10 research outputs found
Dendrobium Swarz.(ラン科)の類縁に関する研究 : I. Eugenanthe Schlechter節内での交配親和性
1.ノビルタイプのデンドロビウム品種に.新しい遺伝子を導入する可能性を調べるため, Eugenanthe節内の22種と、D. moniliforme(セッコク), D. nobileとの交配を行なった.2.交配稔性からみて, 本節内にはD. moniliforme, D. nobileとは遠縁と思われる種が含まれていた.3.D. moniliformeは, D. nobileに比べ, 多くの種と交雑可能で, 今後の育種のために有用な種と考えられた.In order to check the possibility of introducing new genes into the modern nobile-type cultivars of Dendrobium, D. nobile Lindl. and D. moniliforme (L.) Swarz. were crossed with selected species of section Eugenanthe Schlechter. D. moniliforme showed a wider range of crossability with Eugenanthe species compared to D. nobile. Eugenanthe species were divided into two groups according to their crossability with D. moniliforme
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<p>Venn diagrams of differentially expressed genes, where <b>(A)</b> green circles indicate number of total genes are up-regulated each time point, and <b>(B)</b> red circles indicate number of total genes were down-regulated each time point. EE indicates cells analyzed in early exponential phase, ME, mid-exponential phase and ES, early stationary phase, where actual times of sampling each cell population is indicated in the methods as well as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0186440#pone.0186440.g001" target="_blank">Fig 1A</a>. <b>(C)</b> Changes in the gene profile as a result of lignin exposure in early exponential phase, mid-exponential and early stationary phase of growth. In the right side of each chart (blue), number of genes with increased relative abundance, and in the left side (red), number of genes with lower relative abundance. The genes are grouped according to functional class as defined by COG annotation.</p
Summary of genome attributes of <i>Enterobacter lignolyticus</i> SCF1 and three close relatives, <i>E</i>. <i>aerogenes</i>, <i>E</i>. <i>cloacae</i> ATCC13047, and <i>Enterobacter</i> sp. 638.
<p>Summary of genome attributes of <i>Enterobacter lignolyticus</i> SCF1 and three close relatives, <i>E</i>. <i>aerogenes</i>, <i>E</i>. <i>cloacae</i> ATCC13047, and <i>Enterobacter</i> sp. 638.</p
Shared bottlenecks between three inferred networks.
<p>Shared bottlenecks between three inferred networks.</p
Condensed networks of bottlenecks and functional clusters.
<p>A network was inferred from the macrophage innate immune compendium (A), or the blood- (B) or brain-(C) derived transcriptome from the stroke study. Bottlenecks (circles) were identified based on topological betweenness and clusters (squares) were assessed for statistical enrichment in gene ontology functional categories versus genes in the rest of network using the hypergeometric test. Shared functions are indicated by cluster color: orange, immune related/stress response; pink, signaling; green, cell cycle/mitosis. Clusters are labeled with most enriched functional category followed by the negative exponent of the p-value for enrichment. Edges are colored red to indicate that the bottleneck is a member of the cluster that it links to, and red to indicate that the bottleneck is linked to the cluster. Note that not all bottlenecks, clusters or relationships between the two are present in this representation (see text).</p
Clustering of transcripts shows response to lignin in genes of interest in <i>Enterobacter lignolyticus</i> SCF1 grown in glucose with and without lignin.
<p>Fold change indicates change in relative abundance of transcript in lignin-amended compared to unamended growth. Colors to the left of the heatmap indicate functional annotations as indicated. Each row represents gene expression of cells grown in lignin and glucose, compared to cells grown in glucose alone at the same time point.</p
Shared neighbors of Ifit1 in three inferred networks.
a<p>Numbers indicate that the indicated gene is in the first order (1) or second order (2) network of Ifit1 for each network.</p
Total genes up and down regulated in each of the three points monitored during growth of SCF1 in lignin-amended cultures.
<p>The number in parenthesis indicates the percentage of the genes that were differentially expressed under each time.</p
Additional file 3: of The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus
Figure 4 fold changes – fold change data from the analysis depicted in Fig. 4. (XLSX 14 kb
Additional file 6: of The effect of inhibition of PP1 and TNFÎą signaling on pathogenesis of SARS coronavirus
Monocyte and neutrophil marker levels â monocyte- and neutrophil-specific markers allow inference of the presence of these cells. (PDF 252Â kb