Focused Examination of the Intestinal lamina Propria Yields Greater Molecular Insight into Mechanisms Underlying SIV Induced Immune Dysfunction

Background: The Gastrointestinal (GI) tract is critical to AIDS pathogenesis as it is the primary site for viral transmission and a major site of viral replication and CD4 + T cell destruction. Consequently GI disease, a major complication of HIV/SIV infection can facilitate translocation of lumenal bacterial products causing localized/systemic immune activation leading to AIDS progression. Methodology/Principal Findings: To better understand the molecular mechanisms underlying GI disease we analyzed global gene expression profiles sequentially in the intestine of the same animals prior to and at 21 and 90d post SIV infection (PI). More importantly we maximized information gathering by examining distinct mucosal components (intraepithelial lymphocytes, lamina propria leukocytes [LPL], epithelium and fibrovascular stroma) separately. The use of sequential intestinal resections combined with focused examination of distinct mucosal compartments represents novel approaches not previously attempted. Here we report data pertaining to the LPL. A significant increase (61.7-fold) in immune defense/inflammation, cell adhesion/migration, cell signaling, transcription and cell division/differentiation genes were observed at 21 and 90d PI. Genes associated with the JAK-STAT pathway (IL21, IL12R, STAT5A, IL10, SOCS1) and T-cell activation (NFATc1, CDK6, Gelsolin, Moesin) were notably upregulated at 21d PI. Markedly downregulated genes at 21d PI included IL17D/IL27 and IL28B/IFNc3 (anti-HIV/viral), activation induced cytidine deaminase (B-cell function) an

Multi-messenger observations of a binary neutron star merger

On 2017 August 17 a binary neutron star coalescence candidate (later designated GW170817) with merger time 12:41:04 UTC was observed through gravitational waves by the Advanced LIGO and Advanced Virgo detectors. The Fermi Gamma-ray Burst Monitor independently detected a gamma-ray burst (GRB 170817A) with a time delay of ~1.7 s with respect to the merger time. From the gravitational-wave signal, the source was initially localized to a sky region of 31 deg2 at a luminosity distance of 40+8-8 Mpc and with component masses consistent with neutron stars. The component masses were later measured to be in the range 0.86 to 2.26 Mo. An extensive observing campaign was launched across the electromagnetic spectrum leading to the discovery of a bright optical transient (SSS17a, now with the IAU identification of AT 2017gfo) in NGC 4993 (at ~40 Mpc) less than 11 hours after the merger by the One- Meter, Two Hemisphere (1M2H) team using the 1 m Swope Telescope. The optical transient was independently detected by multiple teams within an hour. Subsequent observations targeted the object and its environment. Early ultraviolet observations revealed a blue transient that faded within 48 hours. Optical and infrared observations showed a redward evolution over ~10 days. Following early non-detections, X-ray and radio emission were discovered at the transient’s position ~9 and ~16 days, respectively, after the merger. Both the X-ray and radio emission likely arise from a physical process that is distinct from the one that generates the UV/optical/near-infrared emission. No ultra-high-energy gamma-rays and no neutrino candidates consistent with the source were found in follow-up searches. These observations support the hypothesis that GW170817 was produced by the merger of two neutron stars in NGC4993 followed by a short gamma-ray burst (GRB 170817A) and a kilonova/macronova powered by the radioactive decay of r-process nuclei synthesized in the ejecta

Small-scale hydrological variation determines landscape CO2 fluxes in the high arctic

We explored the influence of small-scale spatial variation in soil moisture on CO2 fluxes in the high Arctic. Of five sites forming a hydrological gradient, CO2 was emitted from the three driest sites and only the wettest site was a net sink of CO2. Soil moisture was a good predictor of net ecosystem exchange (NEE). Higher gross ecosystem photosynthesis (GEP) was linked to higher bryophyte biomass and activity in response to the moisture conditions. Ecosystem respiration (R e) rates increased with soil moisture until the soil became anaerobic and then R e decreased. At well-drained sites R e was driven by GEP, suggesting substrate and moisture limitation of soil respiration. We propose that spatial variability in soil moisture is a primary driver of NEE

Identifying the Salinity Thresholds that Impact Greenhouse Gas Production in Subtropical Tidal Freshwater Marsh Soils

Increasing salinity due to sea level rise is an important factor influencing biogeochemical processes in estuarine wetlands, with the potential to impact greenhouse gas (GHG) emissions. However, there is little consensus regarding what salinity thresholds will significantly alter the production of GHGs or the physiochemical properties of wetland soils. This study used a fine-scale salinity gradient to determine the impact of seawater concentration on the potential production of CH4, CO2 and N2O and associated soil properties using bottle incubations of tidal freshwater marsh soils from the Min River estuary, SE China. Potential CH4 production was unaffected by salinities from 0 to 7.5‰, but declined significantly at 10‰ and above. Potential CO2 production was stimulated at intermediate salinities (5 to 7.5‰), but inhibited by salinities ≥15‰, while potential N2O production was unaffected by salinity. In contrast, soil dissolved organic carbon and NH4+-N generally increased with salinity. Overall, this research indicates salinities of ~10–15‰ represent an important tipping point for biogeochemical processes in wetlands. Above this threshold, carbon mineralization is reduced and may promote vertical soil accretion in brackish and salinity wetlands. Meanwhile, low-level saltwater intrusion may leave wetlands vulnerable to submergence due to accelerated soil organic carbon loss