A regional study of the genus Phyllopsora (Ramalinaceae) in Asia and Melanesia

Phyllopsora is a crustose to squamulose lichen genus inhabiting the bark of trees in moist tropical forests and rainforests. Species identification is generally challenging and is mainly based on ascospore morphology, thallus morphology and anatomy, vegetative dispersal units, and on secondary chemistry. While regional treatments of the genus have been conducted for Africa, South America and Australia, there exists no study focusing on the Asian and Melanesian species. Previously, 24 species of Phyllopsora s. str. have been reported from major national studies and checklists representing 13 countries. We have studied herbarium material of 625 Phyllopsora specimens from 18 countries using morphology, anatomy, secondary chemistry, and molecular data to investigate the diversity of Phyllopsora species in Asia and Melanesia. We report the occurrence of 28 species of Phyllopsora including the following three species described as new to science: P. sabahana from Malaysia, P. siamensis from Thailand and P. pseudocorallina from Asia and Africa. Eight species are reported as new to Asia. A key to the Asian and Melanesian species of Phyllopsora is provided

Key roles of Dipterocarpaceae, bark type diversity and tree size in lowland rainforests of northeast Borneo—using functional traits of lichens to distinguish plots of old growth and regenerating logged forests

Many lowland rainforests in Southeast Asia are severely altered by selective logging and there is a need for rapid assessment methods to identify characteristic communities of old growth forests and to monitor restoration success in regenerating forests. We have studied the effect of logging on the diversity and composition of lichen communities on trunks of trees in lowland rainforests of northeast Borneo dominated by Dipterocarpaceae. Using data from field observations and vouchers collected from plots in disturbed and undisturbed forests, we compared a taxonomy-based and a taxon-free method. Vouchers were identified to genus or genus group and assigned to functional groups based on sets of functional traits. Both datasets allowed the detection of significant differences in lichen communities between disturbed and undisturbed forest plots. Bark type diversity and the proportion of large trees, particularly those belonging to the family Dipterocarpaceae, were the main drivers of lichen community structure. Our results confirm the usefulness of a functional groups approach for the rapid assessment of tropical lowland rainforests in Southeast Asia. A high proportion of Dipterocarpaceae trees is revealed as an essential element for the restoration of near natural lichen communities in lowland rainforests of Southeast Asia

Estimating nitrogen risk to Himalayan forests using thresholds for lichen bioindicators

Himalayan forests are biodiverse and support the cultural and economic livelihoods of their human communities. They are bounded to the south by the Indo-Gangetic Plain, which has among the highest concentrations of atmospheric ammonia globally. This source of excess nitrogen pushes northwards into the Himalaya, generating concern that Himalayan forests will be impacted. To estimate the extent to which atmospheric nitrogen is impacting Himalayan forests we focussed on lichen epiphytes, which are a well-established bioindicator for atmospheric nitrogen pollution. First, we reviewed published literature describing nitrogen thresholds (critical levels and loads) at which lichen epiphytes are affected, identifying a mean and confidence intervals based on previous research conducted across a diverse set of biogeographic and ecological settings. Second, we used estimates from previously published atmospheric chemistry models (EMEP-WRF and UKCA-CLASSIC) projected to the Himalaya with contrasting spatial resolution and timescales to characterise model variability. Comparing the lichen epiphyte critical levels and loads with the atmospheric chemistry model projections, we created preliminary estimates of the extent to which Himalayan forests are impacted by excess nitrogen; this equated to c. 80–85% and c. 95–98% with respect to ammonia and total nitrogen deposition, respectively. Recognising that lichens are one of the most sensitive bioindicators for atmospheric nitrogen pollution, our new synthesis of previous studies on this topic generated concern that most Himalayan forests are at risk from excess nitrogen. This is a desk-based study that now requires verification through biological surveillance, for which we provide key recommendations

Estimation of ammonia deposition to forest ecosystems in Scotland and Sri Lanka using wind-controlled NH3 enhancement experiments

Ammonia (NH3) pollution has emerged as a major cause of concern as atmospheric concentrations continue to increase globally. Environmentally damaging NH3 levels are expected to severely affect sensitive and economically important organisms, but evidence is lacking in many parts of the world. We describe the design and operation of a wind-controlled NH3 enhancement system to assess effects on forests in two contrasting climates. We established structurally identical NH3 enhancement systems in a temperate birch woodland in the UK and a tropical sub-montane forest in central Sri Lanka, both simulating real-world NH3 pollution conditions. Vertical and horizontal NH3 concentrations were monitored at two different time scales to understand NH3 transport within the forest canopies. We applied a bi-directional resistance model with four canopy layers to calculate net deposition fluxes. At both sites, NH3 concentrations and deposition were found to decrease exponentially with distance away from the source, consistent with expectations. Conversely, we found differences in vertical mixing of NH3 between the two experiments, with more vertically uniform NH3 concentrations in the dense and multi-layered sub-montane forest canopy in Sri Lanka. Monthly NH3 concentrations downwind of the source ranged from 3 to 29 μg m−3 at the UK site and 2–47 μg m−3 at the Sri Lankan site, compared with background values of 0.63 and 0.35 μg m−3, respectively. The total calculated NH3 dry deposition flux to all the canopy layers along the NH3 transects ranged from 12 to 162 kg N ha−1 yr−1 in the UK and 16–426 kg N ha−1 yr−1 in Sri Lanka, representative of conditions in the vicinity of a range of common NH3 sources. This multi-layer model is applicable for identifying the fate of NH3 in forest ecosystems where the gas enters the canopy laterally through the trunk space and exposes the understorey to high NH3 levels. In both study sites, we found that cuticular deposition was the dominant flux in the vegetation layers, with a smaller contribution from stomatal uptake. The new facilities are now allowing the first ever field comparison of NH3 impacts on forest ecosystems, with special focus on lichen bio-indicators, which will provide vital evidence to inform NH3 critical levels and associated nitrogen policy development in South Asia

Three new species and ten new records of <I>Trypetheliaceae</I> (Ascomycota) from Sri Lanka

The following three new species of Trypetheliaceae are described from Sri Lanka: Astrothelium inspersoconicum, A. isohypocrellinum, and Polymeridium fernandoi. Ten species are newly recorded from Sri Lanka: Astrothelium flavoduplex, A. galligenum, A. scoria, A. straminicolor, Constrictolumina planorbis, C. porospora, Dictyomeridium proponens, Marcelaria cumingii, Polymeridium jordanii, and Pseudopyrenula media.</p

A revision of the genus Aciculopsora (Ramalinaceae) with the description of one new species and one new combination

The tropical lichen genus Aciculopsora is still very poorly collected. Only eleven collections are known worldwide. We present a molecular phylogenetic tree based on mtSSU and nrITS sequence data from six Aciculopsora specimens. Our results corroborate the monophyly of the genus. We conclude that Aciculopsora consists of three species: A. cinerea, A. longispora comb. nov. (≡ Phyllopsora longispora, = A. salmonea syn. nov.) and A. srilankensis sp. nov. Aciculopsora cinerea occurs in Brazil, A. longispora in Argentina, Costa Rica, Ecuador, and Kenya, and A. srilankensis in Sri Lanka. As such, the genus is new for the Paleotropics, Argentina and Ecuador

Molecular phylogeny and bioprospecting of Endolichenic Fungi (ELF) inhabiting in the lichens collected from a mangrove ecosystem in Sri Lanka.

Endolichenic fungi (ELF) are unexplored group of organisms as a source for the production of bioactive secondary metabolites with radical scavenging activity, antilipase and amylase inhibitory activities. Endolichenic fungi in lichens collected from mangrove or mangrove associated plants are least known for their fungal diversity and potential to produce bioactive compounds. A total of 171 ELF strains were isolated from the lichens collected from mangrove and mangrove associated plants in Puttalam lagoon. Out of this collection, 70 isolates were identified using rDNA-ITS region sequence homology to the GenBank accessions and a phylogenetic analysis was performed. Commonly isolated genera of ELF from lichens were Aspergillus, Byssochlamys, Talaromyces, Diaporthe, Phomopsis, Endomelanconiopsis, Schizophyllum, Cerrena, Trichoderma, Xylaria, Hypoxylon, Daldinia, Preussia, Sordaria, Neurospora, and Lasiodiplodia. In the present study, the effectiveness of ethyl acetate extracts of the ELF isolates were investigated against antioxidant activity, antilipase activity and α-amylase inhibition activity in in-vitro conditions. The results revealed that the extracts of Daldinia eschscholtzii, Diaporthe musigena and Sordaria sp. had the highest radical scavenging activity with smaller IC50 values (25 μg/mL to 31 μg/mL) compared to the IC50 values of BHT (76.50±1.47 μg/mL). Antilipase assay revealed that 13 extracts from ELF showed promising antiobesity activity ranged between 25% to 40%. Amylase inhibitory assay indicated that the test extracts do not contain antidiabetic secondary metabolites

A regional study of the genus Phyllopsora (Ramalinaceae) in Asia and Melanesia

Phyllopsora is a crustose to squamulose lichen genus inhabiting the bark of trees in moist tropical forests and rainforests. Species identification is generally challenging and is mainly based on ascospore morphology, thallus morphology and anatomy, vegetative dispersal units, and on secondary chemistry. While regional treatments of the genus have been conducted for Africa, South America and Australia, there exists no study focusing on the Asian and Melanesian species. Previously, 24 species of Phyllopsora s. str. have been reported from major national studies and checklists representing 13 countries. We have studied herbarium material of 625 Phyllopsora specimens from 18 countries using morphology, anatomy, secondary chemistry, and molecular data to investigate the diversity of Phyllopsora species in Asia and Melanesia. We report the occurrence of 28 species of Phyllopsora including the following three species described as new to science: P. sabahana from Malaysia, P. siamensis from Thailand and P. pseudocorallina from Asia and Africa. Eight species are reported as new to Asia. A key to the Asian and Melanesian species of Phyllopsora is provided