lineages commonly found in poultry, livestock, and human disease cases to host-adapted specialized lineages primarily associated with livestock or poultry. Here, we present novel data on the ST403 clonal complex of C. jejuni, a lineage that has not been reported in avian hosts. Our data show that the lineage exhibits a distinctive pattern of intralineage recombination that is accompanied by the presence of lineage-specific restriction-modification systems. Furthermore, we show that the ST403 complex has undergone gene decay at a number of loci. Our data provide a putative link between the lack of association with avian hosts of C. jejuni ST403 and both gene gain and gene loss through nonsense mutations in coding sequences of genes, resulting in pseudogene formation

    The Anti-Coincidence Detector for the GLAST Large Area Telescope

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    This paper describes the design, fabrication and testing of the Anti-Coincidence Detector (ACD) for the Gamma-ray Large Area Space Telescope (GLAST) Large Area Telescope (LAT). The ACD is LAT first-level defense against the charged cosmic ray background that outnumbers the gamma rays by 3-5 orders of magnitude. The ACD covers the top and 4 sides of the LAT tracking detector, requiring a total active area of ~8.3 square meters. The ACD detector utilizes plastic scintillator tiles with wave-length shifting fiber readout. In order to suppress self-veto by shower particles at high gamma-ray energies, the ACD is segmented into 89 tiles of different sizes. The overall ACD efficiency for detection of singly charged relativistic particles entering the tracking detector from the top or sides of the LAT exceeds the required 0.9997.Comment: 33 pages, 19 figure

    Phase sensitive detection of dipole radiation in a fiber-based high numerical aperture optical system

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    We theoretically study the problem of detecting dipole radiation in an optical system of high numerical aperture in which the detector is sensitive to \textit{field amplitude}. In particular, we model the phase sensitive detector as a single-mode cylindrical optical fiber. We find that the maximum in collection efficiency of the dipole radiation does not coincide with the optimum resolution for the light gathering instrument. The calculated results are important for analyzing fiber-based confocal microscope performance in fluorescence and spectroscopic studies of single molecules and/or quantum dots.Comment: 12 pages, 2 figure

    Effects of five years of frequent N additions, with or without acidity, on the growth and below-ground dynamics of a young Sitka spruce stand growing on an acid peat: implications for sustainability

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    International audienceA field manipulation study was established to demonstrate effects of simulated wet N and S deposition on a young (planted 1986) stand of Sitka spruce growing on a predominantly organic soil in an area of low (8?10 kg N ha-1 yr-1) background N deposition in the Scottish borders. From 1996, treatments (six) were applied to the canopies of ten-tree plots in each of four blocks. N was provided as NH4NO3, either with H2SO4 (pH 2.5) at 48 or 96 kg N ha-1 yr-1 inputs or without, at 48 kg N ha-1 yr-1 along with wet (rain water) and dry controls (scaffolding) and a S treatment (Na2SO4). Positive responses (+ >20% over 5 years) with respect to stem area increment were measured in response to N inputs, irrespective of whether acid was included. The positive response to N was not dose related and was achieved against falling base cation concentrations in the foliage, particularly with respect to K. The results suggest young trees are able to buffer the low nutrient levels and produce new growth when there is sufficient N. Inputs of 96 kg N ha-1 yr-1, in addition to ambient N inputs, on this site exceeded tree demand resulting in elevated foliar N, N2O losses and measurable soil water N. These excessive N inputs did not reduce stem area growth. Keywords: acid, canopy application, nitrogen, acid organic soil, simulated wet deposition, soil water, sulphur, young Sitka spruc

    Visual Climate Change Communication: From Iconography To Locally Framed 3D Visualization

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    Climate change is an urgent problem with implications registered not only globally, but also on national and local scales. It is a particularly challenging case of environmental communication because its main cause, greenhouse gas emissions, is invisible. The predominant approach of making climate change visible is the use of iconic, often affective, imagery. Literature on the iconography of climate change shows that global iconic motifs, such as polar bears, have contributed to a public perception of the problem as spatially and temporally remote. This paper proposes an alternative approach to global climate change icons by focusing on recognizable representations of local impacts within an interactive game environment. This approach was implemented and tested in a research project based on the municipality of Delta, British Columbia. A major outcome of the research is Future Delta, an interactive educational game featuring 3D visualizations and simulation tools for climate change adaptation and mitigation future scenarios. The empirical evaluation is based on quantitative pre/post-game play questionnaires with 18 students and 10 qualitative expert interviews. The findings support the assumption that interactive 3D imagery is effective in communicating climate change. The quantitative post-questionnaires particularly highlight a shift in support of more local responsibility

    Posterior parietal cortex guides visual decisions in rats

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    Neurons in putative decision-making structures can reflect both sensory and decision signals, making their causal role in decisions unclear. Here, we tested whether rat posterior parietal cortex (PPC) is causal for processing visual sensory signals or instead for accumulating evidence for decision alternatives. We optogenetically disrupted PPC activity during decision-making and compared effects on decisions guided by auditory vs. visual evidence. Deficits were largely restricted to visual decisions. To further test for visual dominance in PPC, we evaluated electrophysiological responses following individual sensory events and observed much larger response modulation following visual stimuli than auditory stimuli. Finally, we measured trial-to-trial spike count variability during stimulus presentation and decision formation. Variability sharply decreased, suggesting the network is stabilized by inputs, unlike what would be expected if sensory signals were locally accumulated. Our findings argue that PPC plays a causal role in processing visual signals that are accumulated elsewhere.SIGNIFICANCE STATEMENTDefining the neural circuits that support decision-making bridges a gap between our understanding of simple sensorimotor reflexes and our understanding of truly complex behavior. However, identifying brain areas which play a causal role in decision-making has proved challenging. We tested the causal role of a candidate component of decision circuits, the rat posterior parietal cortex (PPC). Our interpretation of the data benefitted from our use of animals trained to make decisions guided by either visual or auditory evidence. Our results argue that PPC plays a causal role specifically in visual decision-making, and that PPC may support sensory aspects of the decision, such as interpreting the visual signals so that evidence for a decision can be accumulated elsewhere

    Prioritisation of weed species relevant to Australian livestock industries for biological control

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    Classical biological control is the only realistic option for managing many of the most serious weeds affecting livestock industries in Australia. This project developed and applied a framework, based on a matrix assessment system, to prioritise biocontrol efforts using new agents against 79 weed taxa. These taxa were identified in a concurrent project as priorities for Research, Development and Extension to address weed problems of Australian livestock industries. The framework considered the current and potential impacts of the weeds versus prospects for biocontrol. The latter combined assessments of feasibility of undertaking a biocontrol program that would yield host-specific agents, and the likelihood that agents would be successful in mitigating the impacts of the weeds once released in Australia. Each categorisation was supported with a written rationale that explained the ranking assigned and captured uncertainties. Key investment areas for future actions to address biocontrol knowledge gaps for each weed were identified. Twenty-one weeds with the highest combined rankings for biocontrol prospects and current and/or potential impacts were shortlisted as priority taxa for future investment. Results provide the best available information for funding agencies responsible for RD&E for livestock industries to make investment decisions across their weed biocontrol portfolio

    Case-control study of multiple myeloma and farming.

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    A previous case-control study which utilised the occupational information available on the New Zealand Cancer Registry found an increased risk of multiple myeloma in agricultural workers consistent with previous findings in the United States. The findings are now presented for the second phase of the study which involved interviewing 76 cases of multiple myeloma (who had been included in the previous study) together with 315 controls with other types of cancer. The previous finding on an excess of farmers in the case group was confirmed by the interview data (odds ratio = 1.7, 95% confidence limits 1.0-2.9, P = 0.04). There were no significant differences between cases and controls regarding potential exposure to phenoxy herbicides or chlorophenols. There were also no significant differences regarding activities involving potential exposure to other agricultural chemicals, although the odds ratio for fencing work, which may involve exposure to arsenic and sodium pentachlorophenate, was 1.6 (95% confidence limits 0.9-2.7, P = 0.11). The odds ratios were significantly elevated for sheep farming (odds ratio = 1.9, 95% confidence limits 1.0-3.6, P = 0.04) and exposure to beef cattle (odds ratio = 1.7, 95% confidence limits 1.0-2.9, P = 0.05). The odds ratio was also elevated for persons reporting a history of hay fever (odds ratio = 1.9, 95% confidence limits 1.0-3.5, P = 0.05). Overall, these findings suggest that the search for the causes of elevated mortality in farmers from multiple myeloma should be directed to potential causes other than pesticide exposure
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