308 research outputs found

    New data on Gaidropsarus granti (Regan, 1903) (Gadiformes: Lotidae) from the Mediterranean Sea, with emphasis on its parasites

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    One adult male Azores rockling Gaidropsarus granti was captured by trammel nets at a depth of about 250 m near the coast of Arbatax (Sardinia, Italy) in early March 2007. This new report confirms a wide bathymetric range for this species. Macroscopic and microscopic analysis of the gonad showed a spent testis at a postspawning stage, with a weak residual spermatogenetic activity. Several body parts of Natantia (Crustacea: Decapoda) were detected in its stomach contents. Different developmental stages of 91 parasite specimens belonging to Arthropoda (Gnathiidae) and Nematoda (Anisakidae, Cystidicolidae and Philometridae) were found in its mouth and gills, and body cavity, respectively. Myxozoan spores were found in the gallbladder. Male and female nematodes of the genus Ichthyofilaria are reported for the first time from the Mediterranean Sea, and a very rare male of this genus is reported for the second time in the world. Parasitological results indicated that this Atlantic migrant probably entered the Mediterranean as an adult, suggesting for a non-indigenous species the possibilities of entering with natural parasites and/or acquiring native parasites in the introduced range

    DNA BARCODING OF FISH SPECIES FROM THE MEDITERRANEAN COAST OF ISRAEL

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    Accurately-classified genomic data in the Barcode of Life Data System (BOLD) database is vital to the protection and conservation of marine biodiversity in the Mediterranean Sea. The taxonomic classifications of 468 fish of 50 Mediterranean species were analyzed using the BOLD Identifier tool for variation in the cytochrome oxidase subunit I (COI) mitochondrial gene. Within species, nucleotide maximum composite likelihood was low with a mean of 0.0044±0.0008. Three presumptive species had significantly higher values e.g., Arnoglossus spp. (0.07), Torquigener flavimaculosus (0.013) and Boops boops (0.028). However, samples of Arnoglossus species were sub-classified into two groups that were finally identified as two different species e.g., Arnoglossus laterna and Arnoglossus thori. For the different species, BLAST searches against the BOLD database using our DNA barcoding data as the query sequences designated the most similar targets into groups. For each analyzed species, the similarity of the first and second threshold groups ranged from 95 to 99% and from 83 to 98%, respectively. Sequence based classification for the first threshold group was concordant with morphology-based identification. However, for 34 analyzed species (68%) overlaps of species between the two threshold groups hampered classification. Tree-based phylogeny analysis detected more than one cluster in the first threshold group for 22 out of 50 species, representing genetic subgroups and geographic origins. There was a tendency for higher conservation and lower number of clusters in the Lessepsian (Red Sea) migrant versus indigenous species

    Comparison of the Nasal Olfactory Organs of Various Species of Lizardfishes (Teleostei: Aulopiformes: Synodontidae) with Additional Remarks on the Brain

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    The olfactory organs of lizardfishes (Synodontidae) are situated in two capsules connected to the outside by incurrent and excurrent openings. The olfactory epithelium is in form of petal rosettes each composed of lamellae and a rephe, and bear olfactory receptor neurons, supporting cells and cells with kinocillia. The dimension of rosettes and lamellae, as well as the number of lamellae, increase with growth of the fish; until in adult fish these parameters remaine constant, species specific. In adult Synodus spp. and Trachinocephalus myops the rosettes are 3.5–4.0 mm long, with 5–8 lamellae, whereas in Saurida spp. they are 8.0 mm and possess up tp 22 lamellae. The number of ORN ranges from 2,600 on the smaller lamellae to 20,000 on the largest ones. The number of ORN/mm2 of olfactory is ca. 30,000 in Saurida spp. Thus the rosettes of S. macrolepis with 20 lamellae possess a total of ca. 170,000 ORN, whereas those of Sy. variegatus and T. myops with the average of six lamellae possess only ca. 50,000–65,000 ORN. The olfactory nerves lead from the rosettes to the olfactory balbs situated on the olfactory lobes. The differences among the species in olfactory organs are discussed in correlation with their distribution

    Perceived usefulness of smartphone medical apps as theoretical and clinical learning aids among medical students in Pakistan: a cross-sectional study

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    Background: Smartphone applications have become popular tools in clinical educational environments, particularly because they enhance learning in any setting through their accessibility. Despite students utilizing these apps in their daily learning, Pakistan’s medical education system has yet to strongly endorse them. Given the rising usage of medical applications among clinical year medical students and the wide range of apps accessible on contemporary devices aimed specifically at the student population, there is a lack of literature addressing the use of these apps on clinical learning in low- and middle-income countries (LMIC) such as Pakistan. Objectives: Our study aims to (1) assess the level of awareness among clinical-year medical students in Pakistan, of smartphone applications for academic purposes, (2) determine the usefulness of medical apps as educational tools for clinical-year medical students, in terms of enhancing overall patient-care skills and (3) identify barriers to the usage of apps among students who do not have them installed. Methods: This online questionnaire-based study includes clinical year medical students across four medical colleges (two private and two public sectors) in Pakistan. Participant identity was kept anonymous and informed consent was required to participate. A sample size of 360 was used based on previous studies in the UK and student estimates from chosen medical colleges. The questionnaire tool used consists of three sections; demographics and medical school information, perceived usefulness of medical smartphone apps on a Likert Scale and barriers to usage among students who do not have them installed. Results: 97.9% of the total study population chose to participate in the study. There was roughly an equal percentage of responses from each clinical year and 72% of students reported active use of medical apps of which the vast majority (48%) have one to two apps on their phones. Only 39% of students felt that their medical colleges encourage the use of smartphone apps for academic purposes. 54% of students use apps to look up medical criteria for disease processes and almost 42% use them to search medications. On a Likert scale of 1-5, improvement of clinical performance received highest average score among users (3.92, SD 1.1), followed by quick access to medical guidelines (3.83, SD 1.0). The most common reasons for nonuse of medical apps were medical colleges not offering subscriptions and not knowing how to utilize apps. Conclusion: Smartphone apps are widely used by clinical year medical students for academic purposes in our study. Despite lack of endorsement from their respective medical colleges, these apps are still popularly utilized for revision and research on disease criteria during clinics and rounds. Encouragement from the university has been identified as a significant barrier, however. Students who use smartphone apps reported an improvement in clinical performance overall; they were able to retrieve information quicker during rounds and noticed enhancements in formulating diagnoses and reading radiological images. In contrast, those not using these apps faced challenges with interpreting imaging results, recalling pharmacological properties of medications and developing differential diagnoses. Through these findings, we highlight the benefits of incorporating technological media into the undergraduate curriculum and hope medical universities from Pakistan can take inspiration

    Unraveling the multifaceted resilience of arsenic resistant bacterium Deinococcus indicus

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    Funding Information: This study was financially supported by the Portuguese Fundação para a Ciência e Tecnologia (FCT), grants PTDC/BIA-BQM/31317/2017, Project MOSTMICRO-ITQB with references UIDB/04612/2020 and UIDP/04612/2020, and LS4FUTURE Associated Laboratory (LA/P/0087/2020). This project has received funding from the European Union’s Horizon 2020 research and innovation program under grant agreement No. 857203. AG and BS are recipients of FCT grants SFRH/BD/06723/2020 and SFRH/BD/08066/2020, respectively. CR is recipient of FCT Institutional CEEC. Cryo-electron microscopy studies received partial support from the Weizmann Institute of Science (The Irving and Cherna Moskowitz Center for Nano and BioNano Imaging), and from the European Union (ERC-AdV grant, CryoSTEM, 101055413 to ME). This work benefited from access to the Weizmann Institute Electron Microscopy Unit, an Instruct-ERIC centre through the Access proposal PID: 19879. Funding Information: We would like to acknowledge the ALBA Synchrotron Light Facility with the collaboration of ALBA staff for the data collection of Di ArsC2 structures performed at BL13-XALOC beamline. The image analysis was made available thanks to the de Picciotto Cancer Cell Observatory In Memory of Wolfgang and Ruth Lesser of the MICC Life Sciences Core Facilities Weizmann Institute of Science Israel. Teresa Silva and Cristina Timóteo from the Microbial Cell Production and Protein Purification and Characterization Research facilities at ITQB-NOVA are acknowledged for providing the competent cells of Escherichia coli strains and to purify TEV protease. Publisher Copyright: Copyright © 2023 Gouveia, Salgueiro, Ranmar, Antunes, Kirchweger, Golani, Wolf, Elbaum, Matias and Romão.Arsenic (As) is a toxic heavy metal widely found in the environment that severely undermines the integrity of water resources. Bioremediation of toxic compounds is an appellative sustainable technology with a balanced cost-effective setup. To pave the way for the potential use of Deinococcus indicus, an arsenic resistant bacterium, as a platform for arsenic bioremediation, an extensive characterization of its resistance to cellular insults is paramount. A comparative analysis of D. indicus cells grown in two rich nutrient media conditions (M53 and TGY) revealed distinct resistance patterns when cells are subjected to stress via UV-C and methyl viologen (MV). Cells grown in M53 demonstrated higher resistance to both UV-C and MV. Moreover, cells grow to higher density upon exposure to 25 mM As(V) in M53 in comparison with TGY. This analysis is pivotal for the culture of microbial species in batch culture bioreactors for bioremediation purposes. We also demonstrate for the first time the presence of polyphosphate granules in D. indicus which are also found in a few Deinococcus species. To extend our analysis, we also characterized DiArsC2 (arsenate reductase) involved in arsenic detoxification and structurally determined different states, revealing the structural evidence for a catalytic cysteine triple redox system. These results contribute for our understanding into the D. indicus resistance mechanism against stress conditions.publishersversionpublishe

    Experimental characterization of nonlinear interference noise as a process of intersymbol interference

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    We demonstrate a method for experimentally characterizing the second order statistics of nonlinear interference noise (NLIN) as an intersymbol interference (ISI) process. The method enables measurement of the properties of high-order ISI coefficients, which have been largely overlooked in the past. The ability of measuring these statistics is imperative for designing effective NLIN mitigation schemes. The variance, temporal correlation times, and cross correlations of the various ISI coefficients are evaluated in several system implementations

    Experimental characterization of the time correlation properties of nonlinear interference noise

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    We demonstrate a method for experimentally characterizing the time-evolution statistics of nonlinear interference noise (NLIN). Strong temporal correlations, beyond the phase-noise NLIN component, are measured experimentally, for the first time. The ability of measuring these correlation is imperative for designing effective NLIN mitigation schemes

    Architecture of lipid droplets in endoplasmic reticulum is determined by phospholipid intrinsic curvature

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    Lipid droplets (LDs) store fats and play critical roles in lipid and energy homeostasis. They form between the leaflets of the endoplasmic reticulum (ER) membrane and consist of a neutral lipid core wrapped in a phospholipid monolayer with proteins. Two types of ER-LD architecture are thought to exist and be essential for LD functioning. Maturing LDs either emerge from the ER into the cytoplasm, remaining attached to the ER by a narrow membrane neck, or stay embedded in the ER and are surrounded by ER membrane. Here, we identify a lipid-based mechanism that controls which of these two architectures is favored. Theoretical modeling indicated that the intrinsic molecular curvatures of ER phospholipids can determine whether LDs remain embedded in or emerge from the ER; lipids with negative intrinsic curvature such as diacylglycerol (DAG) and phosphatidylethanolamine favor LD embedding, while those with positive intrinsic curvature, like lysolipids, support LD emergence. This prediction was verified by altering the lipid composition of the ER in S. cerevisiae using mutants and the addition of exogenous lipids. We found that fat-storage-inducing transmembrane protein 2 (FIT2) homologs become enriched at sites of LD generation when biogenesis is induced. DAG accumulates at sites of LD biogenesis, and FIT2 proteins may promote LD emergence from the ER by reducing DAG levels at these sites. Altogether, our findings suggest that cells regulate LD integration in the ER by modulating ER lipid composition, particularly at sites of LD biogenesis and that FIT2 proteins may play a central role in this process

    Hydrochloride Salt of the GABAkine KRM-II-81

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    Imidazodiazepine (5-(8-ethynyl-6-(pyridin-2-yl)-4H-benzo[f]imidazole[1,5-α][1,4]diazepin-3-yl) oxazole or KRM-II-81) is a potentiator of GABAA receptors (a GABAkine) undergoing preparation for clinical development. KRM-II-81 is active against many seizure and pain models in rodents, where it exhibits improved pharmacological properties over standard-of-care agents. Since salts can be utilized to create opportunities for increased solubility, enhanced absorption, and distribution, as well as for efficient methods of bulk synthesis, a hydrochloride salt of KRM-II-81 was prepared. KRM-II-81·HCl was produced from the free base with anhydrous hydrochloric acid. The formation of the monohydrochloride salt was confirmed by X-ray crystallography, as well as 1H NMR and 13C NMR analyses. High water solubility and a lower partition coefficient (octanol/water) were exhibited by KRM-II-81·HCl as compared to the free base. Oral administration of either KRM-II-81·HCl or the free base resulted in high concentrations in the brain and plasma of rats. Oral dosing in mice significantly increased the latency to both clonic and tonic convulsions and decreased pentylenetetrazol-induced lethality. The increased water solubility of the HCl salt enables intravenous dosing and the potential for higher concentration formulations compared with the free base without impacting anticonvulsant potency. Thus, KRM-II-81·HCl adds an important new compound to facilitate the development of these imidazodiazepines for clinical evaluation

    A lionfish (Pterois miles) invasion has begun in the Mediterranean Sea

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    Until now, few sightings of the alien lionfish Pterois miles have been reported in the Mediterranean and it was questionable whether the species could invade this region like it has in the western Atlantic. Here, we present evidence from divers and fishermen that lionfish have recently increased in abundance and within a year colonised almost the entire south eastern coast of Cyprus, likely due to sea surface warming. At least 23 different fish are reported of which 6 were removed. Groups of lionfish exhibiting mating behaviour have been noted for the first time in the Mediterranean. Managers need this information and should alert stakeholders to the potential ecological and socio-economic impacts that may arise from a lionfish invasion. Actions could involve incentives to engage divers and fishermen in lionfish removal programmes, as these have worked well at shallow depths in the Caribbean. Given that the Suez Canal has recently been widened and deepened, measures will need to be put in place to help prevent further invasion
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