Estimation of growth parameters for the exploited sea cucumber Holothuria arguinensis from South Portugal

Understanding how species grow is critical for choosing appropriate fisheries management strategies. Sea cucumbers shrink during periods of aestivation and have naturally flaccid bodies that make measuring growth difficult. In this study, we obtained length-frequency data on Holothuria arguinensis, measuring undisturbed animals in situ, because it is one of the new target species of the NE Atlantic and Southwestern Mediterranean fisheries. Growth parameters were estimated for individuals inhabiting the Ria Formosa lagoon (Portugal). Length-frequency data were collected between November 2012 and March 2014 by using a visual census augmented with random sampling in 2014. To estimate the asymptotic length (L-infinity) and growth coefficient (K), 2 different growth models were fitted to the length frequency data for 1198 sea cucumbers: the nonseasonal von Bertalanffy and Hoenig seasonal von Bertalanffy models. A L-infinity of 69.9 cm and K of 0.88 were estimated by using the Hoenig function for seasonal growth. The value of 1.0 obtained for the parameter C of this function indicates reduction in growth during winter. The relatively high growth rate (K) of this species may have important implications for its survival, mainly in environments where conditions cause biological stress and oceanic disturbances but may also increase its potential as a candidate for aquaculture.CUMFISH project - Fundacao para a Ciencia e a Tecnologia (FCT, Portugal) [PTDC/MAR/119363/2010]; "Sea cucumber as new marine resource: potential for aquaculture" (CUMARSUR) project - Fundacao para a Ciencia e a Tecnologia (FCT, Portugal) [PTDC/MAR-BIO/5948/2014]; Fundacion para el Futuro de Colombia (Colfuturo); FCT Investigator Programme-Career Development [IF/00998/2014

Genetic differentiation among Parastichopus regalis populations in the Western Mediterranean Sea: potential effects from its fishery and current connectivity

Parastichopus regalis (Cuvier, 1817) is the most expensive seafood product on the Catalonian market (NE Spain), with prices at approximately 130 €/Kg (fresh weight). Despite its ecological and economic importance, biological and genetic information on this sea cucumber species is scarce. Here, we provide both the first insight on the genetic structure of P. regalis using sequences of cytochrome oxidase I (COI) and 16S genes and a morphological description of its population. Individual sea cucumbers were collected in six locations along the Spanish Mediterranean coast, including an area under fishery pressure (Catalonia). We found high haplotype diversity and low nucleotide diversity for both genes, with higher levels of genetic diversity observed in the COI gene. The population pairwise fixation index (FST), AMOVA and correspondence analysis (CA) based on the COI gene revealed significant genetic differentiation among some locations. However, further analysis using nuclear markers (e.g., microsatellites) is necessary to corroborate these results. Moreover, the genetic and morphological data may indicate fishery effects on the Catalonian population with a decrease in the size and weight averages and lower genetic diversity compared with locations that lack fishery pressure. For the appropriate management of this species, we suggest the following: 1) accurately assessing the stock status along the Spanish coasts; 2) studying the reproductive cycle of this target species and the establishment of a closed fishery season according to the reproductive cycle; and 3) establishing protected areas (i.e., not take zones) to conserve healthy populations and favour recruitment in the nearby areas

Elysia timida (Risso, 1818) three decades of research

Elysia timida (Risso, 1818) three decades of research.— During the last 30 years, studies on Elysia timida (Risso, 1818) have addressed various aspects related to food sources, photosynthetic efficiency of kleptoplasts, population genetics, chemical ecology and reproductive biology, both in the Mediterranean Sea and in the Mar Menor coastal lagoon. E. timida shows a strong specific interaction with Acetabularia acetabulum, retaining functional chloroplasts for at least 45 days and obtaining extra energy in periods when food resources are scarce. It shows control of parapodia, avoiding pigment photodestruction under oversaturated light conditions. The chemical ecological relationships established between E. timida and its potential predator fish, Thalassoma pavo, have also been evaluated, and it has been found that that the extracts of the mollusc contain repellent and unpalatable polypropionate compounds. Population genetics has demonstrated the genetic divergence between populations showing high and significant values of FST and genetic distances, and at least six privative alleles that are not shared with Mediterranean populations have been detected in lagoon populations. This sacoglossan is a poecilogonic species, and its lagoon populations show a greater reproductive output than Mediterranean populations; they produce a greater number of egg masses and embyros per individual, and the capsules have a wider diameter

Profitability of the Mediterranean and NE Atlantic new target sea cucumber species: some repercussions for their fisheries management

The term profitability can be understood as the ratio in percentage between fresh weight of animals and the dry weight of the obtained beche-de-mer depending on the body wall thickness of sea cucumbers and water content. Specimens decrease their weight and length considerably, when they are processed. However, scarce information about profitability of commercial sea cucumber from Mediterranean and NE Atlantic has been published until now. In this study, we focused on Holothuria tubulosa, Holothuria polii, Holothuria mammata and Holothuria arguinensis. For most of the species considered, a good lineal regression was found between eviscerated length (EL) vs eviscerated weight (EW), and EW vs dried weight (DW)however, H. arguinensis showed a high dispersal of data and low regression coefficients. The highest profitability (20.57 % +/- 4.40) was registered on H. arguinensis and the second one (15.36 % +/- 2.68) on H. polii. H. mammata and H. tubulosa showed lower profitability (11.95 % +/- 0.54 and 10.75 % +/- 0.55, respectively). Significant differences were found between profitability values of the studied species. Some implications for fisheries management were deduced from the relationships between profitability vs EW.CUMARSUR project - Fundacao para a Ciencia e a Tecnologia [PTDC/MAR-BIO/5948/2014]HOLREMAR project - Sayanes Mar S.L.FCTPortuguese Foundation for Science and Technology [IF/00998/2014, CCMAR/BI/0007/2015

Sea cucumbers, Holothuria arguinensis and H-mammata, from the southern Iberian Peninsula: variation in reproductive activity between populations from different habitats

New fisheries in the western Mediterranean and north eastern Atlantic target the sea cucumbers Holothuria arguinensis and H. mammata; however, lack of biological information hinders management decisions. Here, the reproductive biology of populations the two species was investigated in the southern Iberian Peninsula. Different populations located along a narrow latitudinal range displayed the same general reproductive pattern of summer-autumn spawning. However, significant differences in size, gonadal production and maturity profile between locations suggests the influence of site-specific factors. In Sagres and Ria Formosa H. arguinensis individuals were larger and had larger gonads than in Olhos de Agua, which had relatively more immature animals. The spawning and active gametogenesis periods were also longer in Sagres, possibly linked to specificity of food availability and tidal conditions. Ria Formosa also had larger H. mammata individuals with larger gonads than in Murcia and Olhos de Agua, possibly reflecting differences in feeding activity in different substrates (muddy/sandy vs rocky). Gametogenesis in H. arguinensis may be triggered by decreasing photoperiod and temperature, and spawning by increasing temperature. Altogether, these results, which include fecundity and size at first maturity, provide an important basis for the scientific management of sea cucumber fisheries in the region. (C) 2017 Elsevier B.V. All rights reserved

Highly polymorphic microsatellite markers for the Mediterranean endemic fan mussel Pinna nobilis

Pinna nobilis is an endemic bivalve of the Mediterranean Sea whose populations have decreased in the last decades due to human pressure; as a consequence, it was declared a protected species in 1992. Despite its conservation status, few genetic studies using mitochondrial markers have been published. We report on the isolation and development of 10 microsatellite loci for the fan mussel, Pinna nobilis. All loci (2 di-nucleotide, 5 tri-nucleotide, 2 tetra-nucleotide and 1 penta-nucleotide) are characterized by high levels of polymorphism in 76 individuals tested from two populations in the Balearic Islands (Spain, Western Mediterranean Sea). The number of alleles ranged from 4 to 24 and expected heterozygosity ranged from 0.4269 to 0.9400. These microsatellites could be very useful for the assessment of the genetic diversity and connectivity patterns of P. nobilis and the establishment of new conservation strategies

Genetic diversity across geographical scales in marine coastal ecosystems: Holothuria arguinensis a model species

Coastal lagoons are considered one of the most productive areas of our planet harboring a large variety of habitats. Their transitional character, between terrestrial and marine environments, creates a very particular ecosystem with important variations of its environmental conditions. The organisms that are able to survive on these ecosystems frequently experience strong selective pressures and constrictions to gene flowwith marine populations, which could contribute to genetic divergence among populations inhabiting coastal lagoon and marine environments. Therefore, the main aims of this study are to asses the genetic diversity and population structure of Holothuria arguinensis across geographical ranges, to test the hypothesis of coastal lagoons as hotspots of genetic diversity in the Ria Formosa lagoon, and to determine the role of exporting standing genetic variation from the lagoon to open sea and their implications to recent geographical expansion events. To reach these objectives, we investigate the genetic structure of H. arguinensis using two mitochondrial DNA markers (COI and 16S) at different spatial scales: i) small, inside Ria Formosa coastal lagoon, South Portugal; 2) large, including most of the geographical distribution of this species (South and Western Portuguese coast and Canary islands); these results will allow us to compare the genetic diversity of lagoonal and marine populations of H. arguinensis. On this framework, its recent geographical expansion events, recorded by Rodrigues (2012) and González-Wangüemert and Borrero-Pérez (2012), will be analyzed considering the potential contribution from lagoonal genetic pool. Non-significant genetic structure and high haplotypic diversity were found inside the Ria Formosa coastal lagoon. Both genes were unable to detect significant genetic differentiation among lagoonal and marine localities, suggesting a high rate of gene flow. The results supported our hypotheses that coastal lagoons are not only acting as hotspots of genetic diversity, but also contributing for the genetic variability of the species, working as a source of new haplotypes and enhancing adaptation to the high variable conditions. Different genetic patterns of colonization were found on H. arguinensis, but they must be studied more deeply

Habitat associations and seasonal abundance patterns of the sea cucumber Holothuria arguinensis at Ria Formosa coastal lagoon (South Portugal)

Sea cucumbers have an important economic value and high demand. Despite that, there is a lack of knowledge about their biology, ecology and habitat distribution patterns, which is very important for sea cucumber stock management, establishment and sizing of no-take zones, restocking actions and selection of grow-out areas. This work aimed to determine the density, abundance and habitat associations of Holothuria arguinensis for a better understanding of its distribution along the coastal lagoon Ria Formosa and to select suitable areas for grow-out. In the duration of a year, monthly visual censuses were performed in two locations at Ria Formosa along the intertidal zone. The number and length of H. arguinensis ' individuals found were registered, and the coverage of algae and seagrass was estimated. It was found that H. arguinensis was distributed along the lower intertidal zone, linked to Zostera noltii meadows on muddy and sandy bottoms. These areas showed the densest population and the largest sizes of H. arguinensis. However, during the warmer months, H. arguinensis seemed to migrate to deeper waters in the channels, to avoid exposition to high temperatures and solar/UV irradiance during low tides. Areas located in the lower intertidal zone with Z. noltii meadows on sand-muddy bottoms should be selected for H. arguinensis grow-out sites.This research was supported by the CUMARSUR (PTDC/MAR-BIO/5948/ 2014) projects funded by Fundação para Ciencia e Tecnologia (FCT, Portugal).info:eu-repo/semantics/publishedVersio

New highly polymorphic microsatellite markers for the aquatic angiosperm Ruppia cirrhosa reveal population diversity and differentiation

Ruppia cirrhosa is a clonal monoecious plant phylogenetically associated to seagrass families such as Posidoniaceae and Cymodoceaceae. It inhabits shallow waters that are important for productivity and as a biodiversity reservoir. In this study, we developed 10 polymorphic microsatellite loci for R. cirrhosa. Additionally, we obtained cross-amplification for two microsatellites previously described for Ruppia maritima. These 12 markers were tested in four R. cirrhosa populations from the southwest of Europe. The number of alleles per locus was high for most of the markers, ranging from 4 to 13. Two populations (Sicily and Cádiz) showed heterozygote deficit (p < 0.001). The four populations (Sicily, Murcia, Cádiz, and Tavira) were significantly differentiated (FST ≠ 0; p < 0.001), corroborating the usefulness of these microsatellites on R. cirrhosa population genetics

Epidemiology of skin ulceration disease in wild sea cucumber Holothuria arguinensis, a new aquaculture target species

Interest in wildlife epidemiology has increased in recent years. The control of diseases is critical for the survival of natural populations of economically valuable species. The present study is the first investigation of the etiology and epidemiology of skin ulceration disease in the sea cucumber Holothuria arguinensis, a new target species for fisheries and aquaculture in Europe. Bacterial cultures and molecular techniques were used to characterize this disease in animals collected during a survey across Ria Formosa Natural Park coastal lagoon in southern Portugal. Vibrio gigantis and V. crassostreae, which were both originally identified as disease agents in cultured oysters, were the most commonly isolated species of bacteria. Given that both sampling areas from which symptomatic H. arguinensis were collected were close to open oyster aquaculture facilities, this raises the possibility of an opportunistic infection, perhaps secondary to a decreased immune response caused by biotic or abiotic factors. An increase in prevalence of skin ulceration disease during the warmer season suggests that solar radiation and desiccation due to air exposure during low tide could be a cause of abiotic stress in the lagoon. Distributions of abundance and sizes of H. arguinensis in affected areas showed highest morbidity rates in adults. High fishery pressures throughout the study period could also cause elevations in prevalence and incidence rate of this disease. Skin ulcerative disease is endemic in this coastal lagoon. Disease monitoring is thus essential for the development of a conservation program to ensure the sustainability of fisheries and protection of natural resources